; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001409 (gene) of Snake gourd v1 genome

Gene IDTan0001409
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationLG06:73370221..73371817
RNA-Seq ExpressionTan0001409
SyntenyTan0001409
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025876.1 uncharacterized protein E6C27_scaffold34G001550 [Cucumis melo var. makuwa]2.6e-6440Show/hide
Query:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------
        TLY    + S +IRI D KDV W++  +     N++ +V+D +  ++   +T  +S+    T  S      +D N  E  +                   
Subjt:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------

Query:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT
                          +  +FD+  K  S    +   +  RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP T
Subjt:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT

Query:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH
        YT +E D++GRF+++FM L+ASI AW +C P+ISVDGA++KN + GTL+S  T+DGNSQI+PL FA+VDS+ND SW+WFF NLKAV GE  ++++VSD +
Subjt:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH

Query:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL
         SI  G + +Y+ AEHGLC+F++L+NLKKN  SL     F+   + +TLL
Subjt:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]1.5e-6440Show/hide
Query:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------
        TLY    + S +IRI D KDV W++  +     N++ +V+D +  ++   +T  +S+    T  S      +D N  E  +                   
Subjt:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------

Query:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT
                          +  +FD+  K  S    +   +  RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP T
Subjt:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT

Query:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH
        YT +E D++GRF+++FM L+ASI AW +C P+ISVDGA++KN + GTL+S  T+DGNSQI+PL FA+VDS+ND SW+WFF NLKAV GE  ++++VSD +
Subjt:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH

Query:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL
         SI  G + +Y+ AEHGLC+F++L+NLKKN  SL     F+   + +TLL
Subjt:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.2e-6555.61Show/hide
Query:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD
        ND    RP D+I YM+   GVNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP TYT +E D++GRF+++FM L+ASI AW +C P+ISVD
Subjt:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD

Query:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ
        GA++KN + GTL+SA T+DGNSQI+PLAFA+VDS+ND SW+WFF NLKAV GE  ++++VSD H SI  G + +Y+ AEHGLC+F++L+NLKKN  SL  
Subjt:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ

Query:  LTMFSTIVQEHTLL
           F+   + +T L
Subjt:  LTMFSTIVQEHTLL

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]1.7e-6354.21Show/hide
Query:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD
        ND +  RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP TYT +E D++GRF+++FM L+ASI AW +C P+ISVD
Subjt:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD

Query:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ
        GA++KN + GTL+S  T+DGNSQI+PL FA+VDS+ND SW+WFF NLKAV GE  ++++VSD + SI  G + +Y+ AEHGLC+F++L+NLKKN  SL  
Subjt:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ

Query:  LTMFSTIVQEHTLL
           F+   + +TLL
Subjt:  LTMFSTIVQEHTLL

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]9.8e-6457.44Show/hide
Query:  VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISV
        +ND    RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP TYT +E D++GRF+++FM L+ASI AW +C P+ISV
Subjt:  VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISV

Query:  DGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN
        DGA++KN + GTL+SA T+DGNSQI+PLAFA+VDS+ND SW+WFF NLKAV  E  ++++VSD H SI  G + +Y+ AEHGLC+F++L+NLKKN
Subjt:  DGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958998.1e-6454.21Show/hide
Query:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD
        ND +  RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP TYT +E D++GRF+++FM L+ASI AW +C P+ISVD
Subjt:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD

Query:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ
        GA++KN + GTL+S  T+DGNSQI+PL FA+VDS+ND SW+WFF NLKAV GE  ++++VSD + SI  G + +Y+ AEHGLC+F++L+NLKKN  SL  
Subjt:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ

Query:  LTMFSTIVQEHTLL
           F+   + +TLL
Subjt:  LTMFSTIVQEHTLL

A0A1S4E392 uncharacterized protein LOC1079918244.7e-6457.44Show/hide
Query:  VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISV
        +ND    RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP TYT +E D++GRF+++FM L+ASI AW +C P+ISV
Subjt:  VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISV

