; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001768 (gene) of Snake gourd v1 genome

Gene IDTan0001768
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionU1 small nuclear ribonucleoprotein A isoform X2
Genome locationLG03:71913451..71921369
RNA-Seq ExpressionTan0001768
SyntenyTan0001768
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604168.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]4.7e-15891.05Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLP+DVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPDPGLGSTHMSGM NSAYNT
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT

Query:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP
        IGYPSAQSHGSFD+KTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPP
Subjt:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP

Query:  GEGMRLEYPSTRL
        GEGMRLEY  +R+
Subjt:  GEGMRLEYPSTRL

XP_022133116.1 protein WHI4 [Momordica charantia]1.5e-15992.31Show/hide
Query:  MDDMASYYPP----PPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESS
        MDDMAS+YPP    PP Q SGLEAP+YPYYQV PPPSSAPPSQHYL Q PPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESS
Subjt:  MDDMASYYPP----PPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESS

Query:  HLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTI
        HLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPD GLGSTHMSGM NSAYNTI
Subjt:  HLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTI

Query:  GYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPG
        GYPSAQSHGSFDNK+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPPG
Subjt:  GYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPG

Query:  EGMRLEYPSTRL
        EGMRLEY  +R+
Subjt:  EGMRLEYPSTRL

XP_022949757.1 protein WHI4 isoform X2 [Cucurbita moschata]4.7e-15891.05Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLP+DVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPDPGLGSTHMSGM NSAYNT
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT

Query:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP
        IGYPSAQSHGSFD+KTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPP
Subjt:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP

Query:  GEGMRLEYPSTRL
        GEGMRLEY  +R+
Subjt:  GEGMRLEYPSTRL

XP_023543723.1 protein WHI4 isoform X2 [Cucurbita pepo subsp. pepo]2.7e-15891.05Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLPEDVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPDPGLGSTHMSGM NSAYNT
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT

Query:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP
        IGYPSAQSHGSFD+KTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQEL+Q FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPP
Subjt:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP

Query:  GEGMRLEYPSTRL
        GEGMRLEY  +R+
Subjt:  GEGMRLEYPSTRL

XP_038881694.1 protein WHI4 isoform X2 [Benincasa hispida]2.7e-15892.26Show/hide
Query:  MDDMASYY--PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        MDDMASYY  P PP Q SGLE P+YP+YQV PPPSSAPPSQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
Subjt:  MDDMASYY--PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGY
        R+PTQTTQPFAFAVFSDQQSAIGAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPDPGLGSTHMSGM NSAYNTIGY
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGY

Query:  PSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEG
        PSAQSHGSFDNKTVNDTVAANV PQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDT CSTGALNHLQG+ILYSSPPGEG
Subjt:  PSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEG

Query:  MRLEYPSTRL
        MRLEY  +R+
Subjt:  MRLEYPSTRL

TrEMBL top hitse value%identityAlignment
A0A6J1BU41 protein WHI47.0e-16092.31Show/hide
Query:  MDDMASYYPP----PPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESS
        MDDMAS+YPP    PP Q SGLEAP+YPYYQV PPPSSAPPSQHYL Q PPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESS
Subjt:  MDDMASYYPP----PPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESS

Query:  HLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTI
        HLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPD GLGSTHMSGM NSAYNTI
Subjt:  HLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTI

Query:  GYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPG
        GYPSAQSHGSFDNK+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPPG
Subjt:  GYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPG

Query:  EGMRLEYPSTRL
        EGMRLEY  +R+
Subjt:  EGMRLEYPSTRL

A0A6J1GCW9 U1 small nuclear ribonucleoprotein A isoform X15.6e-15790.76Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLP+DVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDP-GLGSTHMSGMSNSAYN
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPDP GLGSTHMSGM NSAYN
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDP-GLGSTHMSGMSNSAYN

Query:  TIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSP
        TIGYPSAQSHGSFD+KTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSP
Subjt:  TIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSP

