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Tan0001649 (gene) of Snake gourd v1 genome

Gene IDTan0001649
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionABC transporter family protein
Genome locationLG04:68229633..68231462
RNA-Seq ExpressionTan0001649
SyntenyTan0001649
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577381.1 ABC transporter G family member 9, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2978.41Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +P  I WTKY+SIGTYTYKLLL+SQY+ATDTY C G G G+C+VGEFPAIKQMGLHGK +A+LA +AML+GYRLVAYIALMRIGVTKK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

XP_022929301.1 ABC transporter G family member 9 [Cucurbita moschata]4.2e-3079.55Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +P  I WTKY+SIGTYTYKLLL+SQY+ATDTY C G G G+CEVGEFPAIKQMGLHGK +A+LA +AML+GYRLVAYIALMRIGVTKK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

XP_022985044.1 ABC transporter G family member 9-like [Cucurbita maxima]1.2e-2978.41Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +P  I WTKY+SIGTYTYKLLL+SQY+ATDTY C G G G+CEVGEFPAI+QMGLHGK +A+LA +AML+GYRLVAYIALMRIGVTKK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

XP_023551984.1 ABC transporter G family member 9 isoform X1 [Cucurbita pepo subsp. pepo]5.0e-3180.68Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +PR I WTKY+SIGTYTYKLLLMSQY+ATDTY C G G G+CEVGEFPAIKQMGLHGK++A+LA +AML+GYRLVAYIALMRIGV KK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

XP_023551985.1 ABC transporter G family member 9 isoform X2 [Cucurbita pepo subsp. pepo]3.6e-2977.27Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +PR I WTKY+SIGTYTYKLLL+SQY+AT+TY CSG G G+CEVGEFPAIKQMGLHGK +A+LA +AML+GYRLV Y ALMRIGV KK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

TrEMBL top hitse value%identityAlignment
A0A6J1CMG2 ABC transporter G family member 9-like5.6e-2872.73Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKKN
        +PR I W KYLSIG +TYKLLLMSQ+EA DTYPC   GG+C+VG+FPAIKQMGL GK + VL  V ML+GYRLVAYIALMRIGVTK++
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKKN

A0A6J1CP36 ABC transporter G family member 9-like1.7e-2974.71Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +PR + WTKYLSIGTY+Y+LLLMSQ+EAT+TYPCS +GG CE+GEFPAIKQ+GL  K++ V+A V ML+GYRLVAYIALMRIGVTKK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

A0A6J1CP45 ABC transporter G family member 9-like1.6e-2772.41Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +P  I W KYLSIG +TYKLLL+SQ+EA DTYPCS  GG+C+VG+FPAIKQMGL GK + VL  V ML+GYRLVAYIALMRIGVTK+
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

A0A6J1EMR5 ABC transporter G family member 92.1e-3079.55Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +P  I WTKY+SIGTYTYKLLL+SQY+ATDTY C G G G+CEVGEFPAIKQMGLHGK +A+LA +AML+GYRLVAYIALMRIGVTKK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

A0A6J1JC66 ABC transporter G family member 9-like6.0e-3078.41Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK
        +P  I WTKY+SIGTYTYKLLL+SQY+ATDTY C G G G+CEVGEFPAI+QMGLHGK +A+LA +AML+GYRLVAYIALMRIGVTKK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSG-GLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKK

SwissProt top hitse value%identityAlignment
Q7XA72 ABC transporter G family member 214.7e-0840.24Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI
        +P  I W KY+S   Y YKLL+  QY   + Y C GSG  C V ++  IK + +   +  VLA   ML+ YR++AY+AL  +
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI

Q9C6W5 ABC transporter G family member 142.9e-1352.44Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI
        +P  I W KYLS   Y YKLLL  QY   D Y CS  G  C VG+FPAIK MGL+     V     ML+GYRL+AY+AL R+
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI

Q9LK50 ABC transporter G family member 262.6e-0633.33Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMR
        +P+ + W KYLS   Y ++LLL  QY A   + C   GG   +    +   + L+G +  +   +AM  GYRL AY  L +
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMR

Q9SZR9 ABC transporter G family member 95.1e-1852.87Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGL-CEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTK
        +P  I W KY+SIG YTYKLL++ QY A + YPC  +G L C VG+F  IK +G +  + + LA  AML+ YR++AYIAL RIG TK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGL-CEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTK

Arabidopsis top hitse value%identityAlignment
AT1G31770.1 ATP-binding cassette 142.0e-1452.44Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI
        +P  I W KYLS   Y YKLLL  QY   D Y CS  G  C VG+FPAIK MGL+     V     ML+GYRL+AY+AL R+
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI

AT3G13220.1 ABC-2 type transporter family protein1.9e-0733.33Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMR
        +P+ + W KYLS   Y ++LLL  QY A   + C   GG   +    +   + L+G +  +   +AM  GYRL AY  L +
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMR

AT3G25620.2 ABC-2 type transporter family protein3.4e-0940.24Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI
        +P  I W KY+S   Y YKLL+  QY   + Y C GSG  C V ++  IK + +   +  VLA   ML+ YR++AY+AL  +
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRI

AT4G27420.1 ABC-2 type transporter family protein3.6e-1952.87Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGL-CEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTK
        +P  I W KY+SIG YTYKLL++ QY A + YPC  +G L C VG+F  IK +G +  + + LA  AML+ YR++AYIAL RIG TK
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGL-CEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTK

AT5G06530.2 ABC-2 type transporter family protein3.3e-0432.94Show/hide
Query:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFP-AIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGV
        +P  I W +YLS   +TYKLLL  QY+                 +F  +I  M +   ++ V A V M+ GYRL+AY++L ++ +
Subjt:  LPRLIGWTKYLSIGTYTYKLLLMSQYEATDTYPCSGSGGLCEVGEFP-AIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGTTTGCTTTACAAAAAACCAATTGTCAAGTGTTGTTTTCCATTGGAGCCTTATATTCTTCCAATATGGGTGACCATGAGCGATGTACTGATGGAGCTCGTCC
ATCTCACCATTTTCATTCCCATAATTTATTGGATGACGGGCCTGAAATGCTCTGTCGCGATCATCTTCGCTACTCTATTCTCTCAACTCCTCGGTGTTTTGGTGTCCTAA
GGCTTTGGCTTGGTCTACCTCGGCTTATTGGTTGGACTAAGTACCTTTCCATTGGTACTTACACTTATAAGCTTTTGTTGATGTCTCAATATGAAGCTACTGATACCTAT
CCATGTTCGGGCAGTGGAGGGTTGTGTGAAGTTGGGGAGTTTCCTGCAATTAAGCAAATGGGTCTTCATGGAAAAGTCAGTGCTGTTCTTGCTTCGGTTGCTATGCTTAT
TGGATATCGTCTTGTTGCTTACATTGCTTTGATGAGGATTGGAGTTACCAAAAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGTTTGCTTTACAAAAAACCAATTGTCAAGTGTTGTTTTCCATTGGAGCCTTATATTCTTCCAATATGGGTGACCATGAGCGATGTACTGATGGAGCTCGTCC
ATCTCACCATTTTCATTCCCATAATTTATTGGATGACGGGCCTGAAATGCTCTGTCGCGATCATCTTCGCTACTCTATTCTCTCAACTCCTCGGTGTTTTGGTGTCCTAA
GGCTTTGGCTTGGTCTACCTCGGCTTATTGGTTGGACTAAGTACCTTTCCATTGGTACTTACACTTATAAGCTTTTGTTGATGTCTCAATATGAAGCTACTGATACCTAT
CCATGTTCGGGCAGTGGAGGGTTGTGTGAAGTTGGGGAGTTTCCTGCAATTAAGCAAATGGGTCTTCATGGAAAAGTCAGTGCTGTTCTTGCTTCGGTTGCTATGCTTAT
TGGATATCGTCTTGTTGCTTACATTGCTTTGATGAGGATTGGAGTTACCAAAAAGAACTAG
Protein sequenceShow/hide protein sequence
MLKFALQKTNCQVLFSIGALYSSNMGDHERCTDGARPSHHFHSHNLLDDGPEMLCRDHLRYSILSTPRCFGVLRLWLGLPRLIGWTKYLSIGTYTYKLLLMSQYEATDTY
PCSGSGGLCEVGEFPAIKQMGLHGKVSAVLASVAMLIGYRLVAYIALMRIGVTKKN