| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008461807.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Cucumis melo] | 6.3e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+NAFE EFA+ SRDY
Subjt: LRNAFEVEFARFSRDY
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| XP_011651771.1 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [Cucumis sativus] | 1.3e-57 | 97.41 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+NAFE EFA+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| XP_022152550.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Momordica charantia] | 2.4e-56 | 94.83 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+NAFE E A+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| XP_022949378.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Cucurbita moschata] | 4.9e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
LRN FE EFA+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| XP_022998503.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Cucurbita maxima] | 3.1e-56 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDE VLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
LRN FE EFA+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCD5 RNA_pol_L_2 domain-containing protein | 6.2e-58 | 97.41 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+NAFE EFA+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| A0A1S3CG10 DNA-directed RNA polymerases II, IV and V subunit 11 | 3.1e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+NAFE EFA+ SRDY
Subjt: LRNAFEVEFARFSRDY
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| A0A6J1DE90 DNA-directed RNA polymerases II, IV and V subunit 11 | 1.2e-56 | 94.83 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+NAFE E A+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| A0A6J1GBY1 DNA-directed RNA polymerases II, IV and V subunit 11 | 2.4e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
LRN FE EFA+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| A0A6J1KGX7 DNA-directed RNA polymerases II, IV and V subunit 11 | 1.5e-56 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDE VLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
LRN FE EFA+FSRDY
Subjt: LRNAFEVEFARFSRDY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P52435 DNA-directed RNA polymerase II subunit RPB11-a | 7.1e-27 | 52.34 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEV
L F V
Subjt: LRNAFEV
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| Q32P79 DNA-directed RNA polymerase II subunit RPB11 | 7.1e-27 | 52.34 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEV
L F V
Subjt: LRNAFEV
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| Q38859 DNA-directed RNA polymerases II, IV and V subunit 11 | 4.0e-54 | 86.21 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+N FE E A+FS +
Subjt: LRNAFEVEFARFSRDY
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| Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 | 4.2e-27 | 49.52 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDR+E FV+P+G KKV+ RDTKI NA+ FTI +E+HTIGN++RMQL D++++FAGY++PHPL++ + +RI T + ++P++ +++ L +E
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAF
L N+F
Subjt: LRNAF
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| Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 | 2.1e-26 | 52.83 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK+ E DTK+ NAA FTI +E+HT+GN++R QL +D NVLFAGYK+PHPL++K ++RI TT+ SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFE
F+
Subjt: LRNAFE
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G29540.1 RNApolymerase 14 kDa subunit | 1.5e-08 | 30.59 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEVEFARF
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+R+ F+ A +
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEVEFARF
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| AT2G29540.2 RNApolymerase 14 kDa subunit | 1.5e-08 | 30.59 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEVEFARF
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+R+ F+ A +
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEVEFARF
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| AT3G52090.1 DNA-directed RNA polymerase, RBP11-like | 2.8e-55 | 86.21 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEVEFARFSRDY
L+N FE E A+FS +
Subjt: LRNAFEVEFARFSRDY
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| AT3G52090.2 DNA-directed RNA polymerase, RBP11-like | 1.6e-50 | 68.49 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVR
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
Query: ----IHTTSQSSPMQAYNQAINDLDKELDHLRNAFEVEFARFSRDY
IHTTSQSSPMQAYNQAINDLDKELD+L+N FE E A+FS +
Subjt: ----IHTTSQSSPMQAYNQAINDLDKELDHLRNAFEVEFARFSRDY
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