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Tan0001617 (gene) of Snake gourd v1 genome

Gene IDTan0001617
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationLG05:12068543..12068984
RNA-Seq ExpressionTan0001617
SyntenyTan0001617
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605034.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4288.66Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL +MVNAMQNLRLSSLT HHGSSAIRKG+CAVYVG+SQKKRF+IPVAYLNEPFFKDLL QVEEEFGY+HPMGGLTIPCSD TFI +ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

KGN61865.1 hypothetical protein Csa_006212 [Cucumis sativus]2.2e-4287.63Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL RMVN MQN+RLSSLT HHGSSAIRKG+CAVYVGE+QKKRFVIP+AYLNEPFFKDLL QV EEFGYNHPMGGLTIPCS+DTF+D+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

XP_008457943.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]5.7e-4388.66Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL RMVNA+QN+RLSSLT HHGSSAIRKG+CAVYVGESQKKRFVIP+AYLN+PFFKDLL QV EEFGYNHPMGGLTIPCSDDTF+D+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

XP_022146118.1 auxin-responsive protein SAUR24-like [Momordica charantia]7.7e-4082.47Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL R+VNA+Q+L+LSSLT +HGSS +R+G+CAVYVGESQKKRFVIPVAYLNEP F+DLL Q EEE+GYNHPMGGLTIPCSDDTFID+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

XP_038902470.1 auxin-induced protein 15A-like [Benincasa hispida]1.8e-4491.75Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL RMVNA+QN+RLSSLT HHGSSAIRKG+CAVYVGESQKKRFVIPVAYLNEPFFKDLL QVEEEFGYNHPMGGLTIPCSDDTF+D+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

TrEMBL top hitse value%identityAlignment
A0A0A0LIY4 SAUR family protein1.0e-4287.63Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL RMVN MQN+RLSSLT HHGSSAIRKG+CAVYVGE+QKKRFVIP+AYLNEPFFKDLL QV EEFGYNHPMGGLTIPCS+DTF+D+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

A0A1S3C683 auxin-responsive protein SAUR21-like2.8e-4388.66Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL RMVNA+QN+RLSSLT HHGSSAIRKG+CAVYVGESQKKRFVIP+AYLN+PFFKDLL QV EEFGYNHPMGGLTIPCSDDTF+D+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

A0A5D3BN78 Auxin-responsive protein SAUR21-like2.8e-4388.66Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL RMVNA+QN+RLSSLT HHGSSAIRKG+CAVYVGESQKKRFVIP+AYLN+PFFKDLL QV EEFGYNHPMGGLTIPCSDDTF+D+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

A0A6J1CXQ4 auxin-responsive protein SAUR24-like3.7e-4082.47Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES
        MGFRL R+VNA+Q+L+LSSLT +HGSS +R+G+CAVYVGESQKKRFVIPVAYLNEP F+DLL Q EEE+GYNHPMGGLTIPCSDDTFID+ISRLNES
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES

A0A6J1CYP6 auxin-responsive protein SAUR21-like4.7e-3575Show/hide
Query:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNE
        MGFRL ++VNA+QNL LSSLT  HGSS IRKG  A+YVGES++ RFVIP+AYL+ P+FKDLL Q EEEFGY+HPMGGLTIPC+DDTFID++SRLNE
Subjt:  MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNE

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR235.8e-2266.67Show/hide
Query:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLN
        SA  KGF AVYVGESQKKR+++P++YLN+P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SRL+
Subjt:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLN

Q9FJF7 Auxin-responsive protein SAUR229.8e-2266.18Show/hide
Query:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL
        SA  KGF AVYVGESQKKR+++P++YLN+P F+ LL + E+EFG++HPMGGLTIPC +DTFI++ SRL
Subjt:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL

Q9FJF9 Auxin-responsive protein SAUR211.3e-2165.22Show/hide
Query:  SSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL
        +SA  KGF AVYVGESQKKR+++P++YL++P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SRL
Subjt:  SSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL

Q9FJG0 Auxin-responsive protein SAUR205.8e-2266.18Show/hide
Query:  SSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISR
        +SA  KGF AVYVGESQKKR+++P++YLN+P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SR
Subjt:  SSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISR

Q9FK62 Auxin-responsive protein SAUR242.0e-2269.12Show/hide
Query:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL
        SA  KGF AVYVGESQKKR+++PV+YLN+P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SRL
Subjt:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family1.4e-2352.53Show/hide
Query:  MGFRLTRMV-NAMQNLRLSSLTAHHGSSA---IRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLN
        M  R+ R++ ++ Q LR + L +   SS+   + KG+ AVYVGE   KRFV+PV+YL++P F+DLL + EEEFG++HPMGGLTIPCS++ FID+ SR N
Subjt:  MGFRLTRMV-NAMQNLRLSSLTAHHGSSA---IRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLN

AT5G18020.1 SAUR-like auxin-responsive protein family4.1e-2366.18Show/hide
Query:  SSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISR
        +SA  KGF AVYVGESQKKR+++P++YLN+P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SR
Subjt:  SSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISR

AT5G18050.1 SAUR-like auxin-responsive protein family7.0e-2366.18Show/hide
Query:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL
        SA  KGF AVYVGESQKKR+++P++YLN+P F+ LL + E+EFG++HPMGGLTIPC +DTFI++ SRL
Subjt:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL

AT5G18060.1 SAUR-like auxin-responsive protein family4.1e-2366.67Show/hide
Query:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLN
        SA  KGF AVYVGESQKKR+++P++YLN+P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SRL+
Subjt:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLN

AT5G18080.1 SAUR-like auxin-responsive protein family1.4e-2369.12Show/hide
Query:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL
        SA  KGF AVYVGESQKKR+++PV+YLN+P F+ LL + EEEFG++HPMGGLTIPC +DTFI++ SRL
Subjt:  SAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCGTTTGACAAGAATGGTAAATGCTATGCAAAATCTTAGACTTTCTTCTCTAACAGCGCACCATGGATCTTCGGCAATCCGCAAAGGTTTTTGTGCAGTTTA
TGTGGGAGAAAGCCAAAAGAAGCGGTTTGTGATTCCAGTAGCTTACTTGAACGAGCCATTTTTCAAGGACTTGCTAATTCAAGTTGAAGAAGAATTTGGTTATAATCATC
CTATGGGAGGCCTCACTATTCCTTGCAGCGATGATACATTCATTGATATCATCTCTCGTTTGAATGAGTCATGA
mRNA sequenceShow/hide mRNA sequence
CTTAATTATTTTCAATTCCCAAACAACTCAAATCTCAAACTTCCAACTCACCACCAGGTTCTCTCTCTCTCAGGTGCTATTCTGCAACTTCTAGATTCTAAAATTCAAGA
CTCTTCCAACTTCTTCTTGAGAGAGAGAGAGAAAAATCATGGGTTTCCGTTTGACAAGAATGGTAAATGCTATGCAAAATCTTAGACTTTCTTCTCTAACAGCGCACCAT
GGATCTTCGGCAATCCGCAAAGGTTTTTGTGCAGTTTATGTGGGAGAAAGCCAAAAGAAGCGGTTTGTGATTCCAGTAGCTTACTTGAACGAGCCATTTTTCAAGGACTT
GCTAATTCAAGTTGAAGAAGAATTTGGTTATAATCATCCTATGGGAGGCCTCACTATTCCTTGCAGCGATGATACATTCATTGATATCATCTCTCGTTTGAATGAGTCAT
GA
Protein sequenceShow/hide protein sequence
MGFRLTRMVNAMQNLRLSSLTAHHGSSAIRKGFCAVYVGESQKKRFVIPVAYLNEPFFKDLLIQVEEEFGYNHPMGGLTIPCSDDTFIDIISRLNES