; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001580 (gene) of Snake gourd v1 genome

Gene IDTan0001580
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationLG08:16575368..16576588
RNA-Seq ExpressionTan0001580
SyntenyTan0001580
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]2.7e-3828.06Show/hide
Query:  MVSPEL-AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQ
        ++ P L +++ V  L+  +  WD + I R F + D   I QIP       D+++W +   G +TVKS Y+  L  R    A  S+SE  KN W  +WS+ 
Subjt:  MVSPEL-AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQ

Query:  IPHKIKICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANK----GELDV
        +P KI+I  W   ++ LP+ +NL +R +  +P C +CK   E+  H    CK  +K WRL L       + N     P       + G  +     ++D+
Subjt:  IPHKIKICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANK----GELDV

Query:  FMIILWKIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGH
        F  +LW  W+ RN  +      N        +  +  + +V  S +++  LG      W PP  G+  + TD++ N      G+G ++R+  G+V     
Subjt:  FMIILWKIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGH

Query:  QFIRDQGSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA
        +  +  GS+   E   +  G++  K+  V  +++ESDS EV+ L+  +    +E  ++   I  L+E + H++  + HRS N  AH+LA+ A
Subjt:  QFIRDQGSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_023905045.1 uncharacterized protein LOC112016795 [Quercus suber]6.7e-3727.98Show/hide
Query:  STVRSLLKE-DGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGL---QQRLAQEASSSNSEGVKNFWKSLWSVQIPHKI
        +TV  L+ E  GEW+VD ++  F  DD   IL IPR    N D+++W Y P+G FTV SAY++ L   Q +  +E S ++S     FW+ +WS++IP+K+
Subjt:  STVRSLLKE-DGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGL---QQRLAQEASSSNSEGVKNFWKSLWSVQIPHKI

Query:  KICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLF-LPSNGDIFYVNRYSWGPADYFGWTMDGANKGE--LDVFMIILW
        K  +W   ++ LPTK NL  RG+  DP C  C    E++ HLFW C+   + W    +P +    +   +     D   + +   + G+  L++ + I W
Subjt:  KICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLF-LPSNGDIFYVNRYSWGPADYFGWTMDGANKGE--LDVFMIILW

Query:  KIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQ
         +W  RN +   + G+     + I   A +       +          + + W+PP+  W+ + TD++    + + GIG ++R+  G VI A  Q +   
Subjt:  KIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQ

Query:  GSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA
           L  E   +   +    +  V  +++E+DS  +   + G  +      ++ + I      + H+  +H+ R  NK AH LAQ A
Subjt:  GSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.7e-3827.94Show/hide
Query:  STVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICS
        S V  L+K D +WD  K+R+ F + D   IL+IP       D+++W Y+ RG ++VKS Y+L L+ +     S+S +E    +W +LW++++P K+KI  
Subjt:  STVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICS

Query:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGA---NKGELDVFMIILWKIWD
        W    + LP+ +NL +R +  +P C  CK   E+  H    CK  RK W L  P     F   R      D F    + A    K +L++ + + W  W 
Subjt:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGA---NKGELDVFMIILWKIWD

Query:  FRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLG-QVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSI
         RN  +      N    +   +  ++ F +V   Q+   S+  +    +W+PP +  + +  D++ N    + G+G ++R+  G+++ AG      +GS 
Subjt:  FRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLG-QVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSI

Query:  LILELTGIIKGMRSIKNR-VIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA
         + E   ++ G++  +N  V  L++ESD LEV+ L+       +E  +    I +  + +  +   HI R  N  AH LA+ A
Subjt:  LILELTGIIKGMRSIKNR-VIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]3.9e-3727.46Show/hide
Query:  AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKI
        +++ V  L+  +  WD + I + F + D   I QIP       D+++W +   G +TVKS Y+  L+ R    A  S+SE  KN W  +WS+ +P KI+I
Subjt:  AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKI

Query:  CSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANK----GELDVFMIILWK
          W   ++ LP+ +NL +R +  +P C +CK   E+  H    CK  +K WRL       +FY++  +  P       + G  +     ++D+F ++LW 
Subjt:  CSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANK----GELDVFMIILWK

Query:  IWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQ-VIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQ
         W+ RN  +      N        +  +  + +V  S +      Q V    W PP  G+  + TD++ N      G+G ++R+  G+V     +  +  
Subjt:  IWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQ-VIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQ

Query:  GSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA
        GS+   E   +  G++  K+  V  +++ESDS EV+ L+  +    +E  ++   I  L+E + H++  + HRS N  AH+L + A
Subjt:  GSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_030495196.1 uncharacterized protein LOC115710989 [Cannabis sativa]3.3e-3627.58Show/hide
Query:  STVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICS
        + V +L+ ED +WDV  + + F   DV   L IP     +ND +VW +   GI+TV+S Y L     LA++  SS+S     +WKS WS+Q+P KIKI +
Subjt:  STVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICS

Query:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRN
        W +I   LP   +L++R +  D  C +C++  ES  H+F+GC   +  WRL   S     +    S    DY  +      K E +  +  LW IW  RN
Subjt:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRN

Query:  DIVNSQGGTNWFKWSTITQMAISEFTQVS------TSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQG
         +V+S+   +    +  +   +  +           +  ++ S      + W PP  G   L  D++ +      G+G ++RN  G+VI A    I    
Subjt:  DIVNSQGGTNWFKWSTITQMAISEFTQVS------TSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQG

Query:  SILILELTGIIKGMRSIKNRVIPL-MVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRL
        +   +E   +  G+  +  + + + +VE+D+L V   ++         S L   I +L   + +    H+ R+ N  A +LA+ A  L
Subjt:  SILILELTGIIKGMRSIKNRVIPL-MVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRL

TrEMBL top hitse value%identityAlignment
A0A2H5Q972 Uncharacterized protein (Fragment)1.3e-3828.06Show/hide
Query:  MVSPEL-AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQ
        ++ P L +++ V  L+  +  WD + I R F + D   I QIP       D+++W +   G +TVKS Y+  L  R    A  S+SE  KN W  +WS+ 
Subjt:  MVSPEL-AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQ

Query:  IPHKIKICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANK----GELDV
        +P KI+I  W   ++ LP+ +NL +R +  +P C +CK   E+  H    CK  +K WRL L       + N     P       + G  +     ++D+
Subjt:  IPHKIKICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANK----GELDV

Query:  FMIILWKIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGH
        F  +LW  W+ RN  +      N        +  +  + +V  S +++  LG      W PP  G+  + TD++ N      G+G ++R+  G+V     
Subjt:  FMIILWKIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGH

Query:  QFIRDQGSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA
        +  +  GS+   E   +  G++  K+  V  +++ESDS EV+ L+  +    +E  ++   I  L+E + H++  + HRS N  AH+LA+ A
Subjt:  QFIRDQGSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRA

A0A803P623 Uncharacterized protein1.6e-3627.58Show/hide
Query:  STVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICS
        + V +L+ ED +WDV  + + F   DV   L IP     +ND +VW +   GI+TV+S Y L     LA++  SS+S     +WKS WS+Q+P KIKI +
Subjt:  STVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICS

Query:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRN
        W +I   LP   +L++R +  D  C +C++  ES  H+F+GC   +  WRL   S     +    S    DY  +      K E +  +  LW IW  RN
Subjt:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRN

Query:  DIVNSQGGTNWFKWSTITQMAISEFTQVS------TSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQG
         +V+S+   +    +  +   +  +           +  ++ S      + W PP  G   L  D++ +      G+G ++RN  G+VI A    I    
Subjt:  DIVNSQGGTNWFKWSTITQMAISEFTQVS------TSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQG

Query:  SILILELTGIIKGMRSIKNRVIPL-MVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRL
        +   +E   +  G+  +  + + + +VE+D+L V   ++         S L   I +L   + +    H+ R+ N  A +LA+ A  L
Subjt:  SILILELTGIIKGMRSIKNRVIPL-MVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRL

A0A803PV88 Uncharacterized protein2.1e-3630.1Show/hide
Query:  TVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICSW
        TV   +   G W+ DK+   F    V +IL++P  G+H +D +VWK++P G+FTVKSAY L     L    SSSN     ++WK+ W++ +P K+K  SW
Subjt:  TVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICSW

Query:  IIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRND
         +    LP   NL RR     P C  CK   E+  H    C    K W+    S    FY++       ++     D  NK  L + + I+W IW+ RN 
Subjt:  IIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRND

Query:  IV---NSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSD---WIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGS
         +   +    T+   W   T   IS++ +  ++    +S   +  +D    +P N   + L TD++ +      GIG +V++ +G V+   +  I   G+
Subjt:  IV---NSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSD---WIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGS

Query:  I--LILELTGIIKGMRSIKNRVIPL-MVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWS---HITFRHIHRSTNKEAHNLAQRATRL
        +   + E   +  G+   ++  IPL +VE+DS    LL++  L    + S L DI+  +R   S   ++  RH  R  N +AHNLA+RA  L
Subjt:  I--LILELTGIIKGMRSIKNRVIPL-MVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWS---HITFRHIHRSTNKEAHNLAQRATRL

A0A803QEG9 Uncharacterized protein1.6e-3626.38Show/hide
Query:  VRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICSWI
        V +L+ ++ +W++  +++ F   D+  IL +P       DK++W ++  G FTV+SAY L     L  E  SS+S     +WK  WS+QIP K+KI +W 
Subjt:  VRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICSWI

Query:  IIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRNDI
        +I   LP   +L+RR +  D  C +CK+  EST H  +GCK  +  WR F   + +  +    S    DY  +     NK E++    I+W IW  RN +
Subjt:  IIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRNDI

Query:  VNSQGGTNWFKWSTITQMAISEF----------------TQVS--TSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVIC
        V+ +        +    + +  F                T V+  + Q           S W PP    + L TD++  ++    G+G ++R+  G V  
Subjt:  VNSQGGTNWFKWSTITQMAISEF----------------TQVS--TSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVIC

Query:  AGHQFIRDQGSILILELTGIIKGMRSIKNRVIPLM-VESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRL
        A    I        +E   +   +     + +P+  +E+D+L V+  ++      +E S L   +  L   + +++  H++R+ N  AH LA+ A  L
Subjt:  AGHQFIRDQGSILILELTGIIKGMRSIKNRVIPLM-VESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRL

A0A803QPB7 Uncharacterized protein5.0e-3828.5Show/hide
Query:  AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKI
        A+ T+ SLL+ DG W  +++R  F  DD+  +L I +  I+ +D I W  +P GI++V S Y+L  Q      A  SN   +K++WK +W   +  KIK 
Subjt:  AQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKI

Query:  CSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDF
          W +    +PTK  L +RG+ ID  C +C    E  CH  W C   +  W+LF    G    +       AD   W  +   K E   FM + W +W  
Subjt:  CSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDF

Query:  RNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSILI
        RN+ V      +   W++     I  FT +   Q+  ++    + S WIPP + ++ + TD+S     +  G+  ++R+ +G ++ A   FI    S+L+
Subjt:  RNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSILI

Query:  LELTGIIKGMR-SIKNRVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQ
         E   +  G++ +I+  +    V SD+  +I  +       T+   L   I  LR ++  + F    RS N+ A++LA+
Subjt:  LELTGIIKGMR-SIKNRVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.5e-0628.92Show/hide
Query:  ITQMAISEFTQVST-SQEELQSLGQVIPSD----WIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSILILELTGIIKGMRSI
        + Q    E+T+ +T +Q   +S G V   D    W  P RGW     D S  +       GW+VR+  G  + AG    R   + L  E+  +I  M+  
Subjt:  ITQMAISEFTQVST-SQEELQSLGQVIPSD----WIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSILILELTGIIKGMRSI

Query:  -KNRVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQ
          +    +  E D+  +  LI G  V +   +++RDI W LR ++  I F  I R  N  A  LA+
Subjt:  -KNRVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQ

AT3G09510.1 Ribonuclease H-like superfamily protein1.1e-2425.26Show/hide
Query:  QSTVRSLLKEDGE---WDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKI
        + T+ +L +  G    WD  KI +   + D G I +I        DKI+W YN  G +TV+S Y L          + +   G  +    +W++ I  K+
Subjt:  QSTVRSLLKEDGE---WDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKI

Query:  KICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPS-NGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMI-ILWK
        K   W  +   L T + L  RG+ IDP CP C +  ES  H  + C      WRL   S   +    N +    ++   +  D        +  + ++W+
Subjt:  KICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPS-NGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMI-ILWK

Query:  IWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPS---DWIPPNRGWWSLYTDSSRN-DAMEAGGIGWIVRNCEGEVICAGHQFI
        IW  RN++V ++   +  K     +    ++   + S ++  S  + I     +W  P   +     D+  +   +EA G GWI+RN  G  I  G   +
Subjt:  IWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPS---DWIPPNRGWWSLYTDSSRN-DAMEAGGIGWIVRNCEGEVICAGHQFI

Query:  RDQGSILILELTGIIKGMRSIKNR-VIPLMVESDSLEVILLIEGKLVDYTEASYLRDI-IWHLREEWSHITFRHIHRSTNKEAHNLAQ
            + L  E   ++  ++    R    + +E D   +I LI G     + A++L DI  W    +++ I F  I R  NK AH LA+
Subjt:  RDQGSILILELTGIIKGMRSIKNR-VIPLMVESDSLEVILLIEGKLVDYTEASYLRDI-IWHLREEWSHITFRHIHRSTNKEAHNLAQ

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.0e-0628.79Show/hide
Query:  NFWKSLWSVQIPHKIKICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRK
        N+   +WS++I  KIK+  W  + + LP    L+ R + I+P+C  C+ + E+  H+ + C   ++
Subjt:  NFWKSLWSVQIPHKIKICSWIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRK

AT4G29090.1 Ribonuclease H-like superfamily protein8.5e-2226.08Show/hide
Query:  VRSLLKEDG-EWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKN-FWKSLWSVQIPHKIKICS
        V  L+ E G EW  D I   F E +   I ++   G    D   W Y   G +TVKS Y +  Q    + +    SE   N  ++ +W  Q   KI+   
Subjt:  VRSLLKEDG-EWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKN-FWKSLWSVQIPHKIKICS

Query:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLF---LPSNG---DIFYVNRYSWGPADYFGWTMDGAN-----KGELDVFM
        W  + + LP    L  R L  +  C  C    E+  HL + C   R  W +    +P  G   D  YVN Y         W  +  N     +    +  
Subjt:  WIIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLF---LPSNG---DIFYVNRYSWGPADYFGWTMDGAN-----KGELDVFM

Query:  IILWKIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSD---WIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAG
         +LW++W  RN++V      N  +     +  + E+ ++ T  E   +  QV  S    W PP   W    TD++ N   E  GIGW++RN +GEV   G
Subjt:  IILWKIWDFRNDIVNSQGGTNWFKWSTITQMAISEFTQVSTSQEELQSLGQVIPSD---WIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAG

Query:  HQFIRDQGSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATR
         + +    S+L  EL  +   + S+   +   ++ ESDS  +I ++    +  +    ++D +  L  +++ + F  I R    E + LA+R  R
Subjt:  HQFIRDQGSILILELTGIIKGMRSIKN-RVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.5e-0624.87Show/hide
Query:  ILWKIWDFRNDIVNSQGGTNWFKWSTITQMAIS---EFTQVSTSQEELQSLGQVIPS---DWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVIC
        ++W+IW   ND+V +   T   K+ T  +MA++   E+   + + E+        PS    W PP R       D+S ++     G+GWI+RN +G VI 
Subjt:  ILWKIWDFRNDIVNSQGGTNWFKWSTITQMAIS---EFTQVSTSQEELQSLGQVIPS---DWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVIC

Query:  AGHQFIRDQGSILILELTGIIKGMR-SIKNRVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATR
         G    + + +    E + +I  ++ S       ++ E D+  +  +I  K  +     +  D I      +  I F   HR  N  A  LA++A +
Subjt:  AGHQFIRDQGSILILELTGIIKGMR-SIKNRVIPLMVESDSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTCCCGAACTGGCTCAAAGCACGGTTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATTCGAAGGTGTTTCCAGGAAGATGATGTTGGTAA
TATCCTCCAAATCCCACGTTACGGGATACATAATAATGACAAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGCTTATCGCCTCGGCCTCCAAC
AAAGACTAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAAGAACTTTTGGAAGTCATTATGGAGTGTTCAGATCCCACACAAAATTAAAATTTGTTCATGGATA
ATCATTCAGAGTTGCTTACCAACGAAAGACAACTTAATTCGTCGGGGTTTGGAAATCGACCCATGGTGTCCGATGTGCAAGAAGTACCCAGAATCAACTTGTCATCTTTT
TTGGGGATGTAAGGTAACTCGAAAGTTTTGGCGTCTTTTCCTCCCTTCTAACGGAGATATTTTTTATGTCAACAGATACTCCTGGGGCCCTGCTGACTACTTTGGATGGA
CTATGGATGGTGCAAACAAAGGGGAGCTCGATGTTTTTATGATTATACTGTGGAAAATATGGGACTTTCGGAACGACATTGTGAATAGCCAAGGAGGGACGAACTGGTTT
AAGTGGAGTACAATTACTCAAATGGCAATTAGTGAATTTACTCAGGTCTCCACTAGCCAGGAGGAATTGCAGAGTCTAGGCCAAGTCATTCCTTCTGATTGGATTCCCCC
AAACAGGGGTTGGTGGAGCCTCTATACAGATTCCTCTAGGAATGATGCAATGGAAGCGGGCGGTATTGGCTGGATAGTTCGAAATTGTGAGGGTGAGGTGATCTGTGCGG
GTCATCAATTCATCAGAGATCAAGGGTCTATTCTAATTTTGGAGTTGACGGGAATCATAAAGGGAATGAGATCTATCAAGAATAGAGTAATTCCTCTAATGGTGGAATCA
GACTCTCTAGAGGTAATATTACTAATTGAAGGTAAGCTTGTTGATTACACAGAGGCAAGTTACTTAAGAGACATCATCTGGCATCTGCGAGAGGAATGGTCACATATTAC
TTTCAGACATATTCACCGATCGACGAATAAGGAAGCTCACAATTTAGCTCAAAGGGCAACACGTTTGCGTTCTGATGACTTTGGGTTTGAGGAGTCAGCCAGGCTCCGCG
TTATTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTCCCGAACTGGCTCAAAGCACGGTTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATTCGAAGGTGTTTCCAGGAAGATGATGTTGGTAA
TATCCTCCAAATCCCACGTTACGGGATACATAATAATGACAAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGCTTATCGCCTCGGCCTCCAAC
AAAGACTAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAAGAACTTTTGGAAGTCATTATGGAGTGTTCAGATCCCACACAAAATTAAAATTTGTTCATGGATA
ATCATTCAGAGTTGCTTACCAACGAAAGACAACTTAATTCGTCGGGGTTTGGAAATCGACCCATGGTGTCCGATGTGCAAGAAGTACCCAGAATCAACTTGTCATCTTTT
TTGGGGATGTAAGGTAACTCGAAAGTTTTGGCGTCTTTTCCTCCCTTCTAACGGAGATATTTTTTATGTCAACAGATACTCCTGGGGCCCTGCTGACTACTTTGGATGGA
CTATGGATGGTGCAAACAAAGGGGAGCTCGATGTTTTTATGATTATACTGTGGAAAATATGGGACTTTCGGAACGACATTGTGAATAGCCAAGGAGGGACGAACTGGTTT
AAGTGGAGTACAATTACTCAAATGGCAATTAGTGAATTTACTCAGGTCTCCACTAGCCAGGAGGAATTGCAGAGTCTAGGCCAAGTCATTCCTTCTGATTGGATTCCCCC
AAACAGGGGTTGGTGGAGCCTCTATACAGATTCCTCTAGGAATGATGCAATGGAAGCGGGCGGTATTGGCTGGATAGTTCGAAATTGTGAGGGTGAGGTGATCTGTGCGG
GTCATCAATTCATCAGAGATCAAGGGTCTATTCTAATTTTGGAGTTGACGGGAATCATAAAGGGAATGAGATCTATCAAGAATAGAGTAATTCCTCTAATGGTGGAATCA
GACTCTCTAGAGGTAATATTACTAATTGAAGGTAAGCTTGTTGATTACACAGAGGCAAGTTACTTAAGAGACATCATCTGGCATCTGCGAGAGGAATGGTCACATATTAC
TTTCAGACATATTCACCGATCGACGAATAAGGAAGCTCACAATTTAGCTCAAAGGGCAACACGTTTGCGTTCTGATGACTTTGGGTTTGAGGAGTCAGCCAGGCTCCGCG
TTATTAGCTAA
Protein sequenceShow/hide protein sequence
MVSPELAQSTVRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDKIVWKYNPRGIFTVKSAYRLGLQQRLAQEASSSNSEGVKNFWKSLWSVQIPHKIKICSWI
IIQSCLPTKDNLIRRGLEIDPWCPMCKKYPESTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMDGANKGELDVFMIILWKIWDFRNDIVNSQGGTNWF
KWSTITQMAISEFTQVSTSQEELQSLGQVIPSDWIPPNRGWWSLYTDSSRNDAMEAGGIGWIVRNCEGEVICAGHQFIRDQGSILILELTGIIKGMRSIKNRVIPLMVES
DSLEVILLIEGKLVDYTEASYLRDIIWHLREEWSHITFRHIHRSTNKEAHNLAQRATRLRSDDFGFEESARLRVIS