; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001716 (gene) of Snake gourd v1 genome

Gene IDTan0001716
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L32, putative
Genome locationLG05:76996718..76998919
RNA-Seq ExpressionTan0001716
SyntenyTan0001716
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001515 - Ribosomal protein L32e
IPR036351 - Ribosomal protein L32e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573344.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-6598.5Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022927470.1 60S ribosomal protein L32-1 [Cucurbita moschata]3.3e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_023519489.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo]4.3e-6596.99Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLSKK+VKKRT+KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_023542869.1 60S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo]5.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKRT KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_038894346.1 60S ribosomal protein L32-1 [Benincasa hispida]4.3e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRTKKFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

TrEMBL top hitse value%identityAlignment
A0A6J1CF23 60S ribosomal protein L32-14.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKR +KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1EP15 60S ribosomal protein L32-11.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1GUI9 60S ribosomal protein L32-1-like4.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1K6F1 60S ribosomal protein L32-1-like4.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1KGP3 60S ribosomal protein L32-11.6e-6597.74Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLSKKIVKKRT+KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

SwissProt top hitse value%identityAlignment
E2RKA8 60S ribosomal protein L323.9e-4569.23Show/hide
Query:  PLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKRTKKF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

P49211 60S ribosomal protein L32-12.5e-6086.47Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

P62910 60S ribosomal protein L323.9e-4569.23Show/hide
Query:  PLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKRTKKF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q76KA3 60S ribosomal protein L323.9e-4569.23Show/hide
Query:  PLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKRTKKF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q9FHG2 60S ribosomal protein L32-21.6e-5984.21Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

Arabidopsis top hitse value%identityAlignment
AT4G18100.1 Ribosomal protein L32e1.8e-6186.47Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.1 Ribosomal protein L32e1.2e-6084.21Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.2 Ribosomal protein L32e1.2e-6084.21Show/hide
Query:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGAACCAAGAAGTTCAAGAGGCCACAAAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGACCAAA
GGGTATTGATTCAAGAGTTAGAAGAAAGTTCAAAGGATGCACACTGATGCCAAACATTGGTTACGGCACTGACAAGAAGACCCGCCACTACTTGCCTAATGGGTTCAAGA
AATTCGTTGTTCACAATGTCAAGGAGCTTGAAGTCTTGATGATGCACAACAGGACTTACTGTGCTGAAATTGCACACGATGTTTCCACAAGGAAGAGGAAAGAAATTGTT
GAGAGAGCAGCTCAACTTGATGTCGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGA
mRNA sequenceShow/hide mRNA sequence
GTCGAAGCTTGGACGGCCAAAGAAACCCTAGCATCTGTATAAGCGAAAATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGAACCAAGAAGTTCAAGAGGCC
ACAAAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCAAGAGTTAGAAGAAAGTTCAAAGGATGCACACTGATGCCAAACATTGGTT
ACGGCACTGACAAGAAGACCCGCCACTACTTGCCTAATGGGTTCAAGAAATTCGTTGTTCACAATGTCAAGGAGCTTGAAGTCTTGATGATGCACAACAGGACTTACTGT
GCTGAAATTGCACACGATGTTTCCACAAGGAAGAGGAAAGAAATTGTTGAGAGAGCAGCTCAACTTGATGTCGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGA
GGATGAATGAACAATTAATGCGGTTTTCATTGTGCTCTGTAGTGAGATTTGGTTAATATATATTATTTTTGGTTCAAGAGATTTTGATATTTGATGAGCTCTGAATTTTA
CAACTTTCACTTCCAACAATATATATTTGGAACTTTGAATTTTGAGTTGTTTAATGCCTCCTTCATGCGTGTTTACAATGATTATTCAACGTGTTTAAATGCTCCTTCAA
AATTTGAAAGTAGATGATACAAACAAAAGAGATCTGTTTATTATATTTCAACACATTTCTTTTTGTAAATGAGATTTTAGAGCAATAAGATCCCTTATATTCTG
Protein sequenceShow/hide protein sequence
MAVPLLSKKIVKKRTKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIV
ERAAQLDVVVTNKLARLRSQEDE