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Tan0001418 (gene) of Snake gourd v1 genome

Gene IDTan0001418
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFormin-like protein 4 isoform X2
Genome locationLG06:6305104..6308745
RNA-Seq ExpressionTan0001418
SyntenyTan0001418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVX04821.1 hypothetical protein CK203_024979 [Vitis vinifera]4.7e-1242.22Show/hide
Query:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE
        + G  +GQ++LF   H+  +D W+N  A+D Y KM +L    + EG+  ++++E+C+  LG +SG++KGLG+ PKP S S S  SSS+HE
Subjt:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]2.8e-0459.32Show/hide
Query:  LNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQK
        +  ST    T  SGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V K
Subjt:  LNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQK

XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]1.0e-2257.58Show/hide
Query:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK
        + ++ + K+++G  + QVDLF +SHF  KD WVN++AKDAYL+MQ+L+EAS QE   P+S  EVCK  LG RSG+IKGLG +PKP SSSSVTS  Q +K
Subjt:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]2.8e-0459.32Show/hide
Query:  LNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQK
        +  ST    T  SGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V K
Subjt:  LNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQK

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]7.6e-1849.04Show/hide
Query:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPC-----SSSSVTSSS
        + ++ + K+++G  IG VDLF ESH++ KD  VND+A+DAY  MQ L++A  QEG EP++Q E C+  LG R  H+KGLG+ P+P      SSS+VTSS+
Subjt:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPC-----SSSSVTSSS

Query:  QHEK
         +EK
Subjt:  QHEK

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]1.0e-2257.58Show/hide
Query:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK
        + ++ + K+++G  + QVDLF +SHF  KD WVN++AKDAYL+MQ+L+EAS QE   P+S  EVCK  LG RSG+IKGLG +PKP SSSSVTS  Q +K
Subjt:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]2.8e-0459.32Show/hide
Query:  LNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQK
        +  ST    T  SGSRS SR  SR   RR RGHSR +EL+R+VN HGRI IEIDE+V K
Subjt:  LNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQK

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]1.0e-2257.58Show/hide
Query:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK
        + ++ + K+++G  + QVDLF +SHF  KD WVN++AKDAYL+MQ+L+EAS QE   P+S  EVCK  LG RSG+IKGLG +PKP SSSSVTS  Q +K
Subjt:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK

TrEMBL top hitse value%identityAlignment
A0A438CMH8 Uncharacterized protein2.3e-1242.22Show/hide
Query:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE
        + G  +GQ++LF   H+  +D W+N  A+D Y KM +L    + EG+  ++++E+C+  LG +SG++KGLG+ PKP S S S  SSS+HE
Subjt:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE

A0A438GRP1 Uncharacterized protein8.7e-1242.22Show/hide
Query:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE
        + G  IGQ++LF   H+  +D W+N  A+D Y KM +L    + EG+  ++++E+C+  LG + G++KGLG+ PKP S S S  SSS+HE
Subjt:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE

A0A438J796 Uncharacterized protein2.3e-1242.22Show/hide
Query:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE
        + G  +GQ++LF   H+  +D W+N  A+D Y KM +L    + EG+  ++++E+C+  LG +SG++KGLG+ PKP S S S  SSS+HE
Subjt:  QKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCS-SSSVTSSSQHE

A0A5D3DBZ5 Formin-like protein 4 isoform X21.9e-1141.18Show/hide
Query:  LERYVNAHGRIPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSS
        L   +N H   PIE +E    G  + +++LF  +H + K+ WVN+ AK+ Y +M +L   S QEGSEP+ + E+C   LG RSGH+KG GW P+P ++ +
Subjt:  LERYVNAHGRIPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPCSSSS

Query:  VT
         T
Subjt:  VT

A0A6J1DUH3 uncharacterized protein LOC1110232123.7e-1849.04Show/hide
Query:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPC-----SSSSVTSSS
        + ++ + K+++G  IG VDLF ESH++ KD  VND+A+DAY  MQ L++A  QEG EP++Q E C+  LG R  H+KGLG+ P+P      SSS+VTSS+
Subjt:  IPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEPISQSEVCKMALGTRSGHIKGLGWDPKPC-----SSSSVTSSS

