; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001748 (gene) of Snake gourd v1 genome

Gene IDTan0001748
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein Ycf2-like
Genome locationLG03:56431822..56436863
RNA-Seq ExpressionTan0001748
SyntenyTan0001748
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR015410 - Domain of unknown function DUF1985


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025875.1 uncharacterized protein E6C27_scaffold34G001540 [Cucumis melo var. makuwa]6.7e-3054.55Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ E +   +LN+ F ++   T DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRVAF+LL+++M +
Subjt:  LFNSYTWGRVAFQLLIKYMKK

KAA0040869.1 protein Ycf2-like [Cucumis melo var. makuwa]1.5e-2953.72Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C   + I+ E IKGGG LK VYFE+ + +   +LN+ F ++   T+DD +KMA+LY LESFL+ +QE ++V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRVAF+LL+ +M +
Subjt:  LFNSYTWGRVAFQLLIKYMKK

KAA0067175.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-2953.72Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ + +   +LN+ F ++   T+DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRV F+LL+ +M K
Subjt:  LFNSYTWGRVAFQLLIKYMKK

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]2.5e-2953.28Show/hide
Query:  DKVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDE
        ++VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ + +   +LN+ F ++   T+DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+
Subjt:  DKVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDE

Query:  ELFNSYTWGRVAFQLLIKYMKK
        E+F+ Y WGRVAF+LL+ +M +
Subjt:  ELFNSYTWGRVAFQLLIKYMKK

TYK22588.1 protein Ycf2-like [Cucumis melo var. makuwa]6.7e-3054.55Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ E +   +LN+ F ++   T DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRVAF+LL+++M +
Subjt:  LFNSYTWGRVAFQLLIKYMKK

TrEMBL top hitse value%identityAlignment
A0A5A7SN41 DUF1985 domain-containing protein3.2e-3054.55Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ E +   +LN+ F ++   T DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRVAF+LL+++M +
Subjt:  LFNSYTWGRVAFQLLIKYMKK

A0A5A7THT9 Protein Ycf2-like7.2e-3053.72Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C   + I+ E IKGGG LK VYFE+ + +   +LN+ F ++   T+DD +KMA+LY LESFL+ +QE ++V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRVAF+LL+ +M +
Subjt:  LFNSYTWGRVAFQLLIKYMKK

A0A5A7VN68 Protein Ycf2-like9.4e-3053.72Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ + +   +LN+ F ++   T+DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRV F+LL+ +M K
Subjt:  LFNSYTWGRVAFQLLIKYMKK

A0A5D3CEX9 Protein Ycf2-like1.2e-2953.28Show/hide
Query:  DKVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDE
        ++VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ + +   +LN+ F ++   T+DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+
Subjt:  DKVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDE

Query:  ELFNSYTWGRVAFQLLIKYMKK
        E+F+ Y WGRVAF+LL+ +M +
Subjt:  ELFNSYTWGRVAFQLLIKYMKK

A0A5D3DGJ6 Protein Ycf2-like3.2e-3054.55Show/hide
Query:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE
        +VL FGLR+FALITGL C     I+ E IKGGG+LK VYFE+ E +   +LN+ F ++   T DD +KMA+LY LESFL+ +QE + V+ DHI+MVDD+E
Subjt:  KVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAFKVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEE

Query:  LFNSYTWGRVAFQLLIKYMKK
        +F+ Y WGRVAF+LL+++M +
Subjt:  LFNSYTWGRVAFQLLIKYMKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGGTGACAATGAGACAACTGAAAATAATGTTGGAGATTTCGGGAACGAGTCAGGGGATAATAATGCAAAAGATTCATTGGTGCACTTTACTTCTAGCACAGA
TGATGACAAAGACGAACCACCCACCAAAAAGGCAAGGAAGGGACCACCTGTTGATAAGGTCCTGAGTTTTGGATTAAGAGACTTTGCTTTGATTACTGGGTTGAACTGCG
GATCAAACACACAAATCGACTGGGAGAAGATAAAGGGAGGAGGACAACTTAAGAATGTATACTTCGAGGACGAAGAAAATATGAAACACTCGTTTCTGAATATGGCTTTC
AAAGTCAACAAAATGGCGACAGAGGACGACATGGTAAAGATGGCACAGTTGTACTGCTTGGAGAGTTTCCTACTCCTTAGACAAGAGAAGGTGCATGTAGAGAACGATCA
TATCCTCATGGTTGACGACGAAGAACTATTTAATTCTTACACATGGGGGCGAGTTGCATTTCAGTTATTGATCAAATACATGAAAAAATTTGCTGGCAAGTCGAGGCAAC
AACGGAGTAGGCATGGGAGGATTCATCTATGCTCTCATGGCTTGGGCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGGTGACAATGAGACAACTGAAAATAATGTTGGAGATTTCGGGAACGAGTCAGGGGATAATAATGCAAAAGATTCATTGGTGCACTTTACTTCTAGCACAGA
TGATGACAAAGACGAACCACCCACCAAAAAGGCAAGGAAGGGACCACCTGTTGATAAGGTCCTGAGTTTTGGATTAAGAGACTTTGCTTTGATTACTGGGTTGAACTGCG
GATCAAACACACAAATCGACTGGGAGAAGATAAAGGGAGGAGGACAACTTAAGAATGTATACTTCGAGGACGAAGAAAATATGAAACACTCGTTTCTGAATATGGCTTTC
AAAGTCAACAAAATGGCGACAGAGGACGACATGGTAAAGATGGCACAGTTGTACTGCTTGGAGAGTTTCCTACTCCTTAGACAAGAGAAGGTGCATGTAGAGAACGATCA
TATCCTCATGGTTGACGACGAAGAACTATTTAATTCTTACACATGGGGGCGAGTTGCATTTCAGTTATTGATCAAATACATGAAAAAATTTGCTGGCAAGTCGAGGCAAC
AACGGAGTAGGCATGGGAGGATTCATCTATGCTCTCATGGCTTGGGCATATGA
Protein sequenceShow/hide protein sequence
MEKGDNETTENNVGDFGNESGDNNAKDSLVHFTSSTDDDKDEPPTKKARKGPPVDKVLSFGLRDFALITGLNCGSNTQIDWEKIKGGGQLKNVYFEDEENMKHSFLNMAF
KVNKMATEDDMVKMAQLYCLESFLLLRQEKVHVENDHILMVDDEELFNSYTWGRVAFQLLIKYMKKFAGKSRQQRSRHGRIHLCSHGLGI