Query:  PGEGMRLEYPSTRL
        PGEGMRLEY  +R+
Subjt:  PGEGMRLEYPSTRL

A0A6J1GD02 protein WHI4 isoform X22.3e-15891.05Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLP+DVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS FSRSTPDPGLGSTHMSGM NSAYNT
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT

Query:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP
        IGYPSAQSHGSFD+KTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPP
Subjt:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP

Query:  GEGMRLEYPSTRL
        GEGMRLEY  +R+
Subjt:  GEGMRLEYPSTRL

A0A6J1IMS7 U1 small nuclear ribonucleoprotein A isoform X21.2e-15690.76Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLPEDVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDP-GLGSTHMSGMSNSAYN
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS FSR TPDP GLGSTHMSGM NSAYN
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDP-GLGSTHMSGMSNSAYN

Query:  TIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSP
        TIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSP
Subjt:  TIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSP

Query:  PGEGMRLEYPSTRL
        PGEGMRLEY  +R+
Subjt:  PGEGMRLEYPSTRL

A0A6J1IQG5 protein WHI4 isoform X15.0e-15891.05Show/hide
Query:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ SYY     P PP+Q SGLEAP+YPYYQV PPPSSAP SQHYL Q PPTFASYGLPFLPHAAS+NEVRTLFIAGLPEDVKPREIYNLFREFPGYES
Subjt:  MDDMASYY-----PPPPAQASGLEAPNYPYYQV-PPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT
        SHLRSPTQTTQPFAFAVFSDQQSA+GAMHAVNGM+FDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS FSR TPDPGLGSTHMSGM NSAYNT
Subjt:  SHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNT

Query:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP
        IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG+ILYSSPP
Subjt:  IGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPP

Query:  GEGMRLEYPSTRL
        GEGMRLEY  +R+
Subjt:  GEGMRLEYPSTRL

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a5.1e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR

Q6ZRY4 RNA-binding protein with multiple splicing 23.9e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++   +  QP  F +F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR

Q8VC52 RNA-binding protein with multiple splicing 23.0e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F +F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR

Q9W6I1 RNA-binding protein with multiple splicing 26.6e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR

Q9YGP5 RNA-binding protein with multiple splicing 28.6e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F ++  A  A +A+NG+ FD E    L ++ AK+N++  + +
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.6e-7854.55Show/hide
Query:  MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFA-SYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRS
        MDD+ +YY             N P    PPP    P        P T A S  LP      + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS
Subjt:  MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFA-SYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRS

Query:  PTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPS
         +   +PFAFAVFSD QSA+  MHA+NGM+FDLEK S L++DLAKSN +SKR+RT+D   G +   K+ +++ +T + G GS    GMS+SAYNTIGY  
Subjt:  PTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPS

Query:  AQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMR
        AQS G   N       +   +    PCPTLF+AN+GP+CTE ELIQ FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQGT+LYSS  GE +R
Subjt:  AQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMR

Query:  LEYPSTRL
        L+Y  +R+
Subjt:  LEYPSTRL

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-7853.87Show/hide
Query:  MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFA-SYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRS
        MDD+ +YY             N P    PPP    P        P T A S  LP      + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS
Subjt:  MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFA-SYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRS

Query:  PTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPS
         +   +PFAFAVFSD QSA+  MHA+NGM+FDLEK S L++DLAKSN +SKR+RT+D   G +   K+ +++ +T + G GS    GMS+SAYNTIGY  
Subjt:  PTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPS

Query:  AQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMR
        AQS G   N       +   +    PCPTLF+AN+GP+CTE ELIQ FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQGT+LYSS  GE +R
Subjt:  AQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMR

Query:  LEYPSTRLLFFTIVLLHHVFICF
        L+YPS         LL  +F+CF
Subjt:  LEYPSTRLLFFTIVLLHHVFICF

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-7654.97Show/hide
Query:  MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFA-SYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRS
        MDD+ +YY             N P    PPP    P        P T A S  LP      + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS
Subjt:  MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFA-SYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRS

Query:  PTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPS
         +   +PFAFAVFSD QSA+  MHA+NGM+FDLEK S L++DLAKSN +SKR+RT+D   G +   K+ +++ +T + G GS    GMS+SAYNTIGY  
Subjt:  PTQTTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPS

Query:  AQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMR
        AQS G   N       +   +    PCPTLF+AN+GP+CTE ELIQ FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQGT+LYSS  GE +R
Subjt:  AQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMR

Query:  LE
        L+
Subjt:  LE

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-2934.09Show/hide
Query:  PNYPYYQVPPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR------------------SPTQ
        P Y Y     P   PP    L  +P                   + TLF++GLP DVK REI+NLFR   G+ES  L+                   P  
Subjt:  PNYPYYQVPPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR------------------SPTQ

Query:  TTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTE------DERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNS-AYNTI
             AFA F+  + A+ AM+ +NG+ FD +  S L+++LA+SNSR K           D R     K++         DP        G S+S   N  
Subjt:  TTQPFAFAVFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTE------DERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNS-AYNTI

Query:  GYPSAQSHGSFDNKTVNDTV--AANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSP
            A S       + N  +  A+        C TLF+ANLGP+CTE EL Q  SR PGF  LK+++  G PVAF DF++   +T A+NHLQG +L SS 
Subjt:  GYPSAQSHGSFDNKTVNDTV--AANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSP

Query:  PGEGMRLE
         G GM +E
Subjt:  PGEGMRLE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-3335.81Show/hide
Query:  PNYPYYQVPPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIG
        P Y Y     P   PP    L  +P                   + TLF++GLP DVK REI+NLFR   G+ES  L+   +  Q  AFA F+  + A+ 
Subjt:  PNYPYYQVPPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIG

Query:  AMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTE------DERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNS-AYNTIGYPSAQSHGSFDNKTVND
        AM+ +NG+ FD +  S L+++LA+SNSR K           D R     K++         DP        G S+S   N      A S       + N 
Subjt:  AMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTE------DERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNS-AYNTIGYPSAQSHGSFDNKTVND

