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Tan0001505 (gene) of Snake gourd v1 genome

Gene IDTan0001505
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationLG04:43916902..43925733
RNA-Seq ExpressionTan0001505
SyntenyTan0001505
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051909.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.3e-2066.28Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL + +DGT ++KSVQ +
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI

KAA0063387.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.9e-2056.73Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL
        DV+   + LHVPEG IT+ KAKKIQ+AFT+H+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL +L+D T+++K    I   F + ++  HPL
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL

Query:  ADSL
           L
Subjt:  ADSL

KAA0067206.1 hypothetical protein E6C27_scaffold418G00080 [Cucumis melo var. makuwa]2.9e-2066.28Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ E K FEPK LYNVS+ SQ+E+ +KMA EKL SL+DGT D+KSVQ +
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI

TYK02449.1 F15O4.13 [Cucumis melo var. makuwa]1.6e-2167.44Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL +L+DGT+++KSVQ +
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI

TYK08102.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]5.9e-2158.65Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL +L+DGT ++K    I   F + ++  HPL
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL

Query:  ADSL
           L
Subjt:  ADSL

TrEMBL top hitse value%identityAlignment
A0A5A7UEI2 Transposon Ty3-I Gag-Pol polyprotein6.4e-2166.28Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL + +DGT ++KSVQ +
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI

A0A5A7V8R2 Transposon Ty3-I Gag-Pol polyprotein1.4e-2056.73Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL
        DV+   + LHVPEG IT+ KAKKIQ+AFT+H+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL +L+D T+++K    I   F + ++  HPL
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL

Query:  ADSL
           L
Subjt:  ADSL

A0A5A7VL78 RT_RNaseH_2 domain-containing protein1.4e-2066.28Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ E K FEPK LYNVS+ SQ+E+ +KMA EKL SL+DGT D+KSVQ +
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI

A0A5D3BWE8 F15O4.137.5e-2267.44Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL +L+DGT+++KSVQ +
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKI

A0A5D3C9X5 Transposon Ty3-I Gag-Pol polyprotein2.9e-2158.65Show/hide
Query:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL
        DV+   + LHVPEG IT+ KAKKIQ+AFTLH+QKL NAQ ETK FE K LYNVS+ SQ+E+GVKMAREKL +L+DGT ++K    I   F + ++  HPL
Subjt:  DVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIELVGRHPL

Query:  ADSL
           L
Subjt:  ADSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGATTACCTCATTTGTACTAATTACAGTGGGTCGCATCCATGGTGATGTGAATCAAACCATTGATCCATTGCATGTACCTGAAGGAGCAATAACAAGGAGCAA
GGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAA
GTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATTAGCTTATCATTTGGTATCGAG
CTCGTTGGTCGACATCCTTTGGCCGACTCTCTAGAGGTGAAATATCTTCAATTTGCTTTACTTTATTTTCTTTCATTTTTTTATCATTTACAAAAAAAAGTTCCGCAAGT
GGTAGATCCAAATATGACTATTCTTCAAGCAATTCAAGGTATGATAGAGATGATGAGAGAAGAAAGGGAAGAAAGGAGAGCACAACAACAAAGAGAAGAACGGATCTTGC
AAGAAGATGAAGGCATGTTTGATTTACAGGTACAAGAAAGAAACTTAGGAGGAAGAGGAAATGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTG
AATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTT
GAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATGTTTGATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGATTACCTCATTTGTACTAATTACAGTGGGTCGCATCCATGGTGATGTGAATCAAACCATTGATCCATTGCATGTACCTGAAGGAGCAATAACAAGGAGCAA
GGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTGAATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAA
GTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTTGAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATTAGCTTATCATTTGGTATCGAG
CTCGTTGGTCGACATCCTTTGGCCGACTCTCTAGAGGTGAAATATCTTCAATTTGCTTTACTTTATTTTCTTTCATTTTTTTATCATTTACAAAAAAAAGTTCCGCAAGT
GGTAGATCCAAATATGACTATTCTTCAAGCAATTCAAGGTATGATAGAGATGATGAGAGAAGAAAGGGAAGAAAGGAGAGCACAACAACAAAGAGAAGAACGGATCTTGC
AAGAAGATGAAGGCATGTTTGATTTACAGGTACAAGAAAGAAACTTAGGAGGAAGAGGAAATGCCAAGAAGATTCAACAGGCTTTCACATTGCATCTCCAAAAACTCGTG
AATGCACAAGGAGAAACCAAGATTTTTGAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGGAAAAGTTGTCTAGTTT
GAAAGATGGCACGAAGGACAAAAAAAGTGTGCAGAAAATGTTTGATGTTTAA
Protein sequenceShow/hide protein sequence
MSWITSFVLITVGRIHGDVNQTIDPLHVPEGAITRSKAKKIQQAFTLHLQKLVNAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKISLSFGIE
LVGRHPLADSLEVKYLQFALLYFLSFFYHLQKKVPQVVDPNMTILQAIQGMIEMMREEREERRAQQQREERILQEDEGMFDLQVQERNLGGRGNAKKIQQAFTLHLQKLV
NAQGETKIFEPKILYNVSTTSQDENGVKMAREKLSSLKDGTKDKKSVQKMFDV