Query:  DGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN
        DGA++KN + GTL+SA T+DGNSQI+PLAFA+VDS+ND SW+WFF NLKAV  E  ++++VSD H SI  G + +Y+ AEHGLC+F++L+NLKKN
Subjt:  DGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN

A0A5A7SJA0 Uncharacterized protein1.2e-6440Show/hide
Query:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------
        TLY    + S +IRI D KDV W++  +     N++ +V+D +  ++   +T  +S+    T  S      +D N  E  +                   
Subjt:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------

Query:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT
                          +  +FD+  K  S    +   +  RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP T
Subjt:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT

Query:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH
        YT +E D++GRF+++FM L+ASI AW +C P+ISVDGA++KN + GTL+S  T+DGNSQI+PL FA+VDS+ND SW+WFF NLKAV GE  ++++VSD +
Subjt:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH

Query:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL
         SI  G + +Y+ AEHGLC+F++L+NLKKN  SL     F+   + +TLL
Subjt:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL

A0A5D3DFW1 Uncharacterized protein7.3e-6540Show/hide
Query:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------
        TLY    + S +IRI D KDV W++  +     N++ +V+D +  ++   +T  +S+    T  S      +D N  E  +                   
Subjt:  TLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTNMSHINKKDVDFNFIEFTDI------------------

Query:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT
                          +  +FD+  K  S    +   +  RP D+I YM+    VNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP T
Subjt:  ------------------DPFTFDLSLKKNS----VNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCT

Query:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH
        YT +E D++GRF+++FM L+ASI AW +C P+ISVDGA++KN + GTL+S  T+DGNSQI+PL FA+VDS+ND SW+WFF NLKAV GE  ++++VSD +
Subjt:  YTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQH

Query:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL
         SI  G + +Y+ AEHGLC+F++L+NLKKN  SL     F+   + +TLL
Subjt:  NSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQLTMFSTIVQEHTLL

A0A5D3E198 MuDRA-like transposase2.5e-6555.61Show/hide
Query:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD
        ND    RP D+I YM+   GVNISY KAW GRE+AL+ I G+P   Y ++ AF  ALI  NP TYT +E D++GRF+++FM L+ASI AW +C P+ISVD
Subjt:  NDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFRYFFMCLSASIHAWKHCFPIISVD

Query:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ
        GA++KN + GTL+SA T+DGNSQI+PLAFA+VDS+ND SW+WFF NLKAV GE  ++++VSD H SI  G + +Y+ AEHGLC+F++L+NLKKN  SL  
Subjt:  GASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNILRNLKKN-TSLDQ

