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Tan0001799 (gene) of Snake gourd v1 genome

Gene IDTan0001799
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionethylene-responsive transcription factor 13-like
Genome locationLG10:450745..451484
RNA-Seq ExpressionTan0001799
SyntenyTan0001799
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048804.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa]7.9e-3056.41Show/hide
Query:  SSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPS-----RRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRP
        SS S   E SSSDLF+LE IRRHLLED+L     G  +  NN  +  ++ + + S          NN++ D           E     RGLQFRGVRRRP
Subjt:  SSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPS-----RRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRP

Query:  WGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS
        WGKYAAEIRDP RKGARIWLGTYHTA++AALAYD AAF+MRGAKAKLNFPH+I+++
Subjt:  WGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS

KAG6597005.1 Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3456.4Show/hide
Query:  SSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRK
        SSS++F+LEWIRRHLLEDELDSV   G N  +  +++ V              DI+   +GSS          +RGLQFRGVRRRPWGKYAAEIRDP RK
Subjt:  SSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRK

Query:  GARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT
        GARIWLGTY TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KRPRT
Subjt:  GARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT

XP_022950239.1 ethylene-responsive transcription factor 1-like [Cucurbita moschata]4.5e-3354.64Show/hide
Query:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK
        MSS S   +  SSS++F+LEWIRRHLLEDELD V   G N  +  +++ V              DI+   +GSS          +RGLQFRGVRRRPWGK
Subjt:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK

Query:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT
        YAAEIRDP RKGARIWLGTY TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KRPRT
Subjt:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]3.4e-3354.64Show/hide
Query:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK
        MSS S   +  SSS++F+LEWIRRHLLEDELDSV   G N  +  + + V              DI+   +GSS          +RGLQFRGVRRRPWGK
Subjt:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK

Query:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT
        YAAEIRDP RKGARIWLGTY TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A P+      + KRPRT
Subjt:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT

XP_023539438.1 ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]1.8e-3454.95Show/hide
Query:  MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKY
        MSS S   + SSS++F+LEWIRRHLLEDELDSV   G N  +  + + V +   P +             GSS          +RGLQFRGVRRRPWGKY
Subjt:  MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKY

Query:  AAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASAS--SSSSSSLLIAPPDHTVGRLNFKRPRT
        AAEIRDP RKGARIWLGTY TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KRPRT
Subjt:  AAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASAS--SSSSSSLLIAPPDHTVGRLNFKRPRT

TrEMBL top hitse value%identityAlignment
A0A0A0L893 AP2/ERF domain-containing protein1.5e-2956.33Show/hide
Query:  MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRR--TRQNNDIDDDDEGSS----SGRREEMMKMMRGLQFRGVRR
        +SS S   E SSSDLF LE IRRHLLED+L     G  +  NN  +  ++ + + S       NN+ +  D+ SS        E+     RGLQFRGVRR
Subjt:  MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRR--TRQNNDIDDDDEGSS----SGRREEMMKMMRGLQFRGVRR

Query:  RPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS
        RPWGKYAAEIRDP +KGARIWLGTYHTA++AALAYD AAF+MRGAKAKLNFPH+I+++
Subjt:  RPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 133.8e-3056.41Show/hide
Query:  SSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPS-----RRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRP
        SS S   E SSSDLF+LE IRRHLLED+L     G  +  NN  +  ++ + + S          NN++ D           E     RGLQFRGVRRRP
Subjt:  SSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPS-----RRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRP

Query:  WGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS
        WGKYAAEIRDP RKGARIWLGTYHTA++AALAYD AAF+MRGAKAKLNFPH+I+++
Subjt:  WGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS

A0A6A3AJ19 Ethylene-responsive transcription factor 134.9e-2573.17Show/hide
Query:  EGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAA
        EG   G RE  +   RG  F+GVRRRPWGKYAAEIRDPKR G+RIWLGTY T E+AALAYD AAFEMRGAKAKLNFPH+I +
Subjt:  EGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAA

A0A6J1GF81 ethylene-responsive transcription factor 1-like2.2e-3354.64Show/hide
Query:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK
        MSS S   +  SSS++F+LEWIRRHLLEDELD V   G N  +  +++ V              DI+   +GSS          +RGLQFRGVRRRPWGK
Subjt:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK

Query:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT
        YAAEIRDP RKGARIWLGTY TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KRPRT
Subjt:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT

A0A6J1IH30 ethylene-responsive transcription factor 13-like1.7e-3354.64Show/hide
Query:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK
        MSS S   +  SSS++F+LEWIRRHLLEDELDSV   G N  +  + + V              DI+   +GSS          +RGLQFRGVRRRPWGK
Subjt:  MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGK

Query:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT
        YAAEIRDP RKGARIWLGTY TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A P+      + KRPRT
Subjt:  YAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI53.1e-2169.74Show/hide
Query:  GLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSL
        G ++RGVRRRPWGKYAAEIRD  R GAR+WLGT+ TAEEAALAYD AAF MRGAKA LNFP  I  ++ S    SL
Subjt:  GLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSL

Q40476 Ethylene-responsive transcription factor 13.7e-2270.59Show/hide
Query:  KMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMI
        ++ RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY T EEAA+AYD AA+ MRG+KA LNFPH I
Subjt:  KMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMI

Q40479 Ethylene-responsive transcription factor 24.8e-2273.85Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMI
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TAEEAALAYD AA+ MRG+KA LNFPH I
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMI

Q8L9K1 Ethylene-responsive transcription factor 133.0e-2473.13Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAA
        +G+Q+RGVRRRPWGK+AAEIRDPK+ GAR+WLGTY T E+AA+AYD AAF++RG+KAKLNFPH+I +
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAA

Q9LW50 Ethylene-responsive transcription factor 24.8e-2273.85Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMI
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TAEEAALAYD AA+ MRG+KA LNFPH I
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMI

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein1.6e-2053.33Show/hide
Query:  DDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS------ASSSSSSSL
        DD+ SS   +E+     R   +RGVR+RPWGK+AAEIRDP  K AR+WLGT+ TAEEAALAYD AAFE RG KAKLNFP  I  +      + ++S   +
Subjt:  DDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS------ASSSSSSSL

Query:  LIAPP
        ++ PP
Subjt:  LIAPP

AT2G33710.2 Integrase-type DNA-binding superfamily protein1.6e-2053.33Show/hide
Query:  DDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS------ASSSSSSSL
        DD+ SS   +E+     R   +RGVR+RPWGK+AAEIRDP  K AR+WLGT+ TAEEAALAYD AAFE RG KAKLNFP  I  +      + ++S   +
Subjt:  DDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS------ASSSSSSSL

Query:  LIAPP
        ++ PP
Subjt:  LIAPP

AT2G44840.1 ethylene-responsive element binding factor 132.2e-2573.13Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAA
        +G+Q+RGVRRRPWGK+AAEIRDPK+ GAR+WLGTY T E+AA+AYD AAF++RG+KAKLNFPH+I +
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAA

AT4G17500.1 ethylene responsive element binding factor 15.5e-2170.97Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFP
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGT+ TAE+AALAYD AAF MRG++A LNFP
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFP

AT5G47220.1 ethylene responsive element binding factor 27.2e-2151.92Show/hide
Query:  MRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNF----------PHMIAASASSSSSSSLLIAPPDHTVGRL
        ++   +RGVR+RPWGK+AAEIRDP + GAR+WLGT+ TAE+AALAYD AAF MRG++A LNF          P  I +  SSSSSSS   +      G+L
Subjt:  MRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNF----------PHMIAASASSSSSSSLLIAPPDHTVGRL

Query:  NFKR
          +R
Subjt:  NFKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCTTGAGCAGGAAGAGGGAAGAGTCGTCGTCGGATTTGTTTGTGCTGGAGTGGATTCGGCGGCATCTTCTGGAAGACGAATTGGATTCGGTTGCGGTTGGAGG
GAATAATAATAAGAATAATGACAACAATAATAATGTTAAGGAGGAGGCAAACCCGTCAAGGCGGACGAGGCAGAATAATGATATTGATGATGATGATGAGGGCAGCAGCA
GCGGCAGGAGGGAGGAGATGATGAAGATGATGAGAGGGCTTCAGTTCAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGATCCGAAGAGAAAA
GGAGCTCGAATATGGCTGGGAACGTACCACACTGCCGAAGAGGCTGCTTTAGCTTATGATGGAGCTGCTTTTGAGATGCGAGGAGCCAAAGCAAAGCTCAACTTTCCTCA
TATGATTGCTGCTTCTGCGTCTTCTTCTTCCTCTTCTTCCCTCCTCATAGCCCCGCCTGATCATACTGTTGGCCGCCTCAACTTCAAGCGCCCTAGAACTACCAATTAA
mRNA sequenceShow/hide mRNA sequence
GTTATAAGAAAAATAATTAATATATTATGTCGAGCTTGAGCAGGAAGAGGGAAGAGTCGTCGTCGGATTTGTTTGTGCTGGAGTGGATTCGGCGGCATCTTCTGGAAGAC
GAATTGGATTCGGTTGCGGTTGGAGGGAATAATAATAAGAATAATGACAACAATAATAATGTTAAGGAGGAGGCAAACCCGTCAAGGCGGACGAGGCAGAATAATGATAT
TGATGATGATGATGAGGGCAGCAGCAGCGGCAGGAGGGAGGAGATGATGAAGATGATGAGAGGGCTTCAGTTCAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTACGCAG
CAGAGATCAGAGATCCGAAGAGAAAAGGAGCTCGAATATGGCTGGGAACGTACCACACTGCCGAAGAGGCTGCTTTAGCTTATGATGGAGCTGCTTTTGAGATGCGAGGA
GCCAAAGCAAAGCTCAACTTTCCTCATATGATTGCTGCTTCTGCGTCTTCTTCTTCCTCTTCTTCCCTCCTCATAGCCCCGCCTGATCATACTGTTGGCCGCCTCAACTT
CAAGCGCCCTAGAACTACCAATTAATTAATTAATACACTACTTCTCCTCATACTCTCATCACTCATAACACGCCCGGCCCCATTCTTATTCACCTCTTCTATATATGTCC
TTAAATTCTTCACCACCATTCCCCTTACCAATTTACTATATATTACAAATATCAACCAACAATATTATATAATAATATAA
Protein sequenceShow/hide protein sequence
MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRK
GARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLLIAPPDHTVGRLNFKRPRTTN