Query:  QHEK
         +EK
Subjt:  QHEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGGAGGTTAAATCGTTCGACAGCGGAACGTCGTACACGACCTTCAGGATCTAGATCACGTTCTAGAGTAGCCTCTAGATCGCGAGGCAGAAGGGCAAGAGGGCA
TAGCCGGAGGATTGAGTTAGAGCGTTATGTAAATGCACATGGTAGAATACCCATCGAGATCGATGAGAAGGTACAAAAGGGTCATGCCATAGGCCAAGTTGATTTGTTCC
ATGAAAGTCACTTCAGCATAAAGGACGAATGGGTGAACGACCATGCGAAGGATGCATATTTGAAAATGCAACAACTTCTTGAAGCATCATTGCAGGAAGGATCTGAGCCA
ATCTCACAGTCAGAAGTTTGTAAAATGGCTTTGGGTACTCGATCAGGCCACATAAAAGGTCTTGGTTGGGACCCAAAACCTTGTTCGTCGTCTAGCGTCACATCTTCTTC
CCAACATGAAAAATAG
mRNA sequenceShow/hide mRNA sequence
TGTCGGAGGGTTTTCTTTTTCGCTTCATCAGTCGAGAGTTTTCTTCATCAGGCGTTTTCTCCGTTGGAAGACTGGAAACGAAGTCATTCTCTTCTCCTTCCCATAGCGGC
AACACGATTTTTCTCCTTTCGGTCGCAACCTTGTACCTTTATTTTCCTCTATCTTTCCAACTTCCTCTCTCCTTCCAAGCAGTAGTGGAAAGTTCATCCATTTTTCAACT
CAAAGGTCCGTGTATATCACTCTCTCATCTCGATTTTTATAAGGTTTGTATACAATTTTTTGTCTATTAATTCTTAGTTCCAAATGTGTTATATATTGAACACATTCTAT
TTATTTATTCATACATTTTTCTGTCTATTAATTTTCTAACAATTTAACTATTATACTTATATGGTGCTTCTAAAAATTACTTGGTTTGGTCTTTGTCCGTTGAACAAAAT
TTTGATTTAGCAAGAAGAAGAAGGAAAAACTGAACAAAACATCAAGTCTATTAGATGATGAACATTATAAAGATGCTTATGGATTTAGGCTCCTTTATTTACCTAGAAGA
CTTTAAAATACATATATTTTCTTGATGTTTCAGCAATTTGTTAGGAGTAGTGGAAACATAATTGATTAGATATTTCTAGGTCAATTAGGTAAAATTCTTTTCCATATATA
TTCCCATTTCATTGATTTTTTCATGACAAGTTGCGAAATACATGTCAATCTTGATTGATGAATTTCTAATATAGTTAATTTTTGTTTTGAATTTAGTATTTGGAAATGGT
TTTTAAGAGTATTTTCCATTATTGTTAAGTCTAGAGTTCTACTTTCGGATTGATTGAAGTTATGGCACTAGGATTGTTAAGTGAGTGTTGCTGGTGGAAGATCATTTCAA
AACTATAGATGATTATTTGATCAATTGAAGGCTCATTGACAAAATTGCAGGTTATTGATGGGGTATTAGATGAGATGTTTGTGAGTTTCCAATTTCAAGATAGGAATAAG
AAATTAATGTAAAAAAATGGCAGTTTTTGTATTTGGACAGGAAGCATAAAGGTTATATAATGAACAGGTTTTAACATCTAGTGTTTCTTGTTGGTCCATAATATCTTTAA
AATATAGTAGTTAGATCCAAATATTTTCCCCATTTTAGTGTTGTGTTCTTTCTTAGCTTTCTTCTCTATTCATTAAAGCAATTTATGTGTTGTTGTTCAAAATTGAAACT
CATTTCGTTAACAAAGAAGAGTTGCAGAGGTTAGAGTTAAATAAGATTGTATCATCCTCTAATGACACCGATTTTATAAATGATGAATCCGAAGACGATGAAGTAGCTAC
TGAAGATAGTTCTGGCTCATTTCAATATTTAGATTCGGATCACTAGGAAAAGTGATGGTGCATCCAAGTCAAGATCATGATGTAGTTGTTGTGTTAGAAGAGGAGAATGC
TCCGGAGGTTAAATCGTTCGACAGCGGAACGTCGTACACGACCTTCAGGATCTAGATCACGTTCTAGAGTAGCCTCTAGATCGCGAGGCAGAAGGGCAAGAGGGCATAGC
CGGAGGATTGAGTTAGAGCGTTATGTAAATGCACATGGTAGAATACCCATCGAGATCGATGAGAAGGTACAAAAGGGTCATGCCATAGGCCAAGTTGATTTGTTCCATGA
AAGTCACTTCAGCATAAAGGACGAATGGGTGAACGACCATGCGAAGGATGCATATTTGAAAATGCAACAACTTCTTGAAGCATCATTGCAGGAAGGATCTGAGCCAATCT
CACAGTCAGAAGTTTGTAAAATGGCTTTGGGTACTCGATCAGGCCACATAAAAGGTCTTGGTTGGGACCCAAAACCTTGTTCGTCGTCTAGCGTCACATCTTCTTCCCAA
CATGAAAAATAGCTTGAAAAGAAGGTGGAGTAGATGCAAGCTGAGATTGGTACCTTAACGACGAAGTTGCCCTCATGGGAAGAAAGATGGGCTGAATTCACCAAGTACAT
GGAAGAAAGGCAGGGTGAAGGTTCTTCAAACCCCTAGGTTTATAGTTGCAACGCATAATCTTCAAGCAATGACTTTTGAAGCATAGAAGAGTTGGTGTCATTTATTTTTG
AAATGTCTATGTAATGAATTTAGTTTCTTTTGGACAACTTAGTACTATATCTGGATTAATGTACTAAATTATTTTGGATACGTTGGAGTTTTTTTTTTCTGAAAAACTAT
TGCAC
Protein sequenceShow/hide protein sequence
MLRRLNRSTAERRTRPSGSRSRSRVASRSRGRRARGHSRRIELERYVNAHGRIPIEIDEKVQKGHAIGQVDLFHESHFSIKDEWVNDHAKDAYLKMQQLLEASLQEGSEP
ISQSEVCKMALGTRSGHIKGLGWDPKPCSSSSVTSSSQHEK