Query:  LTMFSTIVQEHTLL
           F+   + +T L
Subjt:  LTMFSTIVQEHTLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTGATATCTCTAAGTGTATTGCATGATGGAATTTGGGATGAATCCAACCGATACAATAATTTTAAAGTGTCGTCTTTTTCCGATTCTATTCGTAGCAAACTGCA
CTTTTCGAATAATCAAATTATTACTCGGTCGACTTTGTACAGGGATTATTTTGATAAATCTAGTGTAATTAGAATTACTGATTATAAGGATGTTATGTGGGTACTCTCTA
CTATAGTTGATGGTGTATCTAATAATGTCCATCTTGTTGTTGATTATTCAAAAGTGTCTGAATTTGATTGTTCCACTACTATTATATCTAATTACAGTGGAGGTACAAAT
ATGAGTCATATCAACAAGAAGGATGTTGATTTTAATTTTATCGAATTTACTGACATTGATCCTTTTACGTTTGATTTGTCTCTCAAGAAAAATTCTGTTAATGACGGTAT
TCATATTCGTCCTCGAGACATTATTAAATATATGAGGAGGAAACTTGGTGTGAACATTAGTTATGGTAAGGCATGGATGGGTCGTGAACTTGCACTGGATTGTATTCATG
GTTCTCCTACATCCCCATACTTGCTTATTCCTGCCTTTTTCGTTGCCCTTATTGATAAAAATCCATGTACATACACGACTCAAGAGGTTGACGAGGATGGTAGGTTTAGG
TATTTCTTTATGTGTCTATCAGCTTCTATTCATGCATGGAAACATTGTTTTCCTATTATATCAGTTGATGGCGCTTCTTTGAAGAACAATTTTTTTGGCACATTATTATC
TGCTATCACTCTTGATGGGAATTCTCAAATTATTCCATTGGCGTTTGCAATAGTAGATTCGAAAAATGATCGATCATGGACTTGGTTTTTTCATAATTTGAAAGCTGTTT
TAGGGGAGCCGAAGGACTTAATTGTTGTTTCTGATCAGCATAATAGCATCACGAAAGGTATTAGCATAATTTATGATACTGCAGAACATGGATTATGTTCATTTAATATT
TTGAGAAATCTAAAAAAGAACACAAGTCTAGACCAATTGACAATGTTTTCCACAATTGTGCAAGAGCATACACTGTTGTTGATTTTGAATATTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTGATATCTCTAAGTGTATTGCATGATGGAATTTGGGATGAATCCAACCGATACAATAATTTTAAAGTGTCGTCTTTTTCCGATTCTATTCGTAGCAAACTGCA
CTTTTCGAATAATCAAATTATTACTCGGTCGACTTTGTACAGGGATTATTTTGATAAATCTAGTGTAATTAGAATTACTGATTATAAGGATGTTATGTGGGTACTCTCTA
CTATAGTTGATGGTGTATCTAATAATGTCCATCTTGTTGTTGATTATTCAAAAGTGTCTGAATTTGATTGTTCCACTACTATTATATCTAATTACAGTGGAGGTACAAAT
ATGAGTCATATCAACAAGAAGGATGTTGATTTTAATTTTATCGAATTTACTGACATTGATCCTTTTACGTTTGATTTGTCTCTCAAGAAAAATTCTGTTAATGACGGTAT
TCATATTCGTCCTCGAGACATTATTAAATATATGAGGAGGAAACTTGGTGTGAACATTAGTTATGGTAAGGCATGGATGGGTCGTGAACTTGCACTGGATTGTATTCATG
GTTCTCCTACATCCCCATACTTGCTTATTCCTGCCTTTTTCGTTGCCCTTATTGATAAAAATCCATGTACATACACGACTCAAGAGGTTGACGAGGATGGTAGGTTTAGG
TATTTCTTTATGTGTCTATCAGCTTCTATTCATGCATGGAAACATTGTTTTCCTATTATATCAGTTGATGGCGCTTCTTTGAAGAACAATTTTTTTGGCACATTATTATC
TGCTATCACTCTTGATGGGAATTCTCAAATTATTCCATTGGCGTTTGCAATAGTAGATTCGAAAAATGATCGATCATGGACTTGGTTTTTTCATAATTTGAAAGCTGTTT
TAGGGGAGCCGAAGGACTTAATTGTTGTTTCTGATCAGCATAATAGCATCACGAAAGGTATTAGCATAATTTATGATACTGCAGAACATGGATTATGTTCATTTAATATT
TTGAGAAATCTAAAAAAGAACACAAGTCTAGACCAATTGACAATGTTTTCCACAATTGTGCAAGAGCATACACTGTTGTTGATTTTGAATATTATATGA
Protein sequenceShow/hide protein sequence
MSLISLSVLHDGIWDESNRYNNFKVSSFSDSIRSKLHFSNNQIITRSTLYRDYFDKSSVIRITDYKDVMWVLSTIVDGVSNNVHLVVDYSKVSEFDCSTTIISNYSGGTN
MSHINKKDVDFNFIEFTDIDPFTFDLSLKKNSVNDGIHIRPRDIIKYMRRKLGVNISYGKAWMGRELALDCIHGSPTSPYLLIPAFFVALIDKNPCTYTTQEVDEDGRFR
YFFMCLSASIHAWKHCFPIISVDGASLKNNFFGTLLSAITLDGNSQIIPLAFAIVDSKNDRSWTWFFHNLKAVLGEPKDLIVVSDQHNSITKGISIIYDTAEHGLCSFNI
LRNLKKNTSLDQLTMFSTIVQEHTLLLILNII