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Tan0001404 (gene) of Snake gourd v1 genome

Gene IDTan0001404
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L31
Genome locationLG04:83175483..83179949
RNA-Seq ExpressionTan0001404
SyntenyTan0001404
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015888290.1 60S ribosomal protein L31 [Ziziphus jujuba]3.8e-5289.26Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        M DK++K RK EVVTREYTVNLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVP+RVRVRIARKRNDEED KEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAEV  EGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

XP_022152572.1 60S ribosomal protein L31 [Momordica charantia]6.2e-5595.04Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVP+RVRVRIA+KRNDEEDAKEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAEV AEGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

XP_023525745.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]6.2e-5595.04Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVP+RVRVRIARKRNDEEDAKEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAEV AEG KGL T VIDEE+
Subjt:  VAEVSAEGLKGLGTMVIDEED

XP_031401093.1 60S ribosomal protein L31 [Punica granatum]1.3e-5287.6Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MAD+ +K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVP+RVRVR+ARKRNDEEDAKEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAE+  EGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

XP_038903425.1 60S ribosomal protein L31 [Benincasa hispida]4.7e-5595.04Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQ AMGTTDVRVDVKLNK+IWSRGIRSVP+RVRVRIARKRNDEEDAKEEFYSL+T
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAEV AEGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

TrEMBL top hitse value%identityAlignment
A0A218X1Y2 60S ribosomal protein L316.3e-5387.6Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MAD+ +K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVP+RVRVR+ARKRNDEEDAKEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAE+  EGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

A0A6J1DGM1 60S ribosomal protein L313.0e-5595.04Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVP+RVRVRIA+KRNDEEDAKEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAEV AEGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

A0A6P4A0Q9 60S ribosomal protein L311.8e-5289.26Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        M DK++K RK EVVTREYTVNLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVP+RVRVRIARKRNDEED KEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAEV  EGLKGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

A0A7N2LCX9 Uncharacterized protein5.3e-5286.78Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        M DK +K RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVP+RVRVRIARKRNDEEDAKEEF+SLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAE+  EGLKGLGT VI+EED
Subjt:  VAEVSAEGLKGLGTMVIDEED

I3NMM3 60S ribosomal protein L31A1.8e-5288.43Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        M +K+AK RK EVVTREYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVP+RVRVRIARKRNDEEDAKEEFYSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        V EV +EG KGLGT VIDEED
Subjt:  VAEVSAEGLKGLGTMVIDEED

SwissProt top hitse value%identityAlignment
O65071 60S ribosomal protein L312.9e-4776.27Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAE
        +  K+R++EV TREYT+NLH+RLHGCTFKK APKA+KE+RKFAQ AMGTTDVR+DVKLNK +WSRGIRSVP+R+RVRI+RKRNDEEDAK+E YS+VTVAE
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAE

Query:  VSAEGLKGLGTMVIDEED
        V  EGL GLGT +I+EED
Subjt:  VSAEGLKGLGTMVIDEED

P46290 60S ribosomal protein L311.8e-4981.82Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        M+DK+ K RK EVVTREYT+NLHKRLH CTFKKKAP AIKE+RKFAQ AMGT DVRVDVKLNK IWSRGIRSVP+RVRVRIARKRND+EDAKEE YSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAE+ A+GLKGLGT +I++ED
Subjt:  VAEVSAEGLKGLGTMVIDEED

P51420 60S ribosomal protein L31-32.2e-4779.13Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA
        K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IWS+GIR  P+R+RVR+ARKRND+EDAKEEF+SLVTVAE+ A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA

Query:  EGLKGLGTMVIDEED
        EGL GLGT VI+EED
Subjt:  EGLKGLGTMVIDEED

Q9M573 60S ribosomal protein L313.5e-5385.12Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT
        MADK +K RK EVV+REYT+NLHKRLHGCTFKKKAPKAIKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVP+R+RVRIARKRND+EDAKEE YSLVT
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVT

Query:  VAEVSAEGLKGLGTMVIDEED
        VAE+   GLKGLGT VIDEE+
Subjt:  VAEVSAEGLKGLGTMVIDEED

Q9MAV7 60S ribosomal protein L312.2e-4779.66Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAE
        +  K RK EVVTREYT+NLHKRLHGCTFKKKAP AIKE+RKFAQ AMGT DVRVDVKLNK IWSRGIRSVP+RVRVRIARKRND+EDAKEE YSLVTVA+
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAE

