; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001723 (gene) of Snake gourd v1 genome

Gene IDTan0001723
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionbinding partner of ACD11 1-like
Genome locationLG05:25194078..25196736
RNA-Seq ExpressionTan0001723
SyntenyTan0001723
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042981.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]1.9e-10688.89Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE
        MA RTVRV NVSL ATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAP  +PVSTP  +
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE

Query:  NTGS--GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAG
        NT S   TAGSA+QK EDVV+S+LAKGFT+GKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA VSNAG
Subjt:  NTGS--GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAG

Query:  SAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS
        SA+MANRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+SS
Subjt:  SAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS

XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]7.5e-10889.72Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE
        MA RTVRV NVSL ATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKDSKGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAP  +PVSTP  +
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE

Query:  NTGS---GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNA
        NT S    TAGSAMQKAEDVV+S+LAKGFT+GKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA VSNA
Subjt:  NTGS---GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNA

Query:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS
        GSAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+SS
Subjt:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]1.9e-10687.3Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +RTVRV NVSL A+EKDLRDFFSFSGEIEFVEMRKDNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIASAPDY+LPAV ASAPLPVS+P+ EN GS
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN
        GTAGSAMQKAEDVV+S+LAKGFT+GKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA V+NAG+A+MAN
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.2e-11090.84Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE
        MAMRTVRV NVSL  TEKDLRDFFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIASAPDYNLPAV ASAP  +PVSTP T+
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE

Query:  NTGSG--TAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAG
        NT SG  TAGSAMQKAEDVV+S+LAKGFT+GKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA VSNAG
Subjt:  NTGSG--TAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAG

Query:  SAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSSS
        SAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVL EDQGKHVG+SS
Subjt:  SAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSSS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.4e-10990.76Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTENT
        MRTVRV NVSL  TEKDLRDFFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIASAPDYNLPAV ASAP  +PVSTP T+NT
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTENT

Query:  GSG--TAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSA
         SG  TAGSAMQKAEDVV+S+LAKGFT+GKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA VSNAGSA
Subjt:  GSG--TAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSSS
        IM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVL EDQGKHVG+SS
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein3.7e-10889.72Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE
        MA RTVRV NVSL ATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKDSKGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAP  +PVSTP  +
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE

Query:  NTGS---GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNA
        NT S    TAGSAMQKAEDVV+S+LAKGFT+GKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA VSNA
Subjt:  NTGS---GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNA

Query:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS
        GSAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+SS
Subjt:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X19.0e-10788.89Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE
        MA RTVRV NVSL ATEKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI+SAPDYNLPAV ASAP  +PVSTP  +
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAP--LPVSTPTTE

Query:  NTGS--GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAG
        NT S   TAGSA+QK EDVV+S+LAKGFT+GKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA VSNAG
Subjt:  NTGS--GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAG

Query:  SAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS
        SA+MANRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+SS
Subjt:  SAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSSS

A0A6J1D4Q0 binding partner of ACD11 1-like isoform X12.1e-10386.53Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +RTVRVANVSL ATEKDLRDFFSFSGEIEFVEMRKD+ERSQVAFVTFKDSKGAETSILLSGATIVDQPVSI S PDYNLPA  A +P  VSTP TENTGS
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN
         T GSAM+KAEDVV+S+LAKGF++GKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKISVGTTVVNE+VR+MDEKFQVSEKTKA VS AGSAIM N
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEK-VLAEDQGKHVGSS
        RYVSTGASWV++ FQRVAK AV+VSQKTKEK VLAEDQGK+VG+S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEK-VLAEDQGKHVGSS

A0A6J1G681 binding partner of ACD11 1-like1.7e-10586.48Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +RTVRV NVSL A+EKDLRDFFSFSGEIE VEMRKDNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIASAPDY+LPAV ASAPLPVS+P+ EN GS
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN
        GTAGSAM KAEDVV+S+LAKGFT+GKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA V+NAG+A+MAN
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

A0A6J1L7W4 binding partner of ACD11 1-like1.2e-10686.89Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +RTVRV NVSL A+EKDLRDFFSFSGEIEFVEMRKDNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIA+APDYNLPAV ASAPLPVS+P+ EN GS
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN
        GTAGSAMQKAEDVV+S+LAKGFT+GKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA V+NAG+A+MAN
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

SwissProt top hitse value%identityAlignment
P87216 Protein vip12.3e-0628.21Show/hide
Query:  VRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGSGTA
        V V N+S   TEK + DFFSF G++  +   K  E +Q A + F+     +T++LL  A +    + I S         GA++       TT+  G+G  
Subjt:  VRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGSGTA

Query:  GSAMQKAED---VVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK---TKAVVS
         +A Q+ +    +++ +L++G+ +    L K+   D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K   T ++VS
Subjt:  GSAMQKAED---VVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK---TKAVVS

Q9LFD5 Binding partner of ACD11 11.2e-6056.2Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +R+V+V N+S GATE D+++FFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA           P  E   S
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VSNA
        G A S +QKAEDVV+S+LAKGF +GKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+V       VS+A
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VSNA

Query:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        GSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-6858.23Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENT
        M M TV+V+NVSLGAT++DL++FFSFSG+I ++E + + ER+++A+VTFKD +GAET++LLSGATIVD  V ++ APDY L    +   L    P   N 
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENT

Query:  GSGTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------VVS
              S ++KAEDVV+S+LAKGF +GKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKTK+        VS
Subjt:  GSGTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------VVS

Query:  NAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQGK
        NAGSAIM NRYV TGA+WV+  F +VAKAA +V QK KEKV +AE++ K
Subjt:  NAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQGK

AT5G16840.1 binding partner of acd11 18.7e-6256.2Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +R+V+V N+S GATE D+++FFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA           P  E   S
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VSNA
        G A S +QKAEDVV+S+LAKGF +GKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+V       VS+A
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VSNA

Query:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        GSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G16840.2 binding partner of acd11 13.5e-6356.2Show/hide
Query:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS
        +R+V+V N+S GATE D+++FFSFSGE+E ++++  NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA           P  E   S
Subjt:  MRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGS

Query:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VSNA
        G A S +QKAEDVV+S+LAKGF +GKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+V       VS+A
Subjt:  GTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VSNA

Query:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        GSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  GSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G16840.3 binding partner of acd11 17.9e-6356.56Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENT
        MA+R+V+V N+S GATE D+++FFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA           P  E  
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENT

Query:  GSGTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VS
         SG A S +QKAEDVV+S+LAKGF +GKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+V       VS
Subjt:  GSGTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAV-------VS

Query:  NAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
        +AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  NAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-6555.82Show/hide
Query:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLP--AVGASAPLPVSTPTTE
        M+M TV+V+NVSL ATE+DL++FFSFSG+I ++E + +N+ S++A+VTFKD +GAET++LL+G+TIVD  V++  +PDY LP  A+ +   L  S  ++ 
Subjt:  MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLP--AVGASAPLPVSTPTTE

Query:  NTGSGTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------V
         T      S  +KAEDVV+ +++KGF +GKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKTK+        
Subjt:  NTGSGTAGSAMQKAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------V

Query:  VSNAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQ
        VSNAGSAIM NRYV TGA+WV+  F RV+KAA +V QK KEKV LAE++
Subjt:  VSNAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGAGAACGGTGAGAGTTGCCAATGTCTCGTTGGGTGCGACGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAA
GGACAATGAGCGATCTCAAGTTGCTTTTGTTACCTTTAAGGATTCGAAGGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATTG
CTTCTGCTCCAGATTACAACCTTCCTGCTGTTGGTGCCAGTGCCCCTCTACCAGTGTCTACTCCAACTACAGAGAACACAGGCTCTGGGACTGCTGGATCTGCAATGCAA
AAGGCAGAGGATGTTGTGACCAGCGTGCTGGCCAAAGGCTTCACTGTGGGCAAAGATGCTCTAAATAAGGCAAAGTCTTTTGATGAGAGGCACCAGTTGACATCGACAGC
CTCATCCAAAGTCGCTTCTCTTGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGACGGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAG
TGTCTGAGAAGACCAAGGCGGTGGTGAGCAATGCAGGATCAGCCATAATGGCTAACCGCTATGTCTCAACCGGGGCTTCTTGGGTTAGCCAGACGTTTCAAAGAGTTGCC
AAAGCGGCCGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTGGGAAGTTCGTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAACTTGGATTGGGAACCTCTCGGGTGGATCAGACGGAACATCATGGCGATGAGAACGGTGAGAGTTGCCAAT
GTCTCGTTGGGTGCGACGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAGCGATCTCAAGTTGCTTTTGT
TACCTTTAAGGATTCGAAGGGGGCAGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTTCTGCTCCAGATTACAACCTTCCTGCTG
TTGGTGCCAGTGCCCCTCTACCAGTGTCTACTCCAACTACAGAGAACACAGGCTCTGGGACTGCTGGATCTGCAATGCAAAAGGCAGAGGATGTTGTGACCAGCGTGCTG
GCCAAAGGCTTCACTGTGGGCAAAGATGCTCTAAATAAGGCAAAGTCTTTTGATGAGAGGCACCAGTTGACATCGACAGCCTCATCCAAAGTCGCTTCTCTTGACCAAAA
GATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGACGGTGGTGAATGAGAAAGTGAGAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCGGTGGTGAGCA
ATGCAGGATCAGCCATAATGGCTAACCGCTATGTCTCAACCGGGGCTTCTTGGGTTAGCCAGACGTTTCAAAGAGTTGCCAAAGCGGCCGTAGATGTTAGCCAGAAAACG
AAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTGGGAAGTTCGTCTTAAGTCTCATCAAAGAATCGCTGCACTCCAAATGTGTGTAGCCCCCAGACCATATCCCA
ATATATAAATCATATATATTTCGCCAAAACAATGTGAGGACCTATTTCCTCTTAGCTTGCTATTTTCATCTCATTTGATTGATATGTTTTTATGCTTTATTTTAGTTTTT
AGTATTAGGGACTACACAAATAAGCTACATGCTTATGTTGTAATTCAACTGTAAGAAAAGCATATATGCTATGTGATAAAGTATCCAGAGTTAATTTTTTTATTTAAAAA
AAATCTTTTTTTGTTAATGAAAAACCGC
Protein sequenceShow/hide protein sequence
MAMRTVRVANVSLGATEKDLRDFFSFSGEIEFVEMRKDNERSQVAFVTFKDSKGAETSILLSGATIVDQPVSIASAPDYNLPAVGASAPLPVSTPTTENTGSGTAGSAMQ
KAEDVVTSVLAKGFTVGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAVVSNAGSAIMANRYVSTGASWVSQTFQRVA
KAAVDVSQKTKEKVLAEDQGKHVGSSS