; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001466 (gene) of Snake gourd v1 genome

Gene IDTan0001466
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionexosome complex exonuclease RRP46 homolog
Genome locationLG02:94221999..94225734
RNA-Seq ExpressionTan0001466
SyntenyTan0001466
Gene Ontology termsGO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0006259 - DNA metabolic process (biological process)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0004540 - ribonuclease activity (molecular function)
GO:0004536 - deoxyribonuclease activity (molecular function)
GO:0004527 - exonuclease activity (molecular function)
GO:0042802 - identical protein binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150286.1 exosome complex exonuclease RRP46 homolog [Cucumis sativus]3.0e-11193.52Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+G VILDPTK+EE+KMKA VHLVFPN+PVSV+PEGSTQ  GEP EHGIITSVT
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

XP_022131722.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia]7.9e-11294.91Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        ME+DRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAI CCLSESG VILDPTKLEEQKMKAFVHLVFPNSPVSVIP+GSTQV  EP EHGIITSVT
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

XP_022951618.1 exosome complex exonuclease RRP46 homolog [Cucurbita moschata]2.1e-11295.83Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIPEGSTQVAGEP E+GIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

XP_023002484.1 exosome complex exonuclease RRP46 homolog [Cucurbita maxima]6.0e-11295.37Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIPEGSTQV GEP E+GIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

XP_023538111.1 exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo]2.3e-11194.91Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        ME+DRDDGRT NQLRPLACSCNVLNRA+GSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIPEGSTQVAGEP E+GIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ9 Uncharacterized protein1.5e-11193.52Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+G VILDPTK+EE+KMKA VHLVFPN+PVSV+PEGSTQ  GEP EHGIITSVT
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

A0A5A7VGL5 Exosome complex exonuclease RRP46-like protein3.2e-11193.06Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+G VILDPTK+EE+KMKA VHLVFPN+PVSV+PEGSTQ  GEP EHG+ITSVT
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

A0A6J1BU99 exosome complex exonuclease RRP46 homolog isoform X13.8e-11294.91Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        ME+DRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAI CCLSESG VILDPTKLEEQKMKAFVHLVFPNSPVSVIP+GSTQV  EP EHGIITSVT
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

A0A6J1GI69 exosome complex exonuclease RRP46 homolog1.0e-11295.83Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIPEGSTQVAGEP E+GIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

A0A6J1KQK5 exosome complex exonuclease RRP46 homolog2.9e-11295.37Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIPEGSTQV GEP E+GIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
        QGAM V+DYIHCLERG
Subjt:  QGAMPVEDYIHCLERG

SwissProt top hitse value%identityAlignment
Q84T68 Exosome complex exonuclease RRP46 homolog5.0e-7766.82Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        ME  R DGR PNQLRP +C+ N L+RAHGSA W+QGDT VLAAVYGPK GT+K ENPEKASIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT++PNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+ +DG+LLPCAINA CAALV AGIPLKHLAVAI C + E G VILD  K EEQ++K+F HLVFPNS  S   +   Q   E  E G+ITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERGV
         G M  EDY  C+ERG+
Subjt:  QGAMPVEDYIHCLERGV

Q9CRA8 Exosome complex component RRP461.0e-2942.21Show/hide
Query:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDG
        LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  G  E+  E +++ T +++ +  ++P T+ ++V+QV+ D G
Subjt:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDG

Query:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFV
        +LL C +NA+C ALVDAG+P++ L   ++C L   G ++LDPT  +E++ +A +
Subjt:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFV

Q9LX74 Exosome complex exonuclease RRP46 homolog2.2e-9676.39Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+PEGS+   GEP EHGIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
         G M V+DY  C+E G
Subjt:  QGAMPVEDYIHCLERG

Q9NQT4 Exosome complex component RRP461.2e-3043.42Show/hide
Query:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDG
        LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  G  E+  E +++ T +++ + T++P T+ ++V+QV+ D G
Subjt:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDG

Query:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKA
        +LL C +NA+C ALVDAG+P++ L   ++C L   G ++LDPT  +E++ +A
Subjt:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKA

Q9SP08 Exosome complex component RRP41 homolog1.2e-1431.76Show/hide
Query:  RDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLER----------ECEMILKRTLQSICIL
        R DGR  N++R +     V+++A GSA +  G+TKV+AAVYGP+    K++  +     V+ +    Q    +R          E  +++++T+++  + 
Subjt:  RDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLER----------ECEMILKRTLQSICIL

Query:  TINPNTTTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAIS
         + P++   I +QV+  DG      INA+  AL DAGIP++ LAV+ S
Subjt:  TINPNTTTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAIS

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein1.5e-9776.39Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+PEGS+   GEP EHGIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
         G M V+DY  C+E G
Subjt:  QGAMPVEDYIHCLERG

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein1.5e-9776.39Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+PEGS+   GEP EHGIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
         G M V+DY  C+E G
Subjt:  QGAMPVEDYIHCLERG