Query:  VSAEGLKGLGTMVIDEED
        + A  LKGLG  +I+E+D
Subjt:  VSAEGLKGLGTMVIDEED

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein2.3e-4776.27Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAE
        +  K RK EVVTREYT+NLH+RLH CTFKKKAP AIKE+RKFA  AMGT DVRVDVKLNK IWS+GIR  P+R+RVR+ARKRND+EDAKEEF+SLVTVAE
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAE

Query:  VSAEGLKGLGTMVIDEED
        + AEGL GLGT VI+EE+
Subjt:  VSAEGLKGLGTMVIDEED

AT4G26230.1 Ribosomal protein L31e family protein3.5e-4878.26Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA
        K RK EVVTREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+  MGT DVRVDVKLNK IWS+GIR  P+R+RVR+ARKRND+EDAKEEF+SLVTVAE+ A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA

Query:  EGLKGLGTMVIDEED
        EGL GLGT +I+EED
Subjt:  EGLKGLGTMVIDEED

AT5G56710.1 Ribosomal protein L31e family protein1.6e-4879.13Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA
        K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVDVKLNK IWS+GIR  P+R+RVR+ARKRND+EDAKEEF+SLVTVAE+ A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA

Query:  EGLKGLGTMVIDEED
        EGL GLGT VI+EED
Subjt:  EGLKGLGTMVIDEED

AT5G56710.2 Ribosomal protein L31e family protein4.5e-2756.52Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA
        K RK EV+TREYT+NLH+RLH CTFKKKAPKAIKE+RKFA+ AMGT DVRVD                                  EEF+SLVTVAE+ A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSA

Query:  EGLKGLGTMVIDEED
        EGL GLGT VI+EED
Subjt:  EGLKGLGTMVIDEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATAAATCGGCTAAGGCAAGAAAAAGCGAGGTCGTCACCAGGGAGTACACCGTCAATCTCCATAAGCGCCTGCACGGATGCACCTTCAAGAAGAAAGCACCGAA
GGCTATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGGAGTGTGC
CAAAGAGGGTTCGTGTCCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCCAAGGAGGAATTCTATTCCTTAGTAACTGTCGCAGAGGTATCTGCAGAGGGATTGAAG
GGCTTGGGTACCATGGTCATTGATGAAGAGGACTAA
mRNA sequenceShow/hide mRNA sequence
CAGATTTTCTCTTGCCCGTTGGGGTTGCTAGGGTTTTATCTTCAGCGGCGGAGAGTTGGAGTTTGCAGGCCGCGACCAAAAATGGCGGATAAATCGGCTAAGGCAAGAAA
AAGCGAGGTCGTCACCAGGGAGTACACCGTCAATCTCCATAAGCGCCTGCACGGATGCACCTTCAAGAAGAAAGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTC
AGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGGAGTGTGCCAAAGAGGGTTCGTGTCCGCATTGCACGA
AAGCGTAACGACGAGGAAGATGCCAAGGAGGAATTCTATTCCTTAGTAACTGTCGCAGAGGTATCTGCAGAGGGATTGAAGGGCTTGGGTACCATGGTCATTGATGAAGA
GGACTAAATTAGCTTGCCAAAACTAGGTCAGTTTTAGGTATATTATTGTCTCACAGATCCATTTTTGACTTGAGGTTTTTTGCAACTTTAGTGAAGAAATTGTTGTTTTC
AACAATTGATGAGTTTTGTATTAAAGGTTATGTGATTTATGCTTTCAGTCATTTCATGCTTTATAACTTATTATTGATTCTGACCTAGACCAAATTTGATATAGAAAAGT
GATAACTGATGATGAATTATGATCATCTTACATCAAAATTTTAGGTGCACTTCCATTGATTGGTGGTCTTATAAATTGTCACCTTTATAAATT
Protein sequenceShow/hide protein sequence
MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPKRVRVRIARKRNDEEDAKEEFYSLVTVAEVSAEGLK
GLGTMVIDEED