; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001400 (gene) of Snake gourd v1 genome

Gene IDTan0001400
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin regulated protein
Genome locationLG05:70569691..70571409
RNA-Seq ExpressionTan0001400
SyntenyTan0001400
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]3.2e-4275.65Show/hide
Query:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGT
        MAVR    LLLLGVF+FLCLSQVSS+GY EE  +  EY+E ++RG NRRLMQ IDCG +C+RRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGT
Subjt:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGT

Query:  CYTTMTTHANKTKCP
        CYT+MTTH N+TKCP
Subjt:  CYTTMTTHANKTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]4.7e-4170.63Show/hide
Query:  MAVR---FLLLLGVFIFLCLS--------QVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPP
        MAVR    LLLLGVF+FLCLS        Q+SSDGY +++  M E E    +V+RG NRRLMQ IDCG ECKRRCGAHSRP RC+RACGTCC RC+CVPP
Subjt:  MAVR---FLLLLGVFIFLCLS--------QVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPP

Query:  GTSGNREMCGTCYTTMTTHANKTKCP
        GTSGNREMCGTCYT+MTTH NKTKCP
Subjt:  GTSGNREMCGTCYTTMTTHANKTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]2.9e-4375.42Show/hide
Query:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREM
        MAVR    LLLLGVF+FLCLSQ+SSDGY +++  M E E    +V+RG NRRLMQ IDCG ECKRRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREM
Subjt:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREM

Query:  CGTCYTTMTTHANKTKCP
        CGTCYT+MTTH NKTKCP
Subjt:  CGTCYTTMTTHANKTKCP

XP_022994681.1 snakin-2-like [Cucurbita maxima]3.1e-3769.83Show/hide
Query:  MAVRFLLLLGVFIFLCLSQVS-----SDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCG
        MA RFLLLLGV  FLCLS  S     S G+       G     VR PN R+M  IDCGWECKRRCGAHSRP RC+R CGTCCLRC CVPPGTSGNREMCG
Subjt:  MAVRFLLLLGVFIFLCLSQVS-----SDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCG

Query:  TCYTTMTTHANKTKCP
        TCYT MTTH NKTKCP
Subjt:  TCYTTMTTHANKTKCP

XP_038895055.1 snakin-2-like [Benincasa hispida]1.1e-4278.26Show/hide
Query:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGT
        MAVR    LLLLG+F+ L LSQVSSDGY EE     EY+E V+RG NRRLMQNI+CGWECKRRCGAHSRP RC+RACGTCC RCKCVP GTSGNREMCGT
Subjt:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGT

Query:  CYTTMTTHANKTKCP
        CYT MTTH NKTKCP
Subjt:  CYTTMTTHANKTKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LW79 Uncharacterized protein1.6e-4275.65Show/hide
Query:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGT
        MAVR    LLLLGVF+FLCLSQVSS+GY EE  +  EY+E ++RG NRRLMQ IDCG +C+RRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGT
Subjt:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGT

Query:  CYTTMTTHANKTKCP
        CYT+MTTH N+TKCP
Subjt:  CYTTMTTHANKTKCP

A0A1S3AVJ9 snakin-2-like isoform X21.4e-4375.42Show/hide
Query:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREM
        MAVR    LLLLGVF+FLCLSQ+SSDGY +++  M E E    +V+RG NRRLMQ IDCG ECKRRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREM
Subjt:  MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREM

Query:  CGTCYTTMTTHANKTKCP
        CGTCYT+MTTH NKTKCP
Subjt:  CGTCYTTMTTHANKTKCP

A0A1S3AW57 snakin-2-like isoform X12.3e-4170.63Show/hide
Query:  MAVR---FLLLLGVFIFLCLS--------QVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPP
        MAVR    LLLLGVF+FLCLS        Q+SSDGY +++  M E E    +V+RG NRRLMQ IDCG ECKRRCGAHSRP RC+RACGTCC RC+CVPP
Subjt:  MAVR---FLLLLGVFIFLCLS--------QVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPP

Query:  GTSGNREMCGTCYTTMTTHANKTKCP
        GTSGNREMCGTCYT+MTTH NKTKCP
Subjt:  GTSGNREMCGTCYTTMTTHANKTKCP

A0A6J1CAF9 snakin-2-like3.4e-3773.21Show/hide
Query:  MAV-RFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYT
        MAV RFLLLLGV +FLCLS+V  +G  EE        E VRGPNRRLM+ IDCG  CKRRCGAHSRPK C+RACGTCC RC+CVPPGTSGNRE+CG CYT
Subjt:  MAV-RFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYT

Query:  TMTTHANKTKCP
         MTTH NKTKCP
Subjt:  TMTTHANKTKCP

A0A6J1JZU9 snakin-2-like1.5e-3769.83Show/hide
Query:  MAVRFLLLLGVFIFLCLSQVS-----SDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCG
        MA RFLLLLGV  FLCLS  S     S G+       G     VR PN R+M  IDCGWECKRRCGAHSRP RC+R CGTCCLRC CVPPGTSGNREMCG
Subjt:  MAVRFLLLLGVFIFLCLSQVS-----SDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCG

Query:  TCYTTMTTHANKTKCP
        TCYT MTTH NKTKCP
Subjt:  TCYTTMTTHANKTKCP

SwissProt top hitse value%identityAlignment
P46687 Gibberellin-regulated protein 34.1e-1641.44Show/hide
Query:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT
        MA+    L+ + I  CL+      ++ E  ++G  E VV+         IDCG  CK RC   SRP  C+RAC +CC RC CVPPGT+GN  +C  CY +
Subjt:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT

Query:  MTTHANKTKCP
        +TT   + KCP
Subjt:  MTTHANKTKCP

P46688 Gibberellin-regulated protein 23.2e-1643.24Show/hide
Query:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT
        MAV    L+ + I +CL+      ++ +  ++G  E VV+         IDCG  CK RC   SR K C+RAC +CC RC CVPPGTSGN  +C  CY +
Subjt:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT

Query:  MTTHANKTKCP
        +TTH  + KCP
Subjt:  MTTHANKTKCP

Q8GWK5 Gibberellin-regulated protein 91.2e-1542.11Show/hide
Query:  VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTC
        V F+ L+  F+ L   L+++SS   +E        +E      +R   +   I+CG  C RRC   SR K C RACG+CC +C+CVPPGTSGN   C  C
Subjt:  VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHANKTKCP
        Y ++ TH NK KCP
Subjt:  YTTMTTHANKTKCP

Q93X17 Snakin-22.6e-1864.06Show/hide
Query:  QNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP
        + IDCG  C  RC   SRP+ C RACGTCC RC CVPPGTSGN E C  CY ++TTH NK KCP
Subjt:  QNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP

Q9LFR3 Gibberellin-regulated protein 142.2e-1762.9Show/hide
Query:  IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP
        IDC   C  RCG HSR   C+RAC TCC RCKCVPPGT GN+E CG+CY  M T   K+KCP
Subjt:  IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein8.5e-1742.11Show/hide
Query:  VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTC
        V F+ L+  F+ L   L+++SS   +E        +E      +R   +   I+CG  C RRC   SR K C RACG+CC +C+CVPPGTSGN   C  C
Subjt:  VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHANKTKCP
        Y ++ TH NK KCP
Subjt:  YTTMTTHANKTKCP

AT1G22690.2 Gibberellin-regulated family protein8.5e-1742.11Show/hide
Query:  VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTC
        V F+ L+  F+ L   L+++SS   +E        +E      +R   +   I+CG  C RRC   SR K C RACG+CC +C+CVPPGTSGN   C  C
Subjt:  VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTC

Query:  YTTMTTHANKTKCP
        Y ++ TH NK KCP
Subjt:  YTTMTTHANKTKCP

AT4G09600.1 GAST1 protein homolog 32.9e-1741.44Show/hide
Query:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT
        MA+    L+ + I  CL+      ++ E  ++G  E VV+         IDCG  CK RC   SRP  C+RAC +CC RC CVPPGT+GN  +C  CY +
Subjt:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT

Query:  MTTHANKTKCP
        +TT   + KCP
Subjt:  MTTHANKTKCP

AT4G09610.1 GAST1 protein homolog 22.2e-1743.24Show/hide
Query:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT
        MAV    L+ + I +CL+      ++ +  ++G  E VV+         IDCG  CK RC   SR K C+RAC +CC RC CVPPGTSGN  +C  CY +
Subjt:  MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTT

Query:  MTTHANKTKCP
        +TTH  + KCP
Subjt:  MTTHANKTKCP

AT5G14920.1 Gibberellin-regulated family protein1.6e-1862.9Show/hide
Query:  IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP
        IDC   C  RCG HSR   C+RAC TCC RCKCVPPGT GN+E CG+CY  M T   K+KCP
Subjt:  IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCGTTTCCTTCTTCTTCTGGGAGTTTTCATCTTCCTTTGCCTTTCACAGGTATCTTCTGATGGATACTCAGAAGAACAAGAAGAGATGGGAGAGTATGAGGA
AGTGGTGAGAGGGCCAAACAGAAGGCTGATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCATTCGAGGCCGAAGCGGTGCGTAAGGGCGTGCG
GGACGTGCTGCTTGCGGTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACACATGCCAACAAGACCAAGTGC
CCTTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTGAAAAGCCATGGCGGTTCGTTTCCTTCTTCTTCTGGGAGTTTTCATCTTCCTTTGCCTTTCACAGGTATCTTCTGATGGATACTCAGAAGAACAAGAAGAGATGG
GAGAGTATGAGGAAGTGGTGAGAGGGCCAAACAGAAGGCTGATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCATTCGAGGCCGAAGCGGTGC
GTAAGGGCGTGCGGGACGTGCTGCTTGCGGTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACACATGCCAA
CAAGACCAAGTGCCCTTAA
Protein sequenceShow/hide protein sequence
MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKC
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