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Tan0001630 (gene) of Snake gourd v1 genome

Gene IDTan0001630
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationLG01:23939280..23940166
RNA-Seq ExpressionTan0001630
SyntenyTan0001630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596882.1 hypothetical protein SDJN03_10062, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1256.67Show/hide
Query:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAAPPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGPI-MADSPPSPP
        MA ARAMLVLAL F ALSSSAIAQ PSPA   +AAAP  S P     PA  PPAASPP  IS+PPMAA          SPP M MSP  + M DSPPS P
Subjt:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAAPPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGPI-MADSPPSPP

Query:  GPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYKAGLAAVLGGLAVVL
         P PG                     GFSI HGGYKAGLAAVLGG+A VL
Subjt:  GPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYKAGLAAVLGGLAVVL
XP_022923372.1 classical arabinogalactan protein 9-like [Cucurbita moschata]8.5e-3070.19Show/hide
Query:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA------PPVSVPPTTPPP-ATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP---I
        MA ARAMLVLALS L+L++SAIAQ+PSPAP P+ AA      PPV+ PPTTPPP A PP AASPPPS+STPPMAA PP++PP M+SPP M   P P    
Subjt:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA------PPVSVPPTTPPP-ATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP---I

Query:  MADSPPSPPGPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYK-AGLAAVLGGLAVVLV
        M DSPPSPPGPSPGP P   P  APSPPP PP G GFSIQHGGYK AG+AAVLGGLA+VLV
Subjt:  MADSPPSPPGPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYK-AGLAAVLGGLAVVLV
XP_023553563.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]8.0e-2869.75Show/hide
Query:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA------PPVSVPPTTPPP-ATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP---I
        MA ARAMLVLALS L+L++SAIAQ+PSPAP P+ AA      PPV+ PPTTPPP A PP AASPPPS+STPPMAAPP  +PP M+SPP M   P P    
Subjt:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA------PPVSVPPTTPPP-ATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP---I

Query:  MADSPPSPPGPSPGPEPMTPPGPAPSPPP-PPPRGGGFSIQHGGYK-AGLAAVLGGLAVVLV
        M DSPPSPPGPSPGP     P  APSPPP PPP G GFSIQHGGYK AG+AAVLGGLA+VLV
Subjt:  MADSPPSPPGPSPGPEPMTPPGPAPSPPP-PPPRGGGFSIQHGGYK-AGLAAVLGGLAVVLV
XP_038903480.1 classical arabinogalactan protein 9-like [Benincasa hispida]5.5e-2972.26Show/hide
Query:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA--PPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP-IMADSPPS
        MA+ARAMLVLALS LAL SS+IAQ+PSPAP P++AA  PP S PP   PP TPPPAASPPP+ISTPP AA PP+IPPMM+SPP M  SPGP  M DSPPS
Subjt:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA--PPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP-IMADSPPS

Query:  PPGPSPGPEPMTP--PGPAPSPPPPPPRGGGFSIQHGGYKAGLAAVLGGLAVVLV
        PPGPSP P  M+P  P PAPSPP PPP   GFSI  GGYKA  AAVLGGLAV LV
Subjt:  PPGPSPGPEPMTP--PGPAPSPPPPPPRGGGFSIQHGGYKAGLAAVLGGLAVVLV
TrEMBL top hitse value%identityAlignment
A0A0A0L458 Uncharacterized protein6.8e-2565.62Show/hide
Query:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPS--AAAPPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPM----AMSPGPIMADS
        MA+ARAMLVL LS L+LSSS+IAQ+PSP+P P+  AA PP + PP  PPP TPPPAASPP SISTPP AA P + PPMM+SPPPM    A +PGP M + 
Subjt:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPS--AAAPPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPM----AMSPGPIMADS

