; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001534 (gene) of Snake gourd v1 genome

Gene IDTan0001534
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChaperone ClpB, putative
Genome locationLG01:100789801..100793278
RNA-Seq ExpressionTan0001534
SyntenyTan0001534
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2287268.1 hypothetical protein GH714_039494 [Hevea brasiliensis]1.5e-1943.03Show/hide
Query:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------VSL
        +K ISL+MGSLVAG K    FE RL  VL +VT+S+ QIILFID++H++     T GAM A  G+LLKPMLG+                        + L
Subjt:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------VSL

Query:  IDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
        +D  A  LK++ITS+  EL +  + V K+++EK +L++D D  +KER  K++ DLS   +KQKEL
Subjt:  IDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

XP_009363816.1 PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpB3, mitochondrial [Pyrus x bretschneideri]1.1e-1435.45Show/hide
Query:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK---------------------------
        +K ISL+MGSLVAG K    FE RL  VL +VT+S+ QIILFID++H++     T GAM A  G+LLKPMLG+                           
Subjt:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK---------------------------

Query:  ---------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
                             + L+D     LK++ITS+  EL +    V K+++EK ++++D D  +K+R  K++ DL++  +KQKEL
Subjt:  ---------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

XP_020572361.1 chaperone protein ClpB3, mitochondrial-like [Phalaenopsis equestris]7.1e-1431.42Show/hide
Query:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK---------------------------
        +K ISL+MGSL+AG K    FE RL  VL +VTSS+ QIILFID++H++     TGGAM A  G+LLKPMLG+                           
Subjt:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK---------------------------

Query:  ----------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDD
                                                                  + L+D  A  LK++ITS+ IEL +  + + K+++EK +L++D
Subjt:  ----------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDD

Query:  RDDVNKERSRKIDPDLSLSNKKQKEL
         D  +KER  K++ DL++  +KQKEL
Subjt:  RDDVNKERSRKIDPDLSLSNKKQKEL

XP_020996814.1 chaperone protein ClpB3, chloroplastic isoform X2 [Arachis duranensis]1.1e-1434.25Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        + L  ++ ISL+MG+L+AG K   +FE RL  VL +VT S+ Q ILFID++H++     T GAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  -------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
                     + L+D  A  LK++ITS+   L + ++ V K+++E+ +L +D D  +++R  +++ +LSL  +KQ EL
Subjt:  -------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

XP_026454718.1 chaperone protein ClpB3, mitochondrial-like [Papaver somniferum]1.3e-1532.05Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        +TL  +K ISL+MGSL+AG K H +FE RL  VL +VT+S+ QIILFID++H++      GGAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF
                                                                       + L+D  A  LK++ITS+  EL +  + V K+++EK 
Subjt:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF

Query:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKELLNN
        +L++D D  +KER  K++ DLSL  +KQKEL N+
Subjt:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKELLNN

TrEMBL top hitse value%identityAlignment
A0A0D9VD04 Clp R domain-containing protein4.0e-1532.84Show/hide
Query:  LSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------
        L  ++ ISL+MG+L+AG K    FE RL  VL +VT+S+ QIILFID++H++      GGAM A  G+LLKPMLG+                        
Subjt:  LSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------

Query:  ---------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKE
                                         + L+D  A  LK++ITS+ +EL +  + + ++++EK +L++D D  +KER RK++ DL    +KQK 
Subjt:  ---------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKE

Query:  L
        L
Subjt:  L

A0A0R0JI83 Uncharacterized protein1.3e-1331.17Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        K + LK  ISL+MGSL+AG K    FE RL  VL +VT+S  QIILFID++H++     T GAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF
                                                                       + L+D  A  LK++ITS+  EL +  + + K+++EK 
Subjt:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF

Query:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
        +L++D D  +KER  K++ DLSL  +KQKEL
Subjt:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

A0A2I0XAH4 Chaperone protein ClpB3, mitochondrial4.5e-1431.42Show/hide
Query:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK---------------------------
        +K ISL+MGSL+AG K    FE RL  VL +VTSS+ QIILFID++H++     TGGAM A  G+LLKPMLG+                           
Subjt:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK---------------------------

Query:  ----------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDD
                                                                  + L+D  A  LK++ITS+ IEL +  + + K+++EK +L++D
Subjt:  ----------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDD

Query:  RDDVNKERSRKIDPDLSLSNKKQKEL
         D  +KER  K++ DL +  +KQKEL
Subjt:  RDDVNKERSRKIDPDLSLSNKKQKEL

A0A6A6KH80 Clp R domain-containing protein7.1e-2043.03Show/hide
Query:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------VSL
        +K ISL+MGSLVAG K    FE RL  VL +VT+S+ QIILFID++H++     T GAM A  G+LLKPMLG+                        + L
Subjt:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------VSL

Query:  IDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
        +D  A  LK++ITS+  EL +  + V K+++EK +L++D D  +KER  K++ DLS   +KQKEL
Subjt:  IDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

A0A6P5NJM5 chaperone protein ClpB3, chloroplastic isoform X25.3e-1534.25Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        + L  ++ ISL+MG+L+AG K   +FE RL  VL +VT S+ Q ILFID++H++     T GAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  -------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
                     + L+D  A  LK++ITS+   L + ++ V K+++E+ +L +D D  +++R  +++ +LSL  +KQ EL
Subjt:  -------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

SwissProt top hitse value%identityAlignment
P74459 Chaperone protein ClpB 14.0e-1249.38Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTG--GAMSAGHGDLLKPMLGKVSL
        ++L  ++ ISL+MGSL+AG K   +FE RL  V+ +VT+SD QIILFID+VH++    G  G+ S   G+LLKPML +  L
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTG--GAMSAGHGDLLKPMLGKVSL

Q0E3C8 Chaperone protein ClpB3, mitochondrial7.3e-1428.82Show/hide
Query:  LSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------
        L  +K ISL+MG+L+AG K   +FE RL  VL ++T+S+ QIILFID++H+I      GGAM A  G+LLKPMLG+                        
Subjt:  LSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK------------------------

Query:  -------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNL
                                                                     + L+D  A  LK++ITS+ IEL +  + + ++++EK +L
Subjt:  -------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKFNL

Query:  RDDRDDVNKERSRKIDPDLSLSNKKQKEL
        ++D D  +K+R  K++ DL    +KQK L
Subjt:  RDDRDDVNKERSRKIDPDLSLSNKKQKEL

Q75GT3 Chaperone protein ClpB2, chloroplastic3.1e-1227.27Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        + L+ ++ I+L+MG+L+AG K   +FE RL  VL +VT SD Q ILFID++H++     T GAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF
                                                                       + L+D  A  LK++ITS+   L +  + V K+++E+ 
Subjt:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF

Query:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
        +L +D D  +++R  +I+ +LSL  +KQK+L
Subjt:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

Q7NFE9 Chaperone protein ClpB1.2e-1148.15Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGKVSL
        ++L  +K I+L+MG+L+AG K   +FE RL  VL++VT S+ QI+LFID++H++     T GAM A  G+LLKPML +  L
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGKVSL

Q9LF37 Chaperone protein ClpB3, chloroplastic2.4e-1228.14Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        + L  +K ISL+MG+L+AG K   +FE RL  VL +VT S+ QIILFID++H++     T GAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF
                                                                       + L+D  A  LK++ITS+   L +  + V K+++E+ 
Subjt:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF

Query:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
        +L +D D  ++ER  +I+ +L L  +KQ EL
Subjt:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

Arabidopsis top hitse value%identityAlignment
AT1G74310.1 heat shock protein 1013.3e-0944Show/hide
Query:  KFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGKVSL
        + ISL+MG+LVAG K   +FE RL  VL +V  ++ ++ILFID++H +     T G+M A   +L KPML +  L
Subjt:  KFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGKVSL

AT2G25140.1 casein lytic proteinase B41.7e-1048.68Show/hide
Query:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGKVSL
        +K ISL+MGSL+AG K    FE RL  V+ +V++S+ Q ILFID++H++       GAM A   +LLKPMLG+  L
Subjt:  KKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGKVSL

AT3G48870.1 Clp ATPase1.1e-0737.97Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTGGAMSAGHGDLLKPMLGKVSL
        +T+  K  I+L+MG LVAG K   +FE RL  +++++  SD +IILFID+VH++        +    ++LKP L +  L
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTGGAMSAGHGDLLKPMLGKVSL

AT5G15450.1 casein lytic proteinase B31.7e-1328.14Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------
        + L  +K ISL+MG+L+AG K   +FE RL  VL +VT S+ QIILFID++H++     T GAM A  G+LLKPMLG+                      
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSI--RNNTGGAMSAGHGDLLKPMLGK----------------------

Query:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF
                                                                       + L+D  A  LK++ITS+   L +  + V K+++E+ 
Subjt:  ---------------------------------------------------------------VSLIDGVAIHLKIKITSRLIELKKTHKIVSKIKLEKF

Query:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL
        +L +D D  ++ER  +I+ +L L  +KQ EL
Subjt:  NLRDDRDDVNKERSRKIDPDLSLSNKKQKEL

AT5G50920.1 CLPC homologue 12.1e-0839.24Show/hide
Query:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTGGAMSAGHGDLLKPMLGKVSL
        +T+  KK I+L+MG LVAG K   +FE RL  +++++  SD +IILFID+VH++        +    ++LKP L +  L
Subjt:  KTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTGGAMSAGHGDLLKPMLGKVSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAATTAAAACTTTGAGCTTAAAGAAGTTTATATCTCTGAATATGGGGTCGTTGGTTGCTGGTGAAAAGCAACATGATAAGTTTGAAAGAAGATTGATGGATGT
GTTGGATAAAGTTACTAGTTCCGACAGACAGATTATTTTGTTCATAGATGATGTTCACAGTATAAGAAATAACACTGGCGGTGCCATGAGTGCTGGTCATGGTGACCTCT
TGAAACCGATGCTTGGTAAAGTTAGTCTTATTGATGGAGTTGCTATACATCTAAAGATAAAAATCACTTCTAGGCTTATTGAATTGAAGAAGACCCATAAAATTGTTTCG
AAGATAAAGCTAGAGAAATTCAACCTAAGAGATGATAGAGATGATGTCAACAAAGAAAGGTCAAGAAAAATCGATCCAGATCTAAGTTTATCAAATAAAAAACAAAAAGA
ATTACTAAACAATGGAACTGCGAAAAGTCTCTCAGGACTCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAATTAAAACTTTGAGCTTAAAGAAGTTTATATCTCTGAATATGGGGTCGTTGGTTGCTGGTGAAAAGCAACATGATAAGTTTGAAAGAAGATTGATGGATGT
GTTGGATAAAGTTACTAGTTCCGACAGACAGATTATTTTGTTCATAGATGATGTTCACAGTATAAGAAATAACACTGGCGGTGCCATGAGTGCTGGTCATGGTGACCTCT
TGAAACCGATGCTTGGTAAAGTTAGTCTTATTGATGGAGTTGCTATACATCTAAAGATAAAAATCACTTCTAGGCTTATTGAATTGAAGAAGACCCATAAAATTGTTTCG
AAGATAAAGCTAGAGAAATTCAACCTAAGAGATGATAGAGATGATGTCAACAAAGAAAGGTCAAGAAAAATCGATCCAGATCTAAGTTTATCAAATAAAAAACAAAAAGA
ATTACTAAACAATGGAACTGCGAAAAGTCTCTCAGGACTCGTATGA
Protein sequenceShow/hide protein sequence
MDGIKTLSLKKFISLNMGSLVAGEKQHDKFERRLMDVLDKVTSSDRQIILFIDDVHSIRNNTGGAMSAGHGDLLKPMLGKVSLIDGVAIHLKIKITSRLIELKKTHKIVS
KIKLEKFNLRDDRDDVNKERSRKIDPDLSLSNKKQKELLNNGTAKSLSGLV