; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001430 (gene) of Snake gourd v1 genome

Gene IDTan0001430
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLYR motif-containing protein 4
Genome locationLG05:75183142..75183986
RNA-Seq ExpressionTan0001430
SyntenyTan0001430
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9626534.1 hypothetical protein IFM89_034468 [Coptis chinensis]2.1e-2474.7Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        M+TPSR EIL+L R+LLRT+++FSDYNIREY KRRTID F EN+ LSDPSL+SSA+   K+QLEVAKRQA+VYSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2886.75Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MA PSR EIL+L RSLLRT+RQF DYNIREYTKRRTIDAF+ENQ LSDPS ISS YAGGKAQLEVAKRQALVYSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]3.0e-2681.93Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MATPS  EILSL RSLLRT+RQF DYNIREY KRRTID+F+ENQ LSD S ISS YAGG+AQLEVAKRQA+VYSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]2.9e-2986.21Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFK
        MATPSR EILSL RSLLRT+RQFSDYNIREYTKRR IDAF+EN+ LSDPS ISSAYAGGKAQLEVAKRQALVYSLYAPKVK I   K
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFK

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]8.4e-2987.95Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MATPSR E+LSL RSLLRT+RQF DYNIREYTKRRTIDAF+ENQ LSD S ISSAYAGGKAQLEVAKRQALVYSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.4e-2681.93Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MATPS  EILSL RSLLRT+RQF DYNIREY KRRTID+F+ENQ LSD S ISS YAGG+AQLEVAKRQA+VYSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

A0A1J6JR59 Uncharacterized protein1.0e-2472.29Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MA+PSR E+L+L RSLL+T+RQF DYNIREYTKRRTIDAFQ+N+ LSDPS +++A++ G++QLEVAKRQA+VYSLYAPKVK +
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

A0A1S3BV74 LYR motif-containing protein 41.8e-2475.9Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MA P+R E LSLLRSL+RTSRQF DYNIREY KRR +D F+ N+ LSDPS ISSAYA GKAQLEVAKRQ+ +YSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

A0A5A7UTC8 LYR motif-containing protein 41.8e-2475.9Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI
        MA P+R E LSLLRSL+RTSRQF DYNIREY KRR +D F+ N+ LSDPS ISSAYA GKAQLEVAKRQ+ +YSLYAPKVK I
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRI

A0A6J1C8A4 LYR motif-containing protein 41.4e-2986.21Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFK
        MATPSR EILSL RSLLRT+RQFSDYNIREYTKRR IDAF+EN+ LSDPS ISSAYAGGKAQLEVAKRQALVYSLYAPKVK I   K
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFK

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 43.4e-0945.45Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR ++L L R+LLR S++FS YN R Y  RR  DAF+EN+ ++D   I       KA LEV +RQ  +  +YA
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA

Q0VCG0 LYR motif-containing protein 44.2e-0738.96Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR ++L L R++LR S++F  YN R Y  RR  DAF+EN+ + DP  I +     K  L + +RQ  +  +Y+
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA

Q6Q560 Protein ISD112.7e-0632.88Show/hide
Query:  PSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLY
        P+R ++LSL +  ++ + QF++YN REY   +T   F++N    DP ++ + +   K  L V KRQ+++  +Y
Subjt:  PSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLY

Q8K215 LYR motif-containing protein 42.9e-0841.56Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR ++L L R+++R S+ FS YN R Y  RR  DAF+EN+ + DP  I +     K  LE+ +RQ  +  LY+
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA

Q9HD34 LYR motif-containing protein 41.7e-0844.16Show/hide
Query:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA
        MA  SR ++LSL R++LR S++FS YN R Y  RR  DAF+EN+ + DP  I +     K  L V +RQ  +  LY+
Subjt:  MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein9.3e-1856.63Show/hide
Query:  SRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFK
        S  E+LSL R+LLR  RQF DYNIREY+KRRT+D F+ N+ L+DPS ++ AYA  K QL VA+R   VY  Y PK K I   K
Subjt:  SRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCATCGAGGTTTGAAATTCTCTCGCTCCTTCGTTCTCTTCTTCGCACGTCGCGTCAATTCTCCGATTACAATATCAGAGAATACACCAAACGCCGCACCAT
TGATGCCTTCCAAGAAAATCAGATCCTCTCCGACCCTTCATTGATCTCCTCAGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGGATTTTCGTTTTCAAATTTATCAAGCCTGAATCATATTGTGATGGATTTATGAATTTTCTGGCTCATATCAGCTTGAAATTGAGT
ATGGAAAAAACACTTATTTGCTTAGATTATATTAGGAAAAGCTTTACATTTCAGTTTGACAGGAGCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCCATCGAGGTTTGAAATTCTCTCGCTCCTTCGTTCTCTTCTTCGCACGTCGCGTCAATTCTCCGATTACAATATCAGAGAATACACCAAACGCCGCACCAT
TGATGCCTTCCAAGAAAATCAGATCCTCTCCGACCCTTCATTGATCTCCTCAGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGGATTTTCGTTTTCAAATTTATCAAGCCTGAATCATATTGTGATGGATTTATGAATTTTCTGGCTCATATCAGCTTGAAATTGAGT
ATGGAAAAAACACTTATTTGCTTAGATTATATTAGGAAAAGCTTTACATTTCAGTTTGACAGGAGCATGTAG
Protein sequenceShow/hide protein sequence
MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFKFIKPESYCDGFMNFLAHISLKLS
MEKTLICLDYIRKSFTFQFDRSM