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Tan0001398 (gene) of Snake gourd v1 genome

Gene IDTan0001398
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG05:34202630..34202923
RNA-Seq ExpressionTan0001398
SyntenyTan0001398
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608573.1 hypothetical protein SDJN03_01915, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2876.04Show/hide
Query:  MAAVTLTSVVRFLFIGILTFIIIITAISETAAASRLLSPLSAAPLTTPHGIHESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHEVE
        MA VTL S +  LF G++TF  IITA+S+TAA SRLLSPLSAAP TTPHGIHES+VK DHSRF  V SEIVADYG+WNP PVFGGGYADPIPHEV+
Subjt:  MAAVTLTSVVRFLFIGILTFIIIITAISETAAASRLLSPLSAAPLTTPHGIHESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHEVE
PON51988.1 Transmembrane protein [Parasponia andersonii]2.8e-0540Show/hide
Query:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPH
        ++  III+T +S  AA  +  L P+  AP  +   +   E  ++ D    ++ Q E + DYGFWNP P FGGG+A PIPH
Subjt:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPH
PON91008.1 Transmembrane protein [Trema orientale]1.5e-0643.02Show/hide
Query:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHE--VEE
        ++  III+T +S TAAA +  L P+  AP  +   +   E  ++ D    N+   E + DYGFWNP P FGGG+A PIPH   VEE
Subjt:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHE--VEE
TrEMBL top hitse value%identityAlignment
A0A2P5BT75 Transmembrane protein1.3e-0540Show/hide
Query:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPH
        ++  III+T +S  AA  +  L P+  AP  +   +   E  ++ D    ++ Q E + DYGFWNP P FGGG+A PIPH
Subjt:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPH
A0A2P5EZP1 Transmembrane protein7.1e-0743.02Show/hide
Query:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHE--VEE
        ++  III+T +S TAAA +  L P+  AP  +   +   E  ++ D    N+   E + DYGFWNP P FGGG+A PIPH   VEE
Subjt:  ILTFIIIITAISETAAASR-LLSPLSAAPLTTPHGIH--ESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHE--VEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28375.1 unknown protein1.1e-0459.26Show/hide
Query:  EIVADYGFWNPNPVFGGG--YADPIPH
        ++  DYGFWNP+PV+GGG  Y  P+PH
Subjt:  EIVADYGFWNPNPVFGGG--YADPIPH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGTGACACTCACCTCAGTCGTTCGCTTTTTATTCATCGGTATATTGACGTTCATTATTATAATAACAGCGATATCCGAAACAGCTGCAGCATCGCGTTTACT
CTCGCCATTATCAGCTGCACCTTTGACAACTCCTCATGGCATCCATGAATCTCAGGTGAAGGAAGATCACAGTCGTTTCAATAATGTTCAGTCAGAAATTGTGGCTGACT
ATGGCTTCTGGAATCCGAACCCCGTGTTCGGGGGAGGATATGCAGACCCCATTCCACACGAAGTCGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAGTGACACTCACCTCAGTCGTTCGCTTTTTATTCATCGGTATATTGACGTTCATTATTATAATAACAGCGATATCCGAAACAGCTGCAGCATCGCGTTTACT
CTCGCCATTATCAGCTGCACCTTTGACAACTCCTCATGGCATCCATGAATCTCAGGTGAAGGAAGATCACAGTCGTTTCAATAATGTTCAGTCAGAAATTGTGGCTGACT
ATGGCTTCTGGAATCCGAACCCCGTGTTCGGGGGAGGATATGCAGACCCCATTCCACACGAAGTCGAAGAATGA
Protein sequenceShow/hide protein sequence
MAAVTLTSVVRFLFIGILTFIIIITAISETAAASRLLSPLSAAPLTTPHGIHESQVKEDHSRFNNVQSEIVADYGFWNPNPVFGGGYADPIPHEVEE