; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001690 (gene) of Snake gourd v1 genome

Gene IDTan0001690
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPyruvate dehydrogenase E1 component subunit beta
Genome locationLG06:19638095..19653616
RNA-Seq ExpressionTan0001690
SyntenyTan0001690
Gene Ontology termsGO:0006086 - acetyl-CoA biosynthetic process from pyruvate (biological process)
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity (molecular function)
InterPro domainsIPR027110 - Pyruvate dehydrogenase E1 component subunit beta
IPR029061 - Thiamin diphosphate-binding fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576110.1 Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3160.84Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVR+K GAGAS IL SGQ+LQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

KAG7025222.1 Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3198.72Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK
        MWGIVRQKAGA ASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK

XP_022148931.1 pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [Momordica charantia]2.0e-3262.24Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGI+RQK GAG SSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

XP_022960348.1 pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [Cucurbita moschata]9.1e-3363.64Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVRQKAGA ASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

XP_023004352.1 pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [Cucurbita maxima]9.1e-3363.64Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVRQKAGA ASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

TrEMBL top hitse value%identityAlignment
A0A6J1D6U9 Pyruvate dehydrogenase E1 component subunit beta9.9e-3362.24Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGI+RQK GAG SSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

A0A6J1GNY3 Pyruvate dehydrogenase E1 component subunit beta2.4e-3160.84Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVR+K GAGAS IL SGQ+LQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

A0A6J1H8M4 Pyruvate dehydrogenase E1 component subunit beta4.4e-3363.64Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVRQKAGA ASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

A0A6J1JUS0 Pyruvate dehydrogenase E1 component subunit beta2.4e-3160.84Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVR+K GAGAS IL SGQ+LQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

A0A6J1KQ71 Pyruvate dehydrogenase E1 component subunit beta4.4e-3363.64Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        MWGIVRQKAGA ASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+KTNYM
Subjt:  ----------------------------AIDHIINSASKTNYM

SwissProt top hitse value%identityAlignment
P32473 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial1.7e-1033.57Show/hide
Query:  LRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK-----------------------------------------------
        +RP+A+A+    S+ K MTVR+ALNSA+ EE+  D  VFL+GEEV +Y GAYK                                               
Subjt:  LRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK-----------------------------------------------

Query:  ---AIDHIINSASKTNYMFGAFRGTRVLEIVKKHDSGGLV
           AIDH++NSA+KT+YM G   GT+  ++V +  +G  V
Subjt:  ---AIDHIINSASKTNYMFGAFRGTRVLEIVKKHDSGGLV

P52904 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial1.8e-1547.46Show/hide
Query:  LRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK-----------------------------------------------
        +RP+ SA R++SS AK+MTVRDALNSALD EMSAD KVFLMGEEVGEYQGAYK                                               
Subjt:  LRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK-----------------------------------------------

Query:  ---AIDHIINSASKTNYM
           AIDHIINSA+K+NYM
Subjt:  ---AIDHIINSASKTNYM

Q0J0H4 Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial4.1e-2046.94Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRP----AASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK------------------
        M G  R++ G+G     + GQ L+RLRP    AA A+R YS+AAKEMTVR+ALNSALDEEMSADP VFLMGEEVGEYQGAYK                  
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRP----AASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK------------------

Query:  --------------------------------AIDHIINSASKTNYM
                                        AIDHIINSA+K+NYM
Subjt:  --------------------------------AIDHIINSASKTNYM

Q38799 Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial1.7e-1844.76Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        M GI+RQ+A  GAS       +L+R R A  ++R Y++ AKEMTVRDALNSA+DEEMSADPKVF+MGEEVG+YQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+K+NYM
Subjt:  ----------------------------AIDHIINSASKTNYM

Q6Z1G7 Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial8.3e-2147.59Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRP--AASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK--------------------
        M GI R++ G+G +     GQ +Q LRP  AA+A+R YS+AAKEMTVR+ALNSALDEEMSADP VFLMGEEVGEYQGAYK                    
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRP--AASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK--------------------

Query:  ------------------------------AIDHIINSASKTNYM
                                      AIDHIINSA+K+NYM
Subjt:  ------------------------------AIDHIINSASKTNYM

Arabidopsis top hitse value%identityAlignment
AT1G27435.1 unknown protein2.3e-2173.91Show/hide
Query:  GAFRGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE---PPPPKSSGNKIS
        GAF GTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVL+AC E   P PP +S  K S
Subjt:  GAFRGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE---PPPPKSSGNKIS

AT1G30120.1 pyruvate dehydrogenase E1 beta1.5e-0443.1Show/hide
Query:  QRLRPAASASRYYSSAAK---EMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK
        Q+L P A A++   ++A    E+ + +AL   L+EEM  DP V +MGE+VG Y G+YK
Subjt:  QRLRPAASASRYYSSAAK---EMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK

AT2G34590.1 Transketolase family protein2.5e-0445.83Show/hide
Query:  SASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK
        +AS   S    E+ + +AL   L+EEM  DP V +MGE+VG Y G+YK
Subjt:  SASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK

AT5G50850.1 Transketolase family protein1.2e-1944.76Show/hide
Query:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------
        M GI+RQ+A  GAS       +L+R R A  ++R Y++ AKEMTVRDALNSA+DEEMSADPKVF+MGEEVG+YQGAYK                      
Subjt:  MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYK----------------------

Query:  ----------------------------AIDHIINSASKTNYM
                                    AIDHIINSA+K+NYM
Subjt:  ----------------------------AIDHIINSASKTNYM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGAATCGTTCGGCAAAAAGCTGGCGCTGGAGCCTCCTCTATTCTTATTTCCGGGCAGTCTTTGCAGAGACTTCGCCCTGCTGCCTCGGCATCGAGATACTATTC
ATCTGCCGCAAAAGAGATGACAGTGAGAGATGCTCTAAACTCTGCACTTGATGAAGAAATGTCCGCTGATCCTAAAGTATTTTTGATGGGTGAAGAGGTTGGAGAATATC
AGGGTGCCTATAAGGCCATTGATCATATCATTAATTCTGCGTCAAAAACAAATTATATGTTTGGTGCATTTCGGGGGACTCGAGTATTGGAGATTGTGAAGAAACACGAT
TCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTAACCACCACCCGTAAAGCCAACGCCAAAAAAAGACTTCTTCGTGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGTTC
CGAGCCGCCACCACCTAAATCTTCAGGAAATAAAATTAGCCAAGTTGGAAAAAATGAGTAA
mRNA sequenceShow/hide mRNA sequence
CGTTCCGTTGCCTCACAATGGCAGTACTTTGCGGAGTTTTAATTATTAGAAATCAAAGAGTAATTAGGAAAAAAAGAATAGAAAAAGGAAAATCCATAAGTAGAAATTGG
AAAAAGGAAAAAAAAAGAAAAAGAAATATAATTAATTTTAGGAGAGTTTGGTAAGGTGATACCGTGGTAGTGACCTACCGTCTTCAAACCCCTCCATTTCCCAAATCCCC
CGTCTGATCGGATCCAACTCTTTGCTTGCAGTGATCTAAACTCCATATACGCCGGCCAAAGCAATCTTTCGCGCAAGAGAAATGTGGGGAATCGTTCGGCAAAAAGCTGG
CGCTGGAGCCTCCTCTATTCTTATTTCCGGGCAGTCTTTGCAGAGACTTCGCCCTGCTGCCTCGGCATCGAGATACTATTCATCTGCCGCAAAAGAGATGACAGTGAGAG
ATGCTCTAAACTCTGCACTTGATGAAGAAATGTCCGCTGATCCTAAAGTATTTTTGATGGGTGAAGAGGTTGGAGAATATCAGGGTGCCTATAAGGCCATTGATCATATC
ATTAATTCTGCGTCAAAAACAAATTATATGTTTGGTGCATTTCGGGGGACTCGAGTATTGGAGATTGTGAAGAAACACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAA
GCTAACCACCACCCGTAAAGCCAACGCCAAAAAAAGACTTCTTCGTGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGTTCCGAGCCGCCACCACCTAAATCTTCAGGAA
ATAAAATTAGCCAAGTTGGAAAAAATGAGTAAGGACTCCATAGGAGGATCCAAAAGAGTTTGGCAACTTCGGCATTGCAGTGCCAGTTTTCCTCCCTTATTTAGGCCTTT
TAGAAAGGAAAAGTAAACATTAAGCAGATTTGAGTGATGTCAAAAGTTTTCATCCTCATATGTAAGTGATAACGATACACTATTGTGGAATTACTGATCTTGATTTTTAC
ATCCTTTTTATTCAAGATTGTTAGTTTTTCATGGTCCTTGCTCCCTCATGAATGGCTCGTCTTTCAGTAAAGATATCTGATATTTTGCTTTCTGAGCAAATTCACTATTG
AAGTTTAGGGCTGAAAATATCTGACCTGGAGAAGGCAAGCCTTCAAGAAAAAGTTCATCCTTTCTATTGTTTGTGCAGTGTATTTTTAACTGGTCAAAACCCATAAGAAC
ACACTATGGATTTTGTATGATCAAGTTGAATAAGAAGCCTTGTAGGTAGGTTGATGGAAGATGAAACTATTTGAACTTTTATTGGAATGCTTACTCCTTACTTCTTTATG
TTGGATTGGCAGAAAATATGAATATGATACATAATGCCTAATGGTACTATCCAAATTCTTATTGAGGTATAAACAGGTTGGAAGAAAACAAAAAGTATAATAATGTAATC
CAGTTGAAAAACCATGATCTGTATTGTATTGTATTGAATGTGACTGATATATGAACTTCACATACAGTTGCAATTTGTTTAGTAGCAATTTCTGCAGCTATCTCTATATA
TAACTC
Protein sequenceShow/hide protein sequence
MWGIVRQKAGAGASSILISGQSLQRLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKVFLMGEEVGEYQGAYKAIDHIINSASKTNYMFGAFRGTRVLEIVKKHD
SGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPPKSSGNKISQVGKNE