| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 8.1e-167 | 60.5 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
+SS+ + +L +D+L G N+ +WK+ +N +L++ RFV E+CP++ NA + ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
MFGQ+S QI+H++LKY+YN+RM EG+S SF F NAVMNKI Y TTLLNELQTF+SLMK KG
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
Query: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Q GEAN+ +R+F +GS+SGTKS SSSG KK +KKK G KA AA K A KG CF CN +GHWKRNCPKYL + K+ K+GKMTKRPFTGK
Subjt: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Query: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
G+RA EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI S+L
Subjt: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
Query: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
SAP+TPQQNGVSERRNRTLL MVRSMMSYA LP SFWGYA++TAV ILN +PSKSVSETP +LW G K SL+HFRIWGCP HVL NPKKLEPRS+LC F
Subjt: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
Query: VGYPKETRGGLFYDPQENK
VGYPK TRGG FYDP++NK
Subjt: VGYPKETRGGLFYDPQENK
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| KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-168 | 60.5 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
M+S+ + +L +D+L G N+ +WK+ +NT+L++ RFV EECP++ NA + ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
MFGQ+S QI+H++LKY+YN+RM EG+S SF F NAVMNKI Y TTLLNELQTF+SLMK KG
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
Query: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Q GEAN+ +R+F +GS+SGTKS SSSG KK +KKK G KA AA K A KG CFHCN +GHWKRNCPKYL E K+ K+GKMTKRPFTGK
Subjt: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Query: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
G++A EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI S+L
Subjt: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
Query: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
S P TPQQNGVS+RRNRTLL MVRSMMSY LP SFWGYA++TAV ILN +PSKSVS+TP +LW GRK SL+HFRIWGCP HVL NPKKLEPRS+LC F
Subjt: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
Query: VGYPKETRGGLFYDPQENK
VGYPK TRGG FYDP++NK
Subjt: VGYPKETRGGLFYDPQENK
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| KAA0058447.1 gag/pol protein [Cucumis melo var. makuwa] | 6.2e-151 | 66.2 | Show/hide |
Query: MVSAREIMSSLQEMFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLN
M++AREIM SLQEMFGQ+S QI+H++LKY+YN+RM E +S SF F N VMNKI Y TTLLN
Subjt: MVSAREIMSSLQEMFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLN
Query: ELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-
ELQTF+SLMK KGQ GEAN+ +R+F KGS+SGTKS SSSG KK +KKK G KA AA K A KG CFHCN +GHWKRNCPKYL E K+
Subjt: ELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-
Query: KKGKMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRF
K+GKMTKRPFTGKG+RA EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HK EALEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+F
Subjt: KKGKMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRF
Query: QDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTN
Q+Y++E GI S+LSAP TPQQNGVSERRNRTLL MV+SM+SYA LP SFWGYA++TAV ILN +PSKS SETP +LW G K SL+HFRIWGCP HVL N
Subjt: QDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTN
Query: PKKLEPRSRLCQFVGYPKETRGGLFYDPQENK
PKKLEP S+LC FVGYPK TRGG FYDP++NK
Subjt: PKKLEPRSRLCQFVGYPKETRGGLFYDPQENK
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| KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa] | 5.8e-149 | 55.73 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
M+++ + +L +D+L G N+ +WK+ +N +L++ +FV EECP++ NA Q ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
MFGQ+S QI H++LKY+YN+RM EG+S + V+N + + +N ++ ++GQ GEAN+ +R+F +GS+SGTKS SSSG KK +K
