; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001528 (gene) of Snake gourd v1 genome

Gene IDTan0001528
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationLG11:3592834..3593205
RNA-Seq ExpressionTan0001528
SyntenyTan0001528
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039441.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]4.0e-3369.35Show/hide
Query:  MNSKTNTLPNPLRNL-RRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTK
        M+SKTNTLPNPLRN  RR+TKRSL  SRRRFHRRH             GD+T   S+VS KLEALQSLIPPQSAA HG  RQ ++LFK+TADYIV+LKT+
Subjt:  MNSKTNTLPNPLRNL-RRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTK

Query:  VVILQKLVDFFGSGCSDTENAVVS
        VVILQKLVDFFGS CSD+ +AVVS
Subjt:  VVILQKLVDFFGSGCSDTENAVVS

KAF9830099.1 hypothetical protein H0E87_023461 [Populus deltoides]1.7e-1249.07Show/hide
Query:  LRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFG
        + ++  K+K SL  + RR  RR    A +A   I NG  T S S VS KLEAL++LIP  +A  +G   + +QLFKETADYIVLL+T+VV+LQ LV+F+G
Subjt:  LRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFG

Query:  SGCSDTEN
        S   + EN
Subjt:  SGCSDTEN

KAG6578552.1 hypothetical protein SDJN03_23000, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2872.03Show/hide
Query:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIV
        M+ KTNT    L NLR  TKRSLPDSRRRFHRRH  +A+RAP+P  NG TT SS       DVSAKLEALQSLIP QSA      RQTEQLFKETADYIV
Subjt:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIV

Query:  LLKTKVVILQKLVDFFGS
        LLKT+VVILQKLVDFFGS
Subjt:  LLKTKVVILQKLVDFFGS

KAG7016112.1 hypothetical protein SDJN02_21216, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2872.03Show/hide
Query:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIV
        M+ KTNT    L NLR  TKRSLPDSRRRFHRRH  +A+RAP+P  NG+TT SS       DVSAKLEALQSLIP QSA      RQTEQLFKETADYIV
Subjt:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIV

Query:  LLKTKVVILQKLVDFFGS
        LLKT+VVILQKLVDFFGS
Subjt:  LLKTKVVILQKLVDFFGS

XP_022993697.1 uncharacterized protein LOC111489609 [Cucurbita maxima]1.7e-2061.79Show/hide
Query:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS-----------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKET
        M  KT T    L NLR +TKRSLPDS           A+RAP+P   G+TT SS            DVSAKLEALQSLIP QSA     ARQTEQLFKET
Subjt:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS-----------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKET

Query:  ADYIVLLKTKVVILQKLVDFFGS
        ADYIVLLKT+VVILQKLVDFFGS
Subjt:  ADYIVLLKTKVVILQKLVDFFGS

TrEMBL top hitse value%identityAlignment
A0A2K1X5J6 Uncharacterized protein5.4e-1247.22Show/hide
Query:  LRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFG
        + ++  K+K SL  + RR  RR    A +A   I NG  T S S VS KLEAL++LIP  +   +G   + +QLFKETADYI+LL+T+VV+LQ LV+F+G
Subjt:  LRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFG

Query:  SGCSDTEN
        S   + EN
Subjt:  SGCSDTEN

A0A5A7UT08 Transcription factor UPBEAT1-like1.3e-1047.71Show/hide
Query:  RRKTKRS-LPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGC
        ++ T+R+ LP  + R  R H            NG     +SD+SAKLE+LQSLIP  S +D  G R+ E LFK+TADYIVLLK++V +LQ+L++F+GS  
Subjt:  RRKTKRS-LPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGC

Query:  SDTENAVVS
         D ENAV S
Subjt:  SDTENAVVS

A0A5D3BNP5 Transcription factor UPBEAT1-like1.9e-3369.35Show/hide
Query:  MNSKTNTLPNPLRNL-RRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTK
        M+SKTNTLPNPLRN  RR+TKRSL  SRRRFHRRH             GD+T   S+VS KLEALQSLIPPQSAA HG  RQ ++LFK+TADYIV+LKT+
Subjt:  MNSKTNTLPNPLRNL-RRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTK

Query:  VVILQKLVDFFGSGCSDTENAVVS
        VVILQKLVDFFGS CSD+ +AVVS
Subjt:  VVILQKLVDFFGSGCSDTENAVVS

A0A6I9UIV7 uncharacterized protein LOC1051773606.0e-1148.11Show/hide
Query:  KTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGCSDT
        K + S P + RR  RR   +  R  +    G    ++S VS KLEAL+SLIP Q A       + EQLFKETADYIVLLKT+V++LQKLVDF+G+     
Subjt:  KTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGCSDT

Query:  ENAVVS
         +AV+S
Subjt:  ENAVVS

A0A6J1JTK8 uncharacterized protein LOC1114896098.4e-2161.79Show/hide
Query:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS-----------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKET
        M  KT T    L NLR +TKRSLPDS           A+RAP+P   G+TT SS            DVSAKLEALQSLIP QSA     ARQTEQLFKET
Subjt:  MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSS-----------SDVSAKLEALQSLIPPQSAADHGGARQTEQLFKET

Query:  ADYIVLLKTKVVILQKLVDFFGS
        ADYIVLLKT+VVILQKLVDFFGS
Subjt:  ADYIVLLKTKVVILQKLVDFFGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein6.2e-0842.42Show/hide
Query:  VSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGCSDTENAVV
        V  KL AL+SL+PP     + G  +TE+LF+ETA+YIV L+T+VV+L+KL++ + +     ++ V+
Subjt:  VSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGCSDTENAVV

AT5G39240.1 unknown protein1.5e-0941.46Show/hide
Query:  TPSSSDVSAKLEALQSLIPPQS-----------AADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGCSDTENAV
        T      S KL+AL+SL+PP S             +     +TEQLF+ETADYIV L+ +VV+LQKL++ +GS     +N V
Subjt:  TPSSSDVSAKLEALQSLIPPQS-----------AADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFFGSGCSDTENAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCAAAACCAACACACTCCCAAATCCTCTCAGAAACCTCAGAAGAAAAACCAAACGATCCCTACCGGATTCCCGCCGGCGCTTCCACCGCCGTCACTGCCCCGC
CGCCATCCGAGCTCCCGATCCCATCAACAATGGCGATACAACGCCCTCCTCCTCCGATGTCTCGGCCAAGTTGGAGGCCTTGCAGAGCCTCATTCCGCCCCAATCCGCCG
CCGACCACGGCGGGGCTCGCCAAACGGAGCAGCTGTTCAAGGAAACCGCCGATTACATTGTTCTATTGAAAACCAAGGTCGTCATTTTGCAGAAGCTGGTTGATTTTTTT
GGATCCGGCTGCAGCGACACTGAAAACGCCGTCGTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCAAAACCAACACACTCCCAAATCCTCTCAGAAACCTCAGAAGAAAAACCAAACGATCCCTACCGGATTCCCGCCGGCGCTTCCACCGCCGTCACTGCCCCGC
CGCCATCCGAGCTCCCGATCCCATCAACAATGGCGATACAACGCCCTCCTCCTCCGATGTCTCGGCCAAGTTGGAGGCCTTGCAGAGCCTCATTCCGCCCCAATCCGCCG
CCGACCACGGCGGGGCTCGCCAAACGGAGCAGCTGTTCAAGGAAACCGCCGATTACATTGTTCTATTGAAAACCAAGGTCGTCATTTTGCAGAAGCTGGTTGATTTTTTT
GGATCCGGCTGCAGCGACACTGAAAACGCCGTCGTTTCATAA
Protein sequenceShow/hide protein sequence
MNSKTNTLPNPLRNLRRKTKRSLPDSRRRFHRRHCPAAIRAPDPINNGDTTPSSSDVSAKLEALQSLIPPQSAADHGGARQTEQLFKETADYIVLLKTKVVILQKLVDFF
GSGCSDTENAVVS