CuGenDBv2

Gene ID	Tan0001459
Organism	Trichosanthes anguina (Snake gourd v1)
Description	FAM192A_Fyv6_N domain-containing protein
Genome location	LG11:16018093..16023050
RNA-Seq Expression	Tan0001459
Synteny	Tan0001459
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR019331 - FAM192A/Fyv6, N-terminal IPR039845 - PSME3-interacting protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579151.1 hypothetical protein SDJN03_23599, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-85

85.92

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Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARI+PRSPEKAGS+A           ES +THDT SDR LEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESED+D
Subjt:  GLVSYSDESEDED

KAG7016669.1 hypothetical protein SDJN02_21779 [Cucurbita argyrosperma subsp. argyrosperma]

8.6e-86

86.38

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Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +THDT SDR LEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESED+D
Subjt:  GLVSYSDESEDED

XP_022938625.1 uncharacterized protein LOC111444804 [Cucurbita moschata]

4.6e-87

87.32

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Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +THDT SDRPLEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_022993730.1 protein FAM192A [Cucurbita maxima]

1.1e-85

86.38

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Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+LNE++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARIEPRSPEKA  +A           ES +THDT +DRPLEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_023549588.1 protein FAM192A [Cucurbita pepo subsp. pepo]

4.6e-87

87.32

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +THDT SDRPLEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U2Y6 Protein FAM192A

1.1e-83

86.85

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTHDTISDRPLEAAT-T
        SFQAAVAAQSI+LNE++EITPPAPAAQEKA VRRETP +RPPSMII+VKPQAKKARIEPRSP+ AGS       KAE    S KT DT SDRPLEAA  T
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTHDTISDRPLEAAT-T

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5D3BGC9 Protein FAM192A

1.1e-83

86.85

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTHDTISDRPLEAAT-T
        SFQAAVAAQSI+LNE++EITPPAPAAQEKA VRRETP +RPPSMII+VKPQAKKARIEPRSP+ AGS       KAE    S KT DT SDRPLEAA  T
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE----SAKTHDTISDRPLEAAT-T

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1CXV7 protein FAM192A

1.8e-84

89.11

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Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEE+ELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSK-AESAKTHDTISDRPLEAATTGLVSYSDESED
        SFQAAVAAQS ML+ELKE+TPPAP AQEK  VRRETPATR PSMIIKVKPQAKKARIEPRSPEKA ++ +ES KT ++I DRP EAAT GLVSYS ESED
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSK-AESAKTHDTISDRPLEAATTGLVSYSDESED

Query:  ED
        ED
Subjt:  ED

A0A6J1FKA5 uncharacterized protein LOC111444804

2.2e-87

87.32

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+L+E++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARIEPRSPEKAGS+A           ES +THDT SDRPLEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1JZC4 protein FAM192A

5.5e-86

86.38

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-
        SFQAAVAAQSI+LNE++EITPPAPAAQEKAPVR+ETP TRPPSMII+VKPQAKKARIEPRSPEKA  +A           ES +THDT +DRPLEAATT 
Subjt:  SFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKA-----------ESAKTHDTISDRPLEAATT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

SwissProt top hits

e value

%identity

Alignment

Q91WE2 PSME3-interacting protein

8.3e-07

36.52

Show/hide

Query:  EDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLYEILKENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYER
        ED+S   I+   FVSE +LDE +K R E  E      D           R LYE L+E KD++  E+ E+FK +   + LDEDET FLD++   +   E+
Subjt:  EDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLYEILKENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYER

Query:  QMADAEEQELRSFQA
        Q  + E +EL+ +++
Subjt:  QMADAEEQELRSFQA

Arabidopsis top hits

e value

%identity

Alignment

AT3G62140.1 CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

4.0e-57

61.21

Show/hide

Query:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        M DE+ + IRL+NFVSEEQLDE+KK RGERVEDGT QRDR LYEILKENKDK+DAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQ+A+ E+++LR
Subjt:  MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSIMLNELKE--ITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTHD---------TISDRPLEAATTG
        +FQAAVAA+S +L+E KE  + PPAP  +E+ P+ +  PATRP   IIKVKPQ KKA+   +  ++     + A   D          ++ +  E   TG
Subjt:  SFQAAVAAQSIMLNELKE--ITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTHD---------TISDRPLEAATTG

Query:  --LVSYSDESEDED
          LVSYSDESED+D
Subjt:  --LVSYSDESEDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGACGAATCTGGGCGAGCAATTAGGCTAATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCA
AAGGGACAGACCCCTCTACGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGACGAGA
CAGAATTTCTGGACAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGCAGCGGTAGCAGCACAATCT
ATTATGTTGAATGAACTGAAAGAAATAACCCCTCCTGCACCAGCAGCTCAGGAAAAGGCACCAGTTAGGAGAGAAACTCCAGCAACTCGACCCCCGAGTATGATTATTAA
AGTAAAGCCACAGGCAAAGAAAGCGAGGATCGAACCCAGAAGCCCAGAAAAAGCTGGTAGTAAGGCTGAATCAGCAAAAACACATGATACCATTAGTGATAGGCCTCTTG
AAGCTGCTACAACAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG

mRNA sequence

Show/hide mRNA sequence

GGGCTAACTTGTAATTAACCTTTTATCTGAAAATTTTCGGCTTTTACAGGCATTGAAGGGGGACGAAGGAGGAAGAAAGTCGAGAATGGCAAGAACGTTGTAGTTGTAGG
GAAGTGACTTTGTAAATTTGTAATACCTTTTCTTTTTCGGTGAAATTTTGAAGTGTTTGAAGAATTTGAAGTGGAGGGCGAGCGAGAATGGAGGACGAATCTGGGCGAGC
AATTAGGCTAATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGGGACAGACCCCTCTACGAGA
TTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGACGAGACAGAATTTCTGGACAAATTGGAA
ACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGCAGCGGTAGCAGCACAATCTATTATGTTGAATGAACTGAAAGA
AATAACCCCTCCTGCACCAGCAGCTCAGGAAAAGGCACCAGTTAGGAGAGAAACTCCAGCAACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCACAGGCAAAGAAAG
CGAGGATCGAACCCAGAAGCCCAGAAAAAGCTGGTAGTAAGGCTGAATCAGCAAAAACACATGATACCATTAGTGATAGGCCTCTTGAAGCTGCTACAACAGGACTAGTT
TCATATAGTGATGAAAGTGAAGATGAAGATTAGCAAGTCGATTCGGCTGTTAGAAATTCCGAAACAATCACCATATTGTATTTAAATTTTTCTGCGTCGAGGTTCTGAAG
CAATGAATCCTTTTTTGTTTGTGGTAATTGTAGCTTGTTAGCTTCATTATATAAATACATGTTCTGACCGTGTTCATTGTTGAAATGCTTTAAACAATCCTCAAGGTTAA
CTAATTCTTGGTGAAATATATAGAGACTTGATTTCCATTA

Protein sequence

Show/hide protein sequence

MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQS
IMLNELKEITPPAPAAQEKAPVRRETPATRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTHDTISDRPLEAATTGLVSYSDESEDED

Tan0001459 (gene) of Snake gourd v1 genome