Query:  PPSPPGPSPGPEPMTPPGPAPSPPPPP----PRGGGFSIQHGGYKAGLAAVLGGLAVVLV
        PPSPP  S    PM+PPGPAP+P P P    PR  GFSI  GGY AG+AAVLGGLAVVLV
Subjt:  PPSPPGPSPGPEPMTPPGPAPSPPPPP----PRGGGFSIQHGGYKAGLAAVLGGLAVVLV
A0A6J1E5X6 classical arabinogalactan protein 9-like4.1e-3070.19Show/hide
Query:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA------PPVSVPPTTPPP-ATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP---I
        MA ARAMLVLALS L+L++SAIAQ+PSPAP P+ AA      PPV+ PPTTPPP A PP AASPPPS+STPPMAA PP++PP M+SPP M   P P    
Subjt:  MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAA------PPVSVPPTTPPP-ATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGP---I

Query:  MADSPPSPPGPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYK-AGLAAVLGGLAVVLV
        M DSPPSPPGPSPGP P   P  APSPPP PP G GFSIQHGGYK AG+AAVLGGLA+VLV
Subjt:  MADSPPSPPGPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYK-AGLAAVLGGLAVVLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCACGTGCCATGCTCGTGCTCGCCCTCTCTTTTCTTGCTCTTTCATCCTCCGCCATTGCTCAAGCTCCCTCCCCTGCTCCTGTTCCCTCCGCCGCCGCACC
GCCGGTTTCAGTACCACCGACTACACCACCGCCCGCCACCCCCCCACCGGCAGCCTCGCCTCCACCAAGCATCTCCACTCCACCGATGGCGGCTCCTCCTCCCTCCATCC
CGCCGATGATGTCTTCTCCGCCGCCTATGGCAATGAGTCCAGGCCCAATAATGGCCGACAGCCCACCATCGCCTCCAGGCCCAAGCCCAGGCCCAGAACCAATGACGCCT
CCGGGCCCAGCTCCATCCCCGCCACCGCCCCCACCGCGGGGAGGGGGATTTTCCATCCAGCACGGCGGCTACAAGGCGGGTCTTGCGGCGGTGTTGGGTGGCCTAGCCGT
CGTCCTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
CACCATAATAATACTAAAAAAAATCTGGTTAACATACTTTTGTGTAGGTGGAAGCGTACAATAGCAGTAGCATGGAAAAATCAATGCACTCATAAGTAAGATTAGCCCCC
CAAAAACTTCTCTCTTCTTTCCCTTTATATATATCATCCTCTCCCATCTTCTCCCTCGCTTCAATCTTCCTCTCTCTCTCTCTTTTTTTCTTCGAGCTATGGCCGCCGCA
CGTGCCATGCTCGTGCTCGCCCTCTCTTTTCTTGCTCTTTCATCCTCCGCCATTGCTCAAGCTCCCTCCCCTGCTCCTGTTCCCTCCGCCGCCGCACCGCCGGTTTCAGT
ACCACCGACTACACCACCGCCCGCCACCCCCCCACCGGCAGCCTCGCCTCCACCAAGCATCTCCACTCCACCGATGGCGGCTCCTCCTCCCTCCATCCCGCCGATGATGT
CTTCTCCGCCGCCTATGGCAATGAGTCCAGGCCCAATAATGGCCGACAGCCCACCATCGCCTCCAGGCCCAAGCCCAGGCCCAGAACCAATGACGCCTCCGGGCCCAGCT
CCATCCCCGCCACCGCCCCCACCGCGGGGAGGGGGATTTTCCATCCAGCACGGCGGCTACAAGGCGGGTCTTGCGGCGGTGTTGGGTGGCCTAGCCGTCGTCCTGGTTTA
ACAGCATAATACTTAAATTTGCTGTAGATTAATTATGAGCTCCATATCCATACTCATTTGTGTATTCTTTTTTCTTTTGTTTTTCATTTCCATCTCTTTCTTTCTCTCTG
ATCTCTTTCCCTGATGATTCTTGAGAGCAGCATGAGTGATTTGTGGGATATGTAACAGTTTATTTGTTAGCATTTTCATTTTTTTTCTAGCTGAATAAGAGAGACTTGTT
TCTTCTT
Protein sequenceShow/hide protein sequence
MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAAPPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGPIMADSPPSPPGPSPGPEPMTP
PGPAPSPPPPPPRGGGFSIQHGGYKAGLAAVLGGLAVVLV