Query:  TV--AANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMRLEYPSTRL
         +  A+        C TLF+ANLGP+CTE EL Q  SR PGF  LK+++  G PVAF DF++   +T A+NHLQG +L SS  G GM +EY  +++
Subjt:  TV--AANVTPQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMRLEYPSTRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACATGGCGAGCTACTATCCGCCACCACCGGCGCAGGCTTCTGGTCTTGAAGCTCCTAACTATCCCTATTACCAAGTGCCTCCTCCTTCTTCAGCACCGCCGTC
TCAGCATTACCTCGTCCAACAACCTCCCACCTTCGCTTCCTATGGCTTACCTTTTTTACCTCACGCAGCATCCATGAATGAGGTCCGAACCCTATTCATAGCTGGCCTTC
CCGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATATGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACGCAGCCGTTTGCATTTGCT
GTATTCTCGGACCAGCAGTCTGCCATTGGTGCAATGCATGCAGTAAATGGCATGATGTTTGATCTCGAGAAGCAGTCAGTTCTATATGTTGATTTAGCTAAATCCAATTC
AAGATCTAAGCGGACGAGGACAGAGGATGAAAGATACGGATCAGATAAGAAAGCTAAAGTATCTACGTTTTCAAGGAGCACTCCTGATCCTGGTCTTGGCAGCACTCACA
TGTCTGGAATGAGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGGAGCTTTGATAACAAAACTGTAAATGATACGGTGGCTGCAAATGTGACA
CCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAAGCTGCACAGAGCAAGAGCTTATTCAAAATTTTTCAAGATGCCCGGGGTTCTTAAAACTGAA
AATGCAGAGCACGTATGGGGCCCCAGTTGCTTTTGTTGATTTTCAGGATACTGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGCACAATTCTGTACTCATCACCTC
CTGGAGAGGGCATGCGATTGGAGTATCCTTCTACAAGATTGTTATTCTTTACAATTGTACTGCTACATCATGTCTTCATTTGTTTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATTTGTACTCGAAAAGGAGGCTTAAAATGGGTCATCTCTTTAAACCTTCGAAGTTGGGCCGTTTAGTAGAGTTTAGCTTCTAATCTGAGCCCATTTGGGCGCAATGCTTC
GGCACAATTGAAGCAATCCGACCCAAAGTGCAGGGCTTTCTAGCTCTCTCTCTCTCCCTCTCTACTTCCCGAGACTCAGAGATAACAGCACTCCGATGGACGACATGGCG
AGCTACTATCCGCCACCACCGGCGCAGGCTTCTGGTCTTGAAGCTCCTAACTATCCCTATTACCAAGTGCCTCCTCCTTCTTCAGCACCGCCGTCTCAGCATTACCTCGT
CCAACAACCTCCCACCTTCGCTTCCTATGGCTTACCTTTTTTACCTCACGCAGCATCCATGAATGAGGTCCGAACCCTATTCATAGCTGGCCTTCCCGAAGATGTCAAGC
CCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATATGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACGCAGCCGTTTGCATTTGCTGTATTCTCGGACCAG
CAGTCTGCCATTGGTGCAATGCATGCAGTAAATGGCATGATGTTTGATCTCGAGAAGCAGTCAGTTCTATATGTTGATTTAGCTAAATCCAATTCAAGATCTAAGCGGAC
GAGGACAGAGGATGAAAGATACGGATCAGATAAGAAAGCTAAAGTATCTACGTTTTCAAGGAGCACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGAGTA
ATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGGAGCTTTGATAACAAAACTGTAAATGATACGGTGGCTGCAAATGTGACACCTCAAAATCCCCCA
TGTCCAACACTTTTTGTGGCAAATCTAGGGCCAAGCTGCACAGAGCAAGAGCTTATTCAAAATTTTTCAAGATGCCCGGGGTTCTTAAAACTGAAAATGCAGAGCACGTA
TGGGGCCCCAGTTGCTTTTGTTGATTTTCAGGATACTGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGCACAATTCTGTACTCATCACCTCCTGGAGAGGGCATGC
GATTGGAGTATCCTTCTACAAGATTGTTATTCTTTACAATTGTACTGCTACATCATGTCTTCATTTGTTTTGCTTAACCCGAGACTTAGGTACGCAAAATCACGAATGGG
CATGCGAAAGAAATTGAAATGAATAATACTTGCAGAGAGGATGGAGCCAAAAAGGATATAAGAAGGAAAAAAAGACACTCAGGCCATATTCCCACATGAATTTATGGCCA
GAGGAAGTGCATTGTTTGTACTCTATGTAGATGAGCAAATTAGCAACATATGCCATGTCCATTTTTTTCATTGTATCAAATCCTGCCCTCTTAGTTATGAACTCTTTAAA
TTTCTTTTATATCTTTGGGGGTCCCATTGGATATATTCATTACTGATAAGAAAATCTTTTTCCACTCAATGTCCAGAGAAAGGGCAGAGGTCATGTCCTGCTGAAACCAG
ATAACGTAGAAAAAGCTGTTCGAATATGTATTGTGATATTATGGTCTGTCCACCAAATGGCGAGTTGACAAGTAAATTTTTTGTAGTAAATTCAATTTTCATCCCTGAAC
TCAGTGAATCAAATTCAATTGTGGAGTTTTAATATCTTTTAAATCCTTAAATTTGGATTCTCTGTTGGTTAACTGCATCACCCATAGTTTCTGCCTTTCTGGAGCTTCCT
TGGATTCCCA
Protein sequenceShow/hide protein sequence
MDDMASYYPPPPAQASGLEAPNYPYYQVPPPSSAPPSQHYLVQQPPTFASYGLPFLPHAASMNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
VFSDQQSAIGAMHAVNGMMFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSTFSRSTPDPGLGSTHMSGMSNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVT
PQNPPCPTLFVANLGPSCTEQELIQNFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTILYSSPPGEGMRLEYPSTRLLFFTIVLLHHVFICFA