; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001436 (gene) of Snake gourd v1 genome

Gene IDTan0001436
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationLG05:7676354..7682738
RNA-Seq ExpressionTan0001436
SyntenyTan0001436
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-13295.62Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRF G+QDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMP V+PQYGKHGGSHG+G RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]1.6e-13496.41Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS+YRDRRFHGSQDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]1.6e-13496.81Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRFHGSQDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]2.4e-13395.62Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRF G+QDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMP V+PQYGKHGGSHG+GHRHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]1.8e-13396.8Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRFHG+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DDRHAHESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 21.8e-13193.39Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS+YRDRRFHGSQDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHH
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG+RHGRDYHH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 27.9e-13596.81Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRFHGSQDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1FX36 Nuclear cap-binding protein subunit 21.7e-13295.22Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRF G+QDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+P V+PQYGKHGGSHG+G RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 21.1e-13395.62Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRF G+QDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMP V+PQYGKHGGSHG+GHRHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1JFW0 Nuclear cap-binding protein subunit 23.7e-13295.62Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRF G+QDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMP V+PQYGKHGGSHG+GHRHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 24.3e-5369.5Show/hide
Query:  KLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 21.9e-5368.09Show/hide
Query:  LSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD
        LS YRD+ F GS+ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD GRGGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL

Q84L14 Nuclear cap-binding protein subunit 29.5e-9373.02Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS YRDRRF G+Q+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVK+ISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHG--HRHGRDYHHRKRY
        DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG       P   PQY +     G+G  +R+ RDY  RKRY
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHG--HRHGRDYHHRKRY

Query:  RDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        R+D+R    SS+R  D E +R+       EKNPRFRE GDSDEEDDD  K+R
Subjt:  RDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Q9CQ49 Nuclear cap-binding protein subunit 24.3e-5369.5Show/hide
Query:  KLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 22.2e-10576.56Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMP-QYG---KHGGSHGHG--HRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG++G G  +RHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMP-QYG---KHGGSHGHG--HRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-0934.57Show/hide
Query:  LALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I V+
Subjt:  LALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 201.5e-10676.56Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMP-QYG---KHGGSHGHG--HRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG++G G  +RHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMP-QYG---KHGGSHGHG--HRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 201.5e-10676.56Show/hide
Query:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMP-QYG---KHGGSHGHG--HRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG++G G  +RHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMP-QYG---KHGGSHGHG--HRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCATTATTCAAGGACCCGTCAAAGTTATCTGTATATCGGGATAGAAGATTTCACGGATCACAAGATGAATTTGAACTGGCACTTCAGACTTCAACCACCGTTTA
TGTGGGAAATATGTCCTTTTATACGACAGAAGAACAAGTTTATGAGCTCTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAGACAC
CTTGTGGCTTTTGTTTTGTCCTATATTATTCTCGGGAGGATACCGAGGATGCTGTAAAATTTATAAGTGGAACAATTCTCGATGATCGTCCTATTCGTGTGGATTTTGAT
TGGGGATTTCAAGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTAGT
ACAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCCGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGAC
ATGGGCATCGTCATGGTAGAGACTACCACCATCGTAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTATGAGTCTAGAAGAAAC
CCCGATCATGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGACGACGATGACCGAAAGCAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
GTCGAAGAGGTATAGATTATGTTATGTGCATTAATACGCAGCGCTGCGGAAGAACTAAGAAGCGCACGAGCAGAATTGGGCAACTGAGCTCAACCAACCAGTTCTTCAGG
TCTGAGGCAAAATCCAATCCGGAATTTACCTGCTGCTGCTGCTAGTTTGATTTCAATTTGAAGCGCCTCTAACCTCTGTTCCTCGATTTCTTACTTTTTCCATTTCGTTT
CTCAACCTGGGTGATTATATTATTGCCCAAATTCCCAACACGGATTTCATTTTGATACTTGGTTTTGTTAAGCGTCTGCTATAGTTACTTCGGCTGAAGTGGGGTTTCGA
GTTGTAGTGCAGATTTTGTTATTCTAGGGTTCATGGCTTCATTATTCAAGGACCCGTCAAAGTTATCTGTATATCGGGATAGAAGATTTCACGGATCACAAGATGAATTT
GAACTGGCACTTCAGACTTCAACCACCGTTTATGTGGGAAATATGTCCTTTTATACGACAGAAGAACAAGTTTATGAGCTCTTTTCTCGAGCTGGAGAAATTAAGAAGAT
AATCATGGGTTTGGATAAGAATTCAAAGACACCTTGTGGCTTTTGTTTTGTCCTATATTATTCTCGGGAGGATACCGAGGATGCTGTAAAATTTATAAGTGGAACAATTC
TCGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAAGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTAT
GATCCTGGTAGAGGTGGCTATGGAAAGTTAGTACAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCCGCCAGTCATGCC
TCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGTAGAGACTACCACCATCGTAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTA
AGAGAACTTCAGATTATGAGTCTAGAAGAAACCCCGATCATGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGACGACGATGAC
CGAAAGCAGCGACACTAACCAGAGTGCCATTGCCATATTATGATGTGAGGAACCATTAAAATTGGCATTCAGCACAAGTGATAAGGGTCAAAGTTCATTACTTCTGCATG
TTAAAACTAGCGAGTTATTCTTTTTCCATGTCACGAGGTACTTTTGCTTTGTTTAATGAAGGAATGACTTTAATTGCTGTCTGTACCGTTTCTTATAAGAATCAAGTGGG
GATCTTGTCGAACTATCTTCAAAAAGATAAATTATACAATTCTCAATAGAAAGTTGCTATCA
Protein sequenceShow/hide protein sequence
MASLFKDPSKLSVYRDRRFHGSQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN
PDHESRPEKNPRFRESGDSDEEDDDDRKQRH