; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001764 (gene) of Snake gourd v1 genome

Gene IDTan0001764
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein DCL homolog, chloroplastic
Genome locationLG01:113820775..113823740
RNA-Seq ExpressionTan0001764
SyntenyTan0001764
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]6.1e-11288Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+SIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAK LAG SEDD+SSEESGN ++EE D
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFRR
        RKNYPL+AESFILRHFRRRR N RR
Subjt:  RKNYPLHAESFILRHFRRRRHNFRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]2.3e-11186.67Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+SILKPPPF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKPV P AK LAG SEDD+SSEESGN D+EE +
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFRR
        RKNYPL+AESFILRHFRRRR N RR
Subjt:  RKNYPLHAESFILRHFRRRRHNFRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]6.1e-11288Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+SIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAK LAG SEDD+SSEESGN ++EE D
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFRR
        RKNYPL+AESFILRHFRRRR N RR
Subjt:  RKNYPLHAESFILRHFRRRRHNFRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]2.0e-11591.07Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+S+ KPPPF PFHSLNPSF NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPAK  A +SEDDE SEESG   +EEED
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFR
        RKNYPLHAESFILRHFRRRR N+R
Subjt:  RKNYPLHAESFILRHFRRRRHNFR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]3.3e-11892.51Show/hide
Query:  MVMAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEE
        M+MAM+SILKPPPFVP HSLNP+FFNSSPVILCFPT PMTSFH STRALKTGPEGSRIRSHEEYSSDLLRKPVVPPA+ LA +SEDD+SSEESGN D+EE
Subjt:  MVMAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEE

Query:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRL+PEHEKTILDRLLPYHPE EKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
Subjt:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKNYPLHAESFILRHFRRRRHNFRR
        LIRK YPLHAESFILRHFRRRR NFRR
Subjt:  LIRKNYPLHAESFILRHFRRRRHNFRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein1.1e-11186.67Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+SILKPPPF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKPV P AK LAG SEDD+SSEESGN D+EE +
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFRR
        RKNYPL+AESFILRHFRRRR N RR
Subjt:  RKNYPLHAESFILRHFRRRRHNFRR

A0A1S3BVA4 protein DCL, chloroplastic2.9e-11288Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+SIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAK LAG SEDD+SSEESGN ++EE D
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFRR
        RKNYPL+AESFILRHFRRRR N RR
Subjt:  RKNYPLHAESFILRHFRRRRHNFRR

A0A5A7VDC9 Protein DCL2.9e-11288Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+SIL   PF PFHSLNP+FFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAK LAG SEDD+SSEESGN ++EE D
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFRR
        RKNYPL+AESFILRHFRRRR N RR
Subjt:  RKNYPLHAESFILRHFRRRRHNFRR

A0A6J1BTU2 protein DCL homolog, chloroplastic9.7e-11691.07Show/hide
Query:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED
        MAM+S+ KPPPF PFHSLNPSF NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPAK  A +SEDDE SEESG   +EEED
Subjt:  MAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRRRRHNFR
        RKNYPLHAESFILRHFRRRR N+R
Subjt:  RKNYPLHAESFILRHFRRRRHNFR

A0A6J1IM57 protein DCL homolog, chloroplastic-like5.5e-11186.78Show/hide
Query:  MVMAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEE
        MV+AM+SILKPPP VP HSLNP+  N+SPVI+CF THPMTSFHPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPA  LA  SED  SSEESGNGD+EE
Subjt:  MVMAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEE

Query:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        E+WVDWED+ILE+TVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLL YHPECEKKIGCGIDYITIGYHP+FE SRCLFIVRKDGELVDFSYWKC++G
Subjt:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKNYPLHAESFILRHFRRRRHNFRR
        LIRKNYPLHAESFILRHF+RRR +F R
Subjt:  LIRKNYPLHAESFILRHFRRRRHNFRR

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)5.7e-0481.82Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMV
        WVDWED+IL+DTVPLV FVRM+
Subjt:  WVDWEDKILEDTVPLVGFVRMV

Q42463 Protein DCL, chloroplastic6.6e-6970Show/hide
Query:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSED---DESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTI
        A+KTG EG  IRS    +++LLRKPV+         SE+   +ES +E G    + E WVDWED+ILEDTVPLVGFVRM+LHSGKY  GDRLSP+H++TI
Subjt:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSED---DESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTI

Query:  LDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN
        L RLLPYHPEC+KKIG G+DYIT+GYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPL+A+SFILRHFR+RR N
Subjt:  LDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN

Q5D869 DNA-directed RNA polymerase V subunit 18.7e-2137.19Show/hide
Query:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLHAESFILRHFRRRRHNFRR
        P  AE FI ++F + R +  R
Subjt:  PLHAESFILRHFRRRRHNFRR

Q8L557 Protein EMBRYO DEFECTIVE 5143.9e-0529.51Show/hide
Query:  SEDDESSEESGN---GDDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCL
        +E++E+  ES     G++E+   V    K    +V +  +    LH   + +   ++      +LD +   H E EKKIG GI    +  HP ++ SRC 
Subjt:  SEDDESSEESGN---GDDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCL

Query:  FIVRKDGELVDFSYWKCIKGLI
        F+VR+D    DFS+ KC+  ++
Subjt:  FIVRKDGELVDFSYWKCIKGLI

Q9C642 Protein DCL homolog, chloroplastic2.2e-7265Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMV
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +   +      E++E  EE+  GD    ++VDWEDKILE TVPLVGFVRM+
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMV

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN
        LHSGKY + DRLSPEHE+TI++ LLPYHPECEKKIGCGIDYI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPL+A+SFILRHFR+RR N
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)1.6e-7365Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMV
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +   +      E++E  EE+  GD    ++VDWEDKILE TVPLVGFVRM+
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMV

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN
        LHSGKY + DRLSPEHE+TI++ LLPYHPECEKKIGCGIDYI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPL+A+SFILRHFR+RR N
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN

AT1G45230.2 Protein of unknown function (DUF3223)1.3e-7264.5Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMV
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +   +      E++E  EE+  GD    ++VDWEDKILE TVPLVGFVRM+
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKILEDTVPLVGFVRMV

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN
        LHSGKY + DRLSPEHE+TI++ LLPYHPECEKKIGCGIDYI + +HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPL+A+SFILRHFR+RR N
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRRHN

AT2G40030.1 nuclear RNA polymerase D1B6.2e-2237.19Show/hide
Query:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT+  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLHAESFILRHFRRRRHNFRR
        P  AE FI ++F + R +  R
Subjt:  PLHAESFILRHFRRRRHNFRR

AT3G46630.1 Protein of unknown function (DUF3223)3.0e-3247.58Show/hide
Query:  DDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWK
        D +   W + E +IL D  P+    + +LHS +Y  G+RL  E EK ++++LLPYHP  + KIGCG+D+I +  HP F  SRCLF+VR DG  +DFSY K
Subjt:  DDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWK

Query:  CIKGLIRKNYPLHAESFILRHFRR
        C++  +R  YP HAE FI  HF+R
Subjt:  CIKGLIRKNYPLHAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)2.8e-0629.51Show/hide
Query:  SEDDESSEESGN---GDDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCL
        +E++E+  ES     G++E+   V    K    +V +  +    LH   + +   ++      +LD +   H E EKKIG GI    +  HP ++ SRC 
Subjt:  SEDDESSEESGN---GDDEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCL

Query:  FIVRKDGELVDFSYWKCIKGLI
        F+VR+D    DFS+ KC+  ++
Subjt:  FIVRKDGELVDFSYWKCIKGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCCATGTCGTCCATTTTGAAGCCACCGCCATTTGTGCCCTTTCACTCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACGCA
CCCAATGACGTCGTTTCACCCATCCACTCGTGCCCTAAAGACTGGCCCTGAAGGCAGTAGAATTCGGAGCCACGAAGAGTATAGCTCCGATTTGCTGCGGAAGCCGGTTG
TTCCGCCGGCGAAGGGTTTGGCTGGAGTATCGGAGGATGACGAGAGCAGCGAGGAGAGCGGAAATGGCGATGATGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATT
TTGGAGGATACTGTTCCTCTAGTCGGCTTTGTTAGGATGGTTCTTCATTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGACAG
GTTGCTACCATATCATCCCGAGTGTGAGAAGAAGATTGGATGTGGGATTGATTATATCACGATTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCA
GAAAAGATGGAGAGTTGGTGGATTTTTCATACTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGACGA
CGTAGACACAATTTCCGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
GCCAAGCAGAGGATGCGGATTGAGGAGAAATCCTGTAGAATCTCCAAATCCATGAAATTGATGATAATGTGAGTGACCGTTAACAGTTCTTCTTCCTCCGGTTTCTTTTT
CAGAGAATTAGGAGAAAAGCCATGCTCGGCAATCGCAAGCTTCCATCTCATTCTCAATAGTTACAAATTCAAGCTCCTTGTTTCAATTGAACAAGGGCATGGTCATGGCC
ATGTCGTCCATTTTGAAGCCACCGCCATTTGTGCCCTTTCACTCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACGCACCCAATGACGTC
GTTTCACCCATCCACTCGTGCCCTAAAGACTGGCCCTGAAGGCAGTAGAATTCGGAGCCACGAAGAGTATAGCTCCGATTTGCTGCGGAAGCCGGTTGTTCCGCCGGCGA
AGGGTTTGGCTGGAGTATCGGAGGATGACGAGAGCAGCGAGGAGAGCGGAAATGGCGATGATGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACT
GTTCCTCTAGTCGGCTTTGTTAGGATGGTTCTTCATTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGACAGGTTGCTACCATA
TCATCCCGAGTGTGAGAAGAAGATTGGATGTGGGATTGATTATATCACGATTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAG
AGTTGGTGGATTTTTCATACTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGACGACGTAGACACAAT
TTCCGTCGGTAACACATGCAAGATCTGTTAATCATACTATTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAAATTGACCTACCAAGCTTGTGTATTTC
TCGTGTATAATGATTTGAAATGCGCGAATCAAGATGGATATAGGGTGAATGTAGTAGGCTCTTGCTTGAGGAAGGTGCTAGCAAAATTCAATTTTGTAAATCCTAACAGT
TACCTCCAGTTTTCCTTGATCCAATTTTCACTTAATCTCCGGTAGGTAAACTGGTGAGCTCTCGCACTTCTCAGTAATTCCCGTCACCTAAACTCTCCCGATTTCTTTAT
AGCAGCAATATATTCTCAGATGCTTTTACTTTATAGCCTTTTGTAGTTTAGCCGGATATTATTGTGCGAAAACCTACTGAATTAGAATTAAGAGGGTTTTTATCTAAGGG
GTTCATAATATATTGGGATTGTTTGGTGCGC
Protein sequenceShow/hide protein sequence
MVMAMSSILKPPPFVPFHSLNPSFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKGLAGVSEDDESSEESGNGDDEEEDWVDWEDKI
LEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRR
RRHNFRR