| GenBank top hits | e value | %identity | Alignment |
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| KAG6592199.1 hypothetical protein SDJN03_14545, partial [Cucurbita argyrosperma subsp. sororia] | 3.3e-74 | 88.89 | Show/hide |
Query: FSSDRGFQWLFLLLGIFSVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDK
+ SDR + L VSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDK
Subjt: FSSDRGFQWLFLLLGIFSVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDK
Query: VQEETKSRADRKPPGVGRGRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
VQEETKSR DRKPPGVGRGRGRGREDGPGGRP+KGMGRGFDDGAKAASGGRGKG GGK GANRVGGRGRG
Subjt: VQEETKSRADRKPPGVGRGRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.1e-74 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 1.7e-75 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022975088.1 sm-like protein LSM4 isoform X1 [Cucurbita maxima] | 4.2e-74 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKGG GGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 2.4e-77 | 92.73 | Show/hide |
Query: FQWLFLLLGIFSVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK
+ W+ + VSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK
Subjt: FQWLFLLLGIFSVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK
Query: SRADRKPPGVGRGRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
SRADRKPPGVGRGRGRGREDGPGGRPAKGMGRGFDD AKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: SRADRKPPGVGRGRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 8.3e-76 | 98.04 | Show/hide |
Query: VSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGR
+SLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGR
Subjt: VSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGR
Query: GRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRGRGREDGPG RPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 5.4e-75 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 8.3e-76 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1ID83 U6 snRNA-associated Sm-like protein LSm4 | 2.1e-74 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKGG GGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 8.3e-76 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 3.3e-53 | 77.85 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.2e-58 | 82.67 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: -GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GR+D GR KG+GRG DDG + GRGKGGP K G R GGRGRG
Subjt: -GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 9.9e-58 | 82.78 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
Query: RGR-EDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
RG PGGR G+GRG DDG GGRG+GG GGK G + GGRGRG
Subjt: RGR-EDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 3.5e-39 | 64.29 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
++ GR G GRG F + G G+G P KPG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.1e-56 | 81.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRE+G G R +G GR AKA RG+G GK G GGRGRG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 9.3e-11 | 34.06 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ GVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
Query: GRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
GRG R G+PA G GRG +GGRG P
Subjt: GRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 1.8e-09 | 32.09 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + GVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
AKG GRG GGRG P
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 9.6e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 2.0e-05 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 2.3e-54 | 77.85 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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