; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001903 (gene) of Snake gourd v1 genome

Gene IDTan0001903
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:6019863..6020278
RNA-Seq ExpressionTan0001903
SyntenyTan0001903
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025124.1 hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa]5.0e-4479.69Show/hide
Query:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM------GRGGGGFAPATVSVEQRLALV
        MI+GKQ VSP G FRRLFRARCRK+A++N LLEAIAKASREGTG VS  EE+GVVRIKM+VKKTDLAQ LEAM      G GGGG A A+VS+EQRLA+V
Subjt:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM------GRGGGGFAPATVSVEQRLALV

Query:  RRKQLLRAKLAAATWSPALQSIPEEIDS
        RRKQLLRAKLAAATWSPALQSIPEEIDS
Subjt:  RRKQLLRAKLAAATWSPALQSIPEEIDS

KAG6572129.1 hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4281.67Show/hide
Query:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM--GRGGGGFAPATVSVEQRLALVRRKQ
        MIDGKQ  SP GAFRRLFRAR RKNA+++NLLEAIAK SREGTG VSQ EEDGVVRIKM+VKKTDLAQ LEA+  G GGGG APA+VSVE RLA++RRKQ
Subjt:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM--GRGGGGFAPATVSVEQRLALVRRKQ

Query:  LLRAKLAAATWSPALQSIPE
         LRAKLAAATWSPALQSIPE
Subjt:  LLRAKLAAATWSPALQSIPE

KGN43274.1 hypothetical protein Csa_020212 [Cucumis sativus]4.0e-4176Show/hide
Query:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGG---FAPATVSVEQRLALVRRK
        MI+GKQ  SP G FRRLFRARCRK+A++N LLEAIAKASREG G VS  EE+GVVRIKM+VKKTDL Q LEAMG G GG    APA+VS+E RL ++RRK
Subjt:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGG---FAPATVSVEQRLALVRRK

Query:  QLLRAKLAAATWSPALQSIPEEIDS
        Q LRAKLAAATWSPALQSIPEEIDS
Subjt:  QLLRAKLAAATWSPALQSIPEEIDS

OAY52280.1 hypothetical protein MANES_04G070500v8 [Manihot esculenta]4.9e-1552.5Show/hide
Query:  SPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAP----ATVSVEQRLALVRRKQLLRAKL
        SPK   R L RAR  ++ R NNLLE+IA+A+  G   VSQ+ EDGVVR+K+LV+K DL Q LE M   G   +     +++SVEQRL L+R+KQLLRA  
Subjt:  SPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAP----ATVSVEQRLALVRRKQLLRAKL

Query:  AA-----ATWSPALQSIPEE
        AA      +W+P LQSIPEE
Subjt:  AA-----ATWSPALQSIPEE

XP_023511743.1 uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]2.7e-4583.87Show/hide
Query:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM--GRGGGGFAPATVSVEQRLALVRRKQ
        MIDGKQ  SP GAFRRLFRAR RKNA+++NLLEAIAK SREGTG VSQ EEDGVVRIKM+VKKTDLAQ LEAM  G GGGG APA+VSVEQRLA++RRKQ
Subjt:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM--GRGGGGFAPATVSVEQRLALVRRKQ

Query:  LLRAKLAAATWSPALQSIPEEIDS
         LRAKLAAATWSPALQSIPEEIDS
Subjt:  LLRAKLAAATWSPALQSIPEEIDS

TrEMBL top hitse value%identityAlignment
A0A0A0K2L8 Uncharacterized protein1.9e-4176Show/hide
Query:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGG---FAPATVSVEQRLALVRRK
        MI+GKQ  SP G FRRLFRARCRK+A++N LLEAIAKASREG G VS  EE+GVVRIKM+VKKTDL Q LEAMG G GG    APA+VS+E RL ++RRK
Subjt:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGG---FAPATVSVEQRLALVRRK

Query:  QLLRAKLAAATWSPALQSIPEEIDS
        Q LRAKLAAATWSPALQSIPEEIDS
Subjt:  QLLRAKLAAATWSPALQSIPEEIDS

A0A2C9W2T4 Uncharacterized protein2.4e-1552.5Show/hide
Query:  SPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAP----ATVSVEQRLALVRRKQLLRAKL
        SPK   R L RAR  ++ R NNLLE+IA+A+  G   VSQ+ EDGVVR+K+LV+K DL Q LE M   G   +     +++SVEQRL L+R+KQLLRA  
Subjt:  SPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAP----ATVSVEQRLALVRRKQLLRAKL

Query:  AA-----ATWSPALQSIPEE
        AA      +W+P LQSIPEE
Subjt:  AA-----ATWSPALQSIPEE

A0A5A7SHL7 Uncharacterized protein2.4e-4479.69Show/hide
Query:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM------GRGGGGFAPATVSVEQRLALV
        MI+GKQ VSP G FRRLFRARCRK+A++N LLEAIAKASREGTG VS  EE+GVVRIKM+VKKTDLAQ LEAM      G GGGG A A+VS+EQRLA+V
Subjt:  MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAM------GRGGGGFAPATVSVEQRLALV

Query:  RRKQLLRAKLAAATWSPALQSIPEEIDS
        RRKQLLRAKLAAATWSPALQSIPEEIDS
Subjt:  RRKQLLRAKLAAATWSPALQSIPEEIDS

A0A6J5VPM4 Uncharacterized protein5.3e-1550.79Show/hide
Query:  RRLFR-ARCRKNAR-----SNNLLEAIAKAS---REGTGSVS-QIEEDGVVRIKMLVKKTDLAQFLEAMGRGG-----GGFAPATVSVEQRLALVRRKQL
        R LFR  R R N +     SN L+EAIAK +   +EGT  +S Q +EDGVVR+K+LV++ DL Q LE M  GG         P+++ VEQRL+L+R+K L
Subjt:  RRLFR-ARCRKNAR-----SNNLLEAIAKAS---REGTGSVS-QIEEDGVVRIKMLVKKTDLAQFLEAMGRGG-----GGFAPATVSVEQRLALVRRKQL

Query:  LRAKLAA-----ATWSPALQSIPEEI
        LRA LAA      +W PALQSIPEEI
Subjt:  LRAKLAA-----ATWSPALQSIPEEI

A0A7N2N056 Uncharacterized protein2.5e-1749.6Show/hide
Query:  VSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAPA--------TVSVEQRLALVRRKQL
        V+PK  FR+ FRA+ +KN+RS ++LE +   +  G G VS IE+DGVVR+K++VKK DL Q LE MG GGGG + A        ++S EQRL L+++K +
Subjt:  VSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAPA--------TVSVEQRLALVRRKQL

Query:  LRA----KLAAATWSPALQSIPEEI
        LRA    + ++++WSPALQSIPEE+
Subjt:  LRA----KLAAATWSPALQSIPEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGACGGTAAGCAGTTTGTGTCGCCGAAAGGAGCTTTCCGGCGACTTTTCAGAGCTCGGTGCCGGAAAAATGCCAGATCCAATAATCTGCTGGAAGCCATTGCCAA
AGCAAGCAGAGAAGGAACTGGTTCTGTTTCTCAGATCGAAGAAGACGGAGTCGTACGGATTAAAATGTTGGTGAAGAAGACAGATTTGGCTCAATTTCTCGAAGCCATGG
GCCGCGGCGGTGGCGGATTTGCTCCGGCGACGGTCTCCGTCGAACAGCGGTTGGCTCTTGTGAGACGAAAGCAACTTCTCCGAGCGAAACTAGCGGCGGCGACTTGGAGT
CCGGCGCTGCAGAGCATTCCTGAAGAGATCGATTCGATCTGA
mRNA sequenceShow/hide mRNA sequence
CACCGATTCCAATCCCGTCCAGTTTCAACCGAAACCCGAACATTATGATCGACGGTAAGCAGTTTGTGTCGCCGAAAGGAGCTTTCCGGCGACTTTTCAGAGCTCGGTGC
CGGAAAAATGCCAGATCCAATAATCTGCTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTCTGTTTCTCAGATCGAAGAAGACGGAGTCGTACGGATTAAAAT
GTTGGTGAAGAAGACAGATTTGGCTCAATTTCTCGAAGCCATGGGCCGCGGCGGTGGCGGATTTGCTCCGGCGACGGTCTCCGTCGAACAGCGGTTGGCTCTTGTGAGAC
GAAAGCAACTTCTCCGAGCGAAACTAGCGGCGGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCTGAAGAGATCGATTCGATCTGA
Protein sequenceShow/hide protein sequence
MIDGKQFVSPKGAFRRLFRARCRKNARSNNLLEAIAKASREGTGSVSQIEEDGVVRIKMLVKKTDLAQFLEAMGRGGGGFAPATVSVEQRