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Tan0001577 (gene) of Snake gourd v1 genome

Gene IDTan0001577
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:6182214..6185963
RNA-Seq ExpressionTan0001577
SyntenyTan0001577
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593213.1 hypothetical protein SDJN03_12689, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1870.51Show/hide
Query:  MAAFRQREE-FYYFVEQRTKTSRPPQRVAYDGELHHLPRSKNNFDHHLFLEYAAAAATAGVGEVRGTIDSKEAAERYG
        MAAFR+REE +YYFVEQRTK SRP Q+V  DGELHHLPR  NNFDH LF +Y A +    VGEVR TIDSKEAAE  G
Subjt:  MAAFRQREE-FYYFVEQRTKTSRPPQRVAYDGELHHLPRSKNNFDHHLFLEYAAAAATAGVGEVRGTIDSKEAAERYG
TrEMBL top hitse value%identityAlignment
A0A0A0K673 Uncharacterized protein2.8e-1446.85Show/hide
Query:  MAAFRQREEFYYFVEQRTK--TSRPPQ-------RVAYDGELHHLPRSKNNFDHHLFLEYAA-AAATAGVGEVRGTIDSKEAAERYGGISIIDYWITKKP
        MAAF ++EE++YF  +RT+  TSR PQ       +  Y+GE+ HL RSKNN DH L  E +  +AA   V E + TI+SK+AA+ YGGI+I+D+W TKKP
Subjt:  MAAFRQREEFYYFVEQRTK--TSRPPQ-------RVAYDGELHHLPRSKNNFDHHLFLEYAA-AAATAGVGEVRGTIDSKEAAERYGGISIIDYWITKKP

Query:  AAAAAASFRFH
        A       R +
Subjt:  AAAAAASFRFH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTTCCGGCAGCGGGAGGAGTTCTACTACTTCGTCGAGCAAAGAACCAAAACTTCCCGACCACCCCAAAGGGTCGCCTACGACGGCGAGCTTCACCACCTCCC
TCGGTCTAAGAACAACTTTGATCATCATCTGTTCTTGGAATATGCGGCGGCGGCTGCGACGGCCGGTGTCGGAGAAGTTAGGGGTACCATTGATAGCAAAGAGGCCGCTG
AGAGGTACGGCGGAATTTCCATCATCGATTACTGGATCACGAAGAAACCTGCGGCGGCGGCGGCGGCATCTTTCCGATTTCACAAGTAG
mRNA sequenceShow/hide mRNA sequence
GAGAAATTAGAGAAGAAAAACAGTGGGGTCCGATCGGCGGTAGAGCCCCACATGTTCTCCACTATAAAAGGAACCCCAAAATCCTTCACCCTCTTCATAACACACACAAA
AACAAAACACAACTTCAATTGCAACTTCGCCGGAATCTATGGCAGCTTTCCGGCAGCGGGAGGAGTTCTACTACTTCGTCGAGCAAAGAACCAAAACTTCCCGACCACCC
CAAAGGGTCGCCTACGACGGCGAGCTTCACCACCTCCCTCGGTCTAAGAACAACTTTGATCATCATCTGTTCTTGGAATATGCGGCGGCGGCTGCGACGGCCGGTGTCGG
AGAAGTTAGGGGTACCATTGATAGCAAAGAGGCCGCTGAGAGGTACGGCGGAATTTCCATCATCGATTACTGGATCACGAAGAAACCTGCGGCGGCGGCGGCGGCATCTT
TCCGATTTCACAAGTAGAGGTCTGGAAATTCGTCCGACGATGGTGTTTCTACCATTGCCGGGGTTTCGCCAGAAAGTCGCCACACCACCGTCAAAAAGTCGTCGGACCAC
CGCCAGATCTCCGAAAGGGAATAAGGTTTAGAGAAATTGGTGGAGAGGTGTGTGAATTGATTTTGTGGGGAGATGTAAGTTGAGAAAATTGGGGGAGATATTTGGGGAAG
TGGGGAGTTGAGAACTCAATCCAACTTAATGACCCAAACGCTGAGTTGGTTTTTTAAACCAACTCAACCCAACTCATACCAATGAGCCAAACAACCCATTAAAAGAAAGG
AACTTAGAGAAATTCATAAGTATGGAGAAAATGTTGAAAGATAGAAAATACTTTTGCGATCTGGTCAAACAAAATGCGTTTTTACGTTAATACTTCAAAATTAGTATTAT
CCAAAAAAATCTAAGTTCATGTTTGATAACCATTTTGTTTTTAGTTTTCGATTTTTAAAAATTGTACTTACTTTCTCACCATTTCTCCATAATGATTTTATCTTCCCTAC
AATAGCTC
Protein sequenceShow/hide protein sequence
MAAFRQREEFYYFVEQRTKTSRPPQRVAYDGELHHLPRSKNNFDHHLFLEYAAAAATAGVGEVRGTIDSKEAAERYGGISIIDYWITKKPAAAAAASFRFHK