AT3G46210.3 Ribosomal protein S5 domain 2-like superfamily protein1.5e-9776.39Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+PEGS+   GEP EHGIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
         G M V+DY  C+E G
Subjt:  QGAMPVEDYIHCLERG

AT3G46210.4 Ribosomal protein S5 domain 2-like superfamily protein1.5e-9776.39Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+PEGS+   GEP EHGIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
         G M V+DY  C+E G
Subjt:  QGAMPVEDYIHCLERG

AT3G46210.5 Ribosomal protein S5 domain 2-like superfamily protein1.5e-9776.39Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNT

Query:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT
        TTS+++QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+PEGS+   GEP EHGIITS+T
Subjt:  TTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVT

Query:  QGAMPVEDYIHCLERG
         G M V+DY  C+E G
Subjt:  QGAMPVEDYIHCLERG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAGACAGAGATGATGGTCGTACCCCCAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTCAATCGTGCTCATGGCTCCGCCAGTTGGTCGCAAGGTGA
TACGAAAGTTCTTGCTGCAGTCTATGGACCTAAAGCAGGAACAAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCCAAGACAGGGCAAATTG
GAAAACTGGAAAGGGAGTGTGAGATGATATTAAAGAGGACATTGCAGAGTATTTGCATATTAACTATTAATCCCAATACCACCACATCTATTGTTGTTCAGGTTATTCAT
GATGATGGCGCTCTTCTTCCCTGTGCAATTAATGCATCATGTGCTGCCTTAGTAGATGCTGGAATTCCTTTAAAGCATCTTGCTGTTGCAATTTCCTGTTGTTTGTCTGA
GAGTGGATGTGTTATTTTGGATCCAACCAAGCTAGAGGAGCAGAAAATGAAGGCCTTTGTACATTTGGTCTTTCCGAACTCACCTGTTTCGGTAATTCCTGAAGGATCCA
CACAAGTTGCAGGTGAACCTCAGGAGCATGGAATAATAACATCTGTAACTCAGGGTGCAATGCCAGTGGAAGATTATATTCATTGCCTGGAACGGGGCGTGCTGCAACTG
CAAAAATGTCTGCTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
GTAAAAATAAAATAAAATAAATAAGAAAAAGACACTTTTGCCCTAGTATCTTCTTCTCCTTCAGTCTCTCTCAGTCCTCCGAAAATACTCAGACCCGGCGGCGGCGCCTC
CAAAATCTCTCCACCTCTCTGGTTCCTCTCCTCCGCCATCTCTCTCTCTCTCTCTGGTATTCACTTTCTCCTTTCTCTTCACCAACTGTTCCTAGCAGTTCCGCGGCCTT
CTCGTTCATCTCAACTCTAATAAGAACCTCAGCTTCTTCTTTTCCTTTTCAATCTTTCGAAGCCACCGAAGAAAGACCATGGAGATAGACAGAGATGATGGTCGTACCCC
CAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTCAATCGTGCTCATGGCTCCGCCAGTTGGTCGCAAGGTGATACGAAAGTTCTTGCTGCAGTCTATGGACCTA
AAGCAGGAACAAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCCAAGACAGGGCAAATTGGAAAACTGGAAAGGGAGTGTGAGATGATATTA
AAGAGGACATTGCAGAGTATTTGCATATTAACTATTAATCCCAATACCACCACATCTATTGTTGTTCAGGTTATTCATGATGATGGCGCTCTTCTTCCCTGTGCAATTAA
TGCATCATGTGCTGCCTTAGTAGATGCTGGAATTCCTTTAAAGCATCTTGCTGTTGCAATTTCCTGTTGTTTGTCTGAGAGTGGATGTGTTATTTTGGATCCAACCAAGC
TAGAGGAGCAGAAAATGAAGGCCTTTGTACATTTGGTCTTTCCGAACTCACCTGTTTCGGTAATTCCTGAAGGATCCACACAAGTTGCAGGTGAACCTCAGGAGCATGGA
ATAATAACATCTGTAACTCAGGGTGCAATGCCAGTGGAAGATTATATTCATTGCCTGGAACGGGGCGTGCTGCAACTGCAAAAATGTCTGCTTTTTTGAGGAGAAGCTTG
CAGCCCCAACTCCCAATGGATTCTTCAAAAGCTGGCTGATCGGAAGCAAGTCCTTGCCTATGTATTGTGCTCTACGACTTAATCTGGCTGGGAAGGTATCTTCTATTGTA
TGATTTATTTTTGTGATACCCCAAGTCCATGTTAGTTAGGGTTTTCAGGGCTTTGTAATCCAGAGCTGTAACAGGGCATTAATTTAAATGATGATAAAGCATTCAAAGTG
GATTTTATTGGTGCATTGTAC
Protein sequenceShow/hide protein sequence
MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIH
DDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPQEHGIITSVTQGAMPVEDYIHCLERGVLQL
QKCLLF