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
Query: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
KK G KA A A KG CFH N +GHWKRNCPKYL E K+ K GKMTKRPFTGKG+RA
Subjt: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
Query: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E I S+LSAP
Subjt: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
Query: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
TPQQNGVSERRNRTLL MVRSM+SYA LP SFWGYA++TAV ILN +PSKSV ETP +LW GRK SL+HFRIWGCP HVL NPKKLEPRS+LC FVGYP
Subjt: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
Query: KETRGGLFYDPQENK
K TRGG FYD ++NK
Subjt: KETRGGLFYDPQENK
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| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 6.2e-151 | 56.12 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
M+++ + +L +D+L G N+ +WK+ +N +L++ +FV EECP++ NA Q ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
MFGQ+S QI H++LKY+YN+RM EG+S + V+N + + +N ++ ++GQ GEAN+ +R+F +GS+SGTKS SSSG KK +K
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
Query: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
KK G KA A A KG CFH N +GHWKRNCPKYL E K+ K GKMTKRPFTGKG+RA
Subjt: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
Query: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E I S+LSAP
Subjt: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
Query: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
TPQQNGVSERRNRTLL MVRSM+SYA LP SFWGYA++TAV ILN +PSKSVSETP +LW GRK SL+HFRIWGCP HVL NPKKLEPRS+LC FVGYP
Subjt: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
Query: KETRGGLFYDPQENK
K TRGG FYDP++NK
Subjt: KETRGGLFYDPQENK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNP8 Gag/pol protein | 3.9e-167 | 60.5 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
+SS+ + +L +D+L G N+ +WK+ +N +L++ RFV E+CP++ NA + ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
MFGQ+S QI+H++LKY+YN+RM EG+S SF F NAVMNKI Y TTLLNELQTF+SLMK KG
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
Query: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Q GEAN+ +R+F +GS+SGTKS SSSG KK +KKK G KA AA K A KG CF CN +GHWKRNCPKYL + K+ K+GKMTKRPFTGK
Subjt: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Query: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
G+RA EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI S+L
Subjt: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
Query: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
SAP+TPQQNGVSERRNRTLL MVRSMMSYA LP SFWGYA++TAV ILN +PSKSVSETP +LW G K SL+HFRIWGCP HVL NPKKLEPRS+LC F
Subjt: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
Query: VGYPKETRGGLFYDPQENK
VGYPK TRGG FYDP++NK
Subjt: VGYPKETRGGLFYDPQENK
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| A0A5A7U869 Gag/pol protein | 3.5e-168 | 60.5 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
M+S+ + +L +D+L G N+ +WK+ +NT+L++ RFV EECP++ NA + ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
MFGQ+S QI+H++LKY+YN+RM EG+S SF F NAVMNKI Y TTLLNELQTF+SLMK KG
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKG
Query: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Q GEAN+ +R+F +GS+SGTKS SSSG KK +KKK G KA AA K A KG CFHCN +GHWKRNCPKYL E K+ K+GKMTKRPFTGK
Subjt: QADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-KKGKMTKRPFTGK
Query: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
G++A EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E GI S+L
Subjt: GYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRL
Query: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
S P TPQQNGVS+RRNRTLL MVRSMMSY LP SFWGYA++TAV ILN +PSKSVS+TP +LW GRK SL+HFRIWGCP HVL NPKKLEPRS+LC F
Subjt: SAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQF
Query: VGYPKETRGGLFYDPQENK
VGYPK TRGG FYDP++NK
Subjt: VGYPKETRGGLFYDPQENK
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| A0A5A7UUN7 Gag/pol protein | 3.0e-151 | 66.2 | Show/hide |
Query: MVSAREIMSSLQEMFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLN
M++AREIM SLQEMFGQ+S QI+H++LKY+YN+RM E +S SF F N VMNKI Y TTLLN
Subjt: MVSAREIMSSLQEMFGQSSGQIRHESLKYVYNSRMKEGSS-------------------------------------SFCNFAKNAVMNKIEYNPTTLLN
Query: ELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-
ELQTF+SLMK KGQ GEAN+ +R+F KGS+SGTKS SSSG KK +KKK G KA AA K A KG CFHCN +GHWKRNCPKYL E K+
Subjt: ELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQKKKIGGKGKAP-AADKI-----ADKGKCFHCNVDGHWKRNCPKYLVELKE-
Query: KKGKMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRF
K+GKMTKRPFTGKG+RA EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HK EALEKFKEYKA+VENAL KTIKT RSDRGGEYMDL+F
Subjt: KKGKMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRF
Query: QDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTN
Q+Y++E GI S+LSAP TPQQNGVSERRNRTLL MV+SM+SYA LP SFWGYA++TAV ILN +PSKS SETP +LW G K SL+HFRIWGCP HVL N
Subjt: QDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTN
Query: PKKLEPRSRLCQFVGYPKETRGGLFYDPQENK
PKKLEP S+LC FVGYPK TRGG FYDP++NK
Subjt: PKKLEPRSRLCQFVGYPKETRGGLFYDPQENK
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| A0A5A7UYX7 Gag/pol protein | 2.8e-149 | 55.73 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
M+++ + +L +D+L G N+ +WK+ +N +L++ +FV EECP++ NA Q ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
MFGQ+S QI H++LKY+YN+RM EG+S + V+N + + +N ++ ++GQ GEAN+ +R+F +GS+SGTKS SSSG KK +K
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
Query: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
KK G KA A A KG CFH N +GHWKRNCPKYL E K+ K GKMTKRPFTGKG+RA
Subjt: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
Query: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E I S+LSAP
Subjt: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
Query: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
TPQQNGVSERRNRTLL MVRSM+SYA LP SFWGYA++TAV ILN +PSKSV ETP +LW GRK SL+HFRIWGCP HVL NPKKLEPRS+LC FVGYP
Subjt: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
Query: KETRGGLFYDPQENK
K TRGG FYD ++NK
Subjt: KETRGGLFYDPQENK
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| A0A5D3BHG7 Gag/pol protein | 3.0e-151 | 56.12 | Show/hide |
Query: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
M+++ + +L +D+L G N+ +WK+ +N +L++ +FV EECP++ NA Q ++E ++ + R+ ++ +KH+ M++AREIM SLQE
Subjt: MSSSIIALLKSDRLTGENFTTWKSNLNTILVLATSRFVSFEECPRI-RRNAPQCIKEATTAGSRPMIRRRSTFWLVFTK-FGQKHKGMVSAREIMSSLQE
Query: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
MFGQ+S QI H++LKY+YN+RM EG+S + V+N + + +N ++ ++GQ GEAN+ +R+F +GS+SGTKS SSSG KK +K
Subjt: MFGQSSGQIRHESLKYVYNSRMKEGSSSFCNFAKNAVMNKIEYNPTTLLNELQTFQSLMKNKGQADGEANLFAHSRRFQKGSSSGTKSCSSSSGLKKTQK
Query: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
KK G KA A A KG CFH N +GHWKRNCPKYL E K+ K GKMTKRPFTGKG+RA
Subjt: KKIGGKGKAPAA------DKIADKGKCFHCNVDGHWKRNCPKYLVELKEKK----------------------------------GKMTKRPFTGKGYRA
Query: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
EPLELVHSDLCGP+NVK RG +EYFI+F DDYSRYGY+YLM HKSEALEKFKEYKAEVENAL KTIKT RSDRGGEYMDL+FQ+Y++E I S+LSAP
Subjt: IEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPN
Query: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
TPQQNGVSERRNRTLL MVRSM+SYA LP SFWGYA++TAV ILN +PSKSVSETP +LW GRK SL+HFRIWGCP HVL NPKKLEPRS+LC FVGYP
Subjt: TPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPSLQHFRIWGCPTHVLVTNPKKLEPRSRLCQFVGYP
Query: KETRGGLFYDPQENK
K TRGG FYDP++NK
Subjt: KETRGGLFYDPQENK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.3e-37 | 36.86 | Show/hide |
Query: GKMTKRPFTG-KGYRAIE-PLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRF
GK + PF K I+ PL +VHSD+CGP+ T YF+ F+D ++ Y YL+ +KS+ F+++ A+ E + L D G EY+
Subjt: GKMTKRPFTG-KGYRAIE-PLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRF
Query: QDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSV---SETPFELWKGRKPSLQHFRIWGCPTHVL
+ + ++ GI L+ P+TPQ NGVSER RT+ R+M+S A+L SFWG A+ TA ++N IPS+++ S+TP+E+W +KP L+H R++G +V
Subjt: QDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSV---SETPFELWKGRKPSLQHFRIWGCPTHVL
Query: VTNPK-KLEPRSRLCQFVGYPKETRGGLFYDPQENK
+ N + K + +S FVGY E G +D K
Subjt: VTNPK-KLEPRSRLCQFVGYPKETRGGLFYDPQENK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.6e-47 | 39.48 | Show/hide |
Query: GKMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQD
GK + F R + L+LV+SD+CGP+ +++ G +YF++FIDD SR ++Y++ K + + F+++ A VE G+ +K LRSD GGEY F++
Subjt: GKMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQD
Query: YMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVS-ETPFELWKGRKPSLQHFRIWGCP--THVLVT
Y HGI+ + P TPQ NGV+ER NRT++ VRSM+ A+LP SFWG A++TA ++N PS ++ E P +W ++ S H +++GC HV
Subjt: YMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVS-ETPFELWKGRKPSLQHFRIWGCP--THVLVT
Query: NPKKLEPRSRLCQFVGYPKETRGGLFYDPQENK
KL+ +S C F+GY E G +DP + K
Subjt: NPKKLEPRSRLCQFVGYPKETRGGLFYDPQENK
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| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 3.8e-18 | 28.46 | Show/hide |
Query: CPKYLVELKEKKGKMTKRPFTGKGYR-----AIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSE--ALEKFKEYKAEVENALGKT
CP L+ GK TK KG R + EP + +H+D+ GPV+ + YFISF D+ +R+ ++Y +H + E L F A ++N
Subjt: CPKYLVELKEKKGKMTKRPFTGKGYR-----AIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSE--ALEKFKEYKAEVENALGKT
Query: IKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPS
+ ++ DRG EY + + GI + + + +GV+ER NRTLL R+++ + LP W A+E + I NS+ S K RK +
Subjt: IKTLRSDRGGEYMDLRFQDYMIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVSETPFELWKGRKPS
Query: LQHFRI----------WGCPTHVLVTNP-KKLEPRSRLCQFVGYPKETRGGLFYDPQENK
QH + +G P V NP K+ PR + + + G + Y P K
Subjt: LQHFRI----------WGCPTHVLVTNP-KKLEPRSRLCQFVGYPKETRGGLFYDPQENK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-32 | 33.8 | Show/hide |
Query: KMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDY
K K PF+ + PLE ++SD+ + + Y Y++ F+D ++RY +LY + KS+ E F +K +EN I T SD GGE++ L +Y
Subjt: KMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDY
Query: MIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVS-ETPFELWKGRKPSLQHFRIWGCPTHVLVT--N
+HGI S P+TP+ NG+SER++R ++ +++S+A +P ++W YA AV ++N +P+ + E+PF+ G P+ R++GC + + N
Subjt: MIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVS-ETPFELWKGRKPSLQHFRIWGCPTHVLVT--N
Query: PKKLEPRSRLCQFVGY
KL+ +SR C F+GY
Subjt: PKKLEPRSRLCQFVGY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-34 | 34.72 | Show/hide |
Query: KMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDY
K K PF+ + +PLE ++SD+ + Y Y++ F+D ++RY +LY + KS+ + F +K+ VEN I TL SD GGE++ LR DY
Subjt: KMTKRPFTGKGYRAIEPLELVHSDLCGPVNVKTRGWYEYFISFIDDYSRYGYLYLMHHKSEALEKFKEYKAEVENALGKTIKTLRSDRGGEYMDLRFQDY
Query: MIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVS-ETPFELWKGRKPSLQHFRIWGCPTHVLVT--N
+ +HGI S P+TP+ NG+SER++R ++ M +++S+A +P ++W YA AV ++N +P+ + ++PF+ G+ P+ + +++GC + + N
Subjt: MIEHGIKSRLSAPNTPQQNGVSERRNRTLLGMVRSMMSYAQLPASFWGYAIETAVQILNSIPSKSVS-ETPFELWKGRKPSLQHFRIWGCPTHVLVT--N
Query: PKKLEPRSRLCQFVGY
KLE +S+ C F+GY
Subjt: PKKLEPRSRLCQFVGY
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