; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001392 (gene) of Snake gourd v1 genome

Gene IDTan0001392
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationLG04:61380961..61383513
RNA-Seq ExpressionTan0001392
SyntenyTan0001392
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]1.7e-9697.27Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

TYK23826.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]8.4e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMNEKDPFR ELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]2.2e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]4.9e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]6.4e-9696.17Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMN+KDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein1.1e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X18.2e-9797.27Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X14.1e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLV+MLKKMNEKDPFR ELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1DLF0 U3 small nucleolar ribonucleoprotein protein IMP35.3e-9697.27Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP32.4e-9696.72Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYHITGRDDYKKYSS+CRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIR+GPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp31.2e-4748.09Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  +  HR+  VM RYHI+ R++Y+KY+ +C   ++L   L  ++  DPFRL+    LLEKL+++G++P++  + ++ ++
Subjt:  MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+R+GP  +TDPA+LVTR++EDF+TW D+SKIKR + +YNDKLDDYD +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

P32899 U3 small nucleolar ribonucleoprotein protein IMP37.7e-5252.22Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL
        +RKLK HEQKLLKKV+FLEWK++ GHR+ QVM  YHI  R+DY KY+ +C  +++L + L  +   DPFR +  + LL+KLY +GV+ T+  + +L +++
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+R+GP  + DPA+LVTRNMED++TWVD+SKIK+ +L+Y +++DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP32.6e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+R+GP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP38.8e-5656.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R++Y +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+R+GP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP33.3e-5556.67Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R V++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+R+GP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S41.7e-0623.61Show/hide
Query:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSS
        A+ +  +   I Q HIR+G + V  P+F+V  + +  I +  +S
Subjt:  AEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein9.0e-8076.8Show/hide
Query:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRKLK+HE+KL+KKVNFLEWKREG HRE ++ +RYH+  RDDYKKYS LCR VQKL +++K+M+  DPFR+++T+ LLEKLYN+GVIPTR+SL L +RLS
Subjt:  MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+R+GPET+TDPAFLVTRNMEDFITWVDSSKIKRKVL+YND LDDYD +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

AT5G39850.1 Ribosomal protein S41.0e-0625.38Show/hide
Query:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +       ++     L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRIGPETVTDPAFLV
        A+ +  A   I Q HIR+G + V  P+F+V
Subjt:  AEHLREAVTYIEQGHIRIGPETVTDPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTAAAATTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGCCACAGAGAAGCCCAAGTCATGCATCGCTATCACAT
CACCGGCCGAGACGATTACAAAAAGTATTCGAGCTTGTGCCGGGGGGTTCAGAAGCTCGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAATTGA
CCGAGAAGCTCCTCGAAAAGTTGTACAATATTGGCGTGATACCGACCCGACAGAGCTTGAATTTATGTGATCGTTTGTCAGTGTCATCCTTTTGCAGACGAAGACTATCG
ACGGTGTTGGTACGTTTGAAGTTTGCTGAACACTTGAGGGAAGCTGTTACATACATCGAGCAAGGGCACATTAGAATTGGTCCAGAGACGGTTACCGATCCAGCATTTCT
AGTTACAAGGAATATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCT
GA
mRNA sequenceShow/hide mRNA sequence
TTAGGGTTAAATCTTTTAAACCCTAAAACAAAAACCATTCTTTCCTAGTTTCCTCTCACTCTCTGCCGTTTTCTACCGTCGCCGATGCCGAGAGACTCTTAAATATTCTC
ACTCGCTTGCCCAACTCGCCGCCGCCGATCCCGTTCTCCCTTTCTCCGGGAGACTCTTGTTTTGTACGACACCGAGAACTTCTTCAACTGCGAGGTGTATTGAGGTGAAA
CAGAAGAAGGGATTATGAGGAAGCTAAAATTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGCCACAGAGAAGCCCAAGTCATG
CATCGCTATCACATCACCGGCCGAGACGATTACAAAAAGTATTCGAGCTTGTGCCGGGGGGTTCAGAAGCTCGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTT
TCGATTGGAATTGACCGAGAAGCTCCTCGAAAAGTTGTACAATATTGGCGTGATACCGACCCGACAGAGCTTGAATTTATGTGATCGTTTGTCAGTGTCATCCTTTTGCA
GACGAAGACTATCGACGGTGTTGGTACGTTTGAAGTTTGCTGAACACTTGAGGGAAGCTGTTACATACATCGAGCAAGGGCACATTAGAATTGGTCCAGAGACGGTTACC
GATCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGA
TGCCATGAACTGCTGAGATGAGTTATTTCCAAGTTTTGTTCCTTTTCATCACAACCTCTTGTATGAATTATTTCTCTGGCCCTCCTAATTGAAATGGCTAGTTAATGTAG
CATCAGTTTTCTCCCTTATCTTCTAATCAATATATAGTTTTACATTGTTTTATATTACAAGCTTGATATCTCAGCTTCATGGATGTCTCTTTGTTGGGA
Protein sequenceShow/hide protein sequence
MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRIGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC