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Tan0001551 (gene) of Snake gourd v1 genome

Gene IDTan0001551
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:24485334..24485837
RNA-Seq ExpressionTan0001551
SyntenyTan0001551
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057194.1 hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa]4.3e-1441.1Show/hide
Query:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD
        M L+DWELLDCHED E+K                         S  +N +                      +SGQKLI D KK         E ++  +
Subjt:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD

Query:  AEV-KEEGVNSRR-MKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
         EV +EE  NSRR M MA EK+++ GRA +CSFGIAVAATIC+VLLGSHSH  GG    NK+H
Subjt:  AEV-KEEGVNSRR-MKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
KGN59752.1 hypothetical protein Csa_001232 [Cucumis sativus]2.7e-1640.37Show/hide
Query:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD
        M L+DWELLDCHED +++ S                                           +  E++V  +SGQKLIGD K +       AE DV ++
Subjt:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD

Query:  AEVKEEGVNSRRMKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
         +V   G     M MAMEKR++WGR  +CSFGIAVAATIC+VLLGSHSH  GG    NK+H
Subjt:  AEVKEEGVNSRRMKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
TrEMBL top hitse value%identityAlignment
A0A0A0LG95 Uncharacterized protein1.3e-1640.37Show/hide
Query:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD
        M L+DWELLDCHED +++ S                                           +  E++V  +SGQKLIGD K +       AE DV ++
Subjt:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD

Query:  AEVKEEGVNSRRMKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
         +V   G     M MAMEKR++WGR  +CSFGIAVAATIC+VLLGSHSH  GG    NK+H
Subjt:  AEVKEEGVNSRRMKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
A0A5D3D5E0 Uncharacterized protein2.1e-1441.1Show/hide
Query:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD
        M L+DWELLDCHED E+K                         S  +N +                      +SGQKLI D KK         E ++  +
Subjt:  MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDD

Query:  AEV-KEEGVNSRR-MKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
         EV +EE  NSRR M MA EK+++ GRA +CSFGIAVAATIC+VLLGSHSH  GG    NK+H
Subjt:  AEV-KEEGVNSRR-MKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGG---ANKQH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTCAACGATTGGGAACTCCTCGATTGCCATGAAGATGGCGAGAAAAAACTCAGCTCTGCCAAACTCGGTGTCGATCAGAAGATGGCTTTCGAGTTAAACGATAC
TGATCGATCTATTTCCGTTTCAGATCAACAAAACACGATCACTGGCAGAGCGGCTTGCGATATACAACAAATCAGTGTGCAAGATGATGAAGACATCGTTTCACAAGTTT
CCGGCCAGAAACTGATCGGCGACATGAAAAAGGACTCCGCTAGGTTTTGTACCGGCGCAGAATCAGATGTGCACGATGACGCAGAAGTCAAGGAGGAGGGCGTAAATTCA
AGAAGAATGAAAATGGCGATGGAGAAGAGACAAAAATGGGGGAGAGCGGCCATTTGTTCGTTTGGAATTGCTGTGGCGGCTACAATTTGCACGGTGTTATTGGGAAGCCA
TAGCCACCAGCAAGGGGGAGCCAATAAGCAGCATCAGAAGAACCAAATCTGCCCTTGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTCAACGATTGGGAACTCCTCGATTGCCATGAAGATGGCGAGAAAAAACTCAGCTCTGCCAAACTCGGTGTCGATCAGAAGATGGCTTTCGAGTTAAACGATAC
TGATCGATCTATTTCCGTTTCAGATCAACAAAACACGATCACTGGCAGAGCGGCTTGCGATATACAACAAATCAGTGTGCAAGATGATGAAGACATCGTTTCACAAGTTT
CCGGCCAGAAACTGATCGGCGACATGAAAAAGGACTCCGCTAGGTTTTGTACCGGCGCAGAATCAGATGTGCACGATGACGCAGAAGTCAAGGAGGAGGGCGTAAATTCA
AGAAGAATGAAAATGGCGATGGAGAAGAGACAAAAATGGGGGAGAGCGGCCATTTGTTCGTTTGGAATTGCTGTGGCGGCTACAATTTGCACGGTGTTATTGGGAAGCCA
TAGCCACCAGCAAGGGGGAGCCAATAAGCAGCATCAGAAGAACCAAATCTGCCCTTGTGAATAA
Protein sequenceShow/hide protein sequence
MVLNDWELLDCHEDGEKKLSSAKLGVDQKMAFELNDTDRSISVSDQQNTITGRAACDIQQISVQDDEDIVSQVSGQKLIGDMKKDSARFCTGAESDVHDDAEVKEEGVNS
RRMKMAMEKRQKWGRAAICSFGIAVAATICTVLLGSHSHQQGGANKQHQKNQICPCE