CuGenDBv2

Gene ID	Tan0001504
Organism	Trichosanthes anguina (Snake gourd v1)
Description	tRNA_int_end_N2 domain-containing protein
Genome location	LG10:32422614..32435454
RNA-Seq Expression	Tan0001504
Synteny	Tan0001504
Gene Ontology terms	GO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0000214 - tRNA-intron endonuclease complex (cellular component) GO:0004519 - endonuclease activity (molecular function)
InterPro domains	IPR024336 - tRNA-splicing endonuclease, subunit Sen54, N-terminal IPR024337 - tRNA-splicing endonuclease, subunit Sen54

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596967.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-128

84.96

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECLCS G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DISS+SSI ENKG+TDF SEDE+SI EL+D+ QLNEVTPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKVE P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

KAG7028441.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-128

84.96

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECLCS G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DISS+SSI ENKG+TDF SEDE+SI EL+D+ QLNEVTPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKVE P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

XP_022156818.1 uncharacterized protein LOC111023660 [Momordica charantia]

1.7e-129

85.34

Show/hide

Query:  MEPTDWESSS-GASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWESSS GASGDD+I EQD+ DEEECLC+ G MRKLQFRKHASTARWNDQMGMAEV+EN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLD+
Subjt:  MEPTDWESSS-GASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNG+DIS +SSI EN+GA D ES+DERSISELL S QL++V PIFDVFL
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+KDIE ++RTSRGI +KYCHVEHGRVCFFS DK+E P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

XP_022940787.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita moschata]

3.2e-128

84.59

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECLCS G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG +NG DISS+SSI ENKG+TDF SEDE+SI EL+D+ QLNEVTPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKVE P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

XP_023538818.1 tRNA-splicing endonuclease subunit Sen54-like [Cucurbita pepo subsp. pepo]

4.9e-129

85.34

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECLCS G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DISSRSSI ENKG+TDF SEDE+SI EL+D+ QLNEVTPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKVE P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DRN3 uncharacterized protein LOC111023660

8.1e-130

85.34

Show/hide

Query:  MEPTDWESSS-GASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWESSS GASGDD+I EQD+ DEEECLC+ G MRKLQFRKHASTARWNDQMGMAEV+EN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLD+
Subjt:  MEPTDWESSS-GASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNG+DIS +SSI EN+GA D ES+DERSISELL S QL++V PIFDVFL
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+KDIE ++RTSRGI +KYCHVEHGRVCFFS DK+E P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

A0A6J1FKK4 tRNA-splicing endonuclease subunit Sen54

1.5e-128

84.59

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECLCS G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG +NG DISS+SSI ENKG+TDF SEDE+SI EL+D+ QLNEVTPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKVE P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

A0A6J1I794 tRNA-splicing endonuclease subunit Sen54 isoform X1

9.9e-128

84.59

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECL S G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DISSRSSI ENKG+TDFESEDE+SI ELL++ QLNE+TPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKV+ P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

A0A6J1I8D9 tRNA-splicing endonuclease subunit Sen54 isoform X3

9.9e-128

84.59

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECL S G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DISSRSSI ENKG+TDFESEDE+SI ELL++ QLNE+TPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKV+ P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

A0A6J1ICR8 tRNA-splicing endonuclease subunit Sen54 isoform X2

9.9e-128

84.59

Show/hide

Query:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY
        ME TDWE SS GAS DDD  EQDI++EEECL S G MRKLQFRKHASTARWND+MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLD+
Subjt:  MEPTDWE-SSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL
        DN +LSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DISSRSSI ENKG+TDFESEDE+SI ELL++ QLNE+TPIFDV+L
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP
        PHSKFRKSSPGDPNFMVCLTRGYPPP+ DIEVI+R S GIPMKYCHVEHGRVCFFS DKV+ P LP
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

SwissProt top hits

e value

%identity

Alignment

O74908 Probable tRNA-splicing endonuclease subunit sen54

4.2e-06

35.58

Show/hide

Query:  MRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALHLLDYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSL
        + +L   KHA  A WN Q GM+ V +  G L+ T G      +++   EETL+L+E G++     + L +SL+ VY   +    G L E + VY HL+  
Subjt:  MRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALHLLDYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSL

Query:  GFIV
        GF V
Subjt:  GFIV

Q74ZJ5 tRNA-splicing endonuclease subunit SEN54

3.9e-04

29.41

Show/hide

Query:  ARWNDQMGMAEVVENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGAL----------HLLDYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGF
        A W ++  MA +   +GS   T G V + G+ +  + E ++L+E G +             +++++ LS++DVY   +  +     ++F VY HLK LGF
Subjt:  ARWNDQMGMAEVVENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGAL----------HLLDYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGF

Query:  IV
        IV
Subjt:  IV

Arabidopsis top hits

e value

%identity

Alignment

AT3G02370.1 unknown protein

6.3e-42

49.7

Show/hide

Query:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGN
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D++ +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGN

Query:  DISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFLPHSKFRKSSPGDPNFMVCLT
          ++ S   E+  A +F  +D  S+++LL    + +  P+FDV+LP+S+F+KSSPG+P+F+ C +
Subjt:  DISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFLPHSKFRKSSPGDPNFMVCLT

AT3G02370.2 unknown protein

5.2e-44

48.3

Show/hide

Query:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGN
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D++ +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DYDNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGN

Query:  DISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFLPHSKFRKSSPGDPNFMVCLTRGYPPPRKDIE
          ++ S   E+  A +F  +D  S+++LL    + +  P+FDV+LP+S+F+KSSPG+P+F+ C +   PP +++I+
Subjt:  DISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFLPHSKFRKSSPGDPNFMVCLTRGYPPPRKDIE

AT3G57360.1 unknown protein

2.2e-58

42.11

Show/hide

Query:  MEPTDWESSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DY
        ME  DWE+SS +  +         D++E   S G + KLQFR  +S ARW  ++GMAEV   +G LWTTTGI+R GK YC IEE L+L E+G L +L + 
Subjt:  MEPTDWESSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DY

Query:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFE-SEDERSISELLDSTQLNEVTPIFDVF
        D++ + LKD+Y+K+AE K+GC WE +EVYR+LK LG+I+G+H V W++K     N         E + A   E   D  ++++LL   Q+ +   +FDV+
Subjt:  DNLNLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFE-SEDERSISELLDSTQLNEVTPIFDVF

Query:  LPHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPAL
        LP+S+F+KSSPG+P+F+ C +   PP ++DI+V+ +     P+ +CH+  GR  FFS   ++ P L
Subjt:  LPHSKFRKSSPGDPNFMVCLTRGYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGCCTACGGATTGGGAAAGCTCTTCAGGAGCTAGTGGCGATGACGACATTTGCGAGCAAGACATAAGAGATGAAGAAGAATGTCTTTGTTCATTTGGGTACATGCG
CAAGTTGCAATTCAGGAAGCATGCTTCGACTGCTCGATGGAATGATCAGATGGGAATGGCAGAAGTTGTAGAGAACAAGGGCAGCCTTTGGACGACGACTGGCATTGTAC
GTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTATTTCTTATTGAAGTTGGGGCCTTGCATCTTCTGGATTATGATAATTTAAATCTTTCTTTGAAAGATGTATAT
AAGAAGGTAGCTGAAGGAAAAAATGGATGTCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTCAGT
GAAGGGTGTTAGGAATGGAAATGACATTTCTTCTCGAAGTTCTATATTTGAGAACAAAGGAGCGACAGATTTTGAATCAGAAGATGAGAGGTCGATCTCTGAGCTATTAG
ATTCCACTCAACTCAATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAGCAAGTTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACTAGG
GGATACCCACCTCCAAGAAAAGATATTGAAGTTATTGATAGAACATCGAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGTGTTTGTTTCTTCTCACTTGA
TAAGGTGGAGTCGCCTGCCTTACCGTGA

mRNA sequence

Show/hide mRNA sequence

GTTGAACTGAACGAAAAAAAATCCCGAGGTCCTATCTTCTTCTCTTCTTCTCTTCTTCTCCTCCCTCTTTCTCGTGCAAGTCGCCTTTCCCCTCCACCCTTCGATTTTTG
CTTCTTCCTAGGCTGACCCACGCGACACCTAGACTGAACCAGTGGCGACTTCTTCGTCGTGTCGTGCCTCACTCCGACGACGAGCGATTTTCCAGCAAGCGTGCACAGAG
AGATCGTGACCCATGGCGTTGGAAAACAGTGTTTTTGGCATCGTCCGACCCATACCCATGGTGATTTGCGACTAGATTTGCGAGGCTCTTGATGGCGTTCCATTCTTCGG
TGTTCTGACCTAGATCCACGAAGGTTGTGGTAGATTCGCAAGTTTCGAGTCCCATTCCCGGTGACCCACGCGAGGATTCGAAAATTCCAGCCTTGCCCACATAAGATATT
GCAACCCACACACTCCAACTACCAGATCTGCAAGCGTTGAAAGCTTACGACACTATTTTGACTCCTTGTGCTTTACTCAGTTCATTCTTCTTGATCTTCAGAAACTTGCT
TCTGTCCACAAATTTGAAGTTATCAATTCCAACGAGCATTTTTATAACCAAACAATTTAGAGGAGTTTTCTTATGGAGCCTACGGATTGGGAAAGCTCTTCAGGAGCTAG
TGGCGATGACGACATTTGCGAGCAAGACATAAGAGATGAAGAAGAATGTCTTTGTTCATTTGGGTACATGCGCAAGTTGCAATTCAGGAAGCATGCTTCGACTGCTCGAT
GGAATGATCAGATGGGAATGGCAGAAGTTGTAGAGAACAAGGGCAGCCTTTGGACGACGACTGGCATTGTACGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTA
TTTCTTATTGAAGTTGGGGCCTTGCATCTTCTGGATTATGATAATTTAAATCTTTCTTTGAAAGATGTATATAAGAAGGTAGCTGAAGGAAAAAATGGATGTCTTTGGGA
GCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTCAGTGAAGGGTGTTAGGAATGGAAATGACATTTCTTCTCGAA
GTTCTATATTTGAGAACAAAGGAGCGACAGATTTTGAATCAGAAGATGAGAGGTCGATCTCTGAGCTATTAGATTCCACTCAACTCAATGAAGTGACACCCATTTTTGAT
GTTTTTCTTCCACATAGCAAGTTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACTAGGGGATACCCACCTCCAAGAAAAGATATTGAAGTTATTGA
TAGAACATCGAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGTGTTTGTTTCTTCTCACTTGATAAGGTGGAGTCGCCTGCCTTACCGTGA

Protein sequence

Show/hide protein sequence

MEPTDWESSSGASGDDDICEQDIRDEEECLCSFGYMRKLQFRKHASTARWNDQMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDYDNLNLSLKDVY
KKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGNDISSRSSIFENKGATDFESEDERSISELLDSTQLNEVTPIFDVFLPHSKFRKSSPGDPNFMVCLTR
GYPPPRKDIEVIDRTSRGIPMKYCHVEHGRVCFFSLDKVESPALP

Tan0001504 (gene) of Snake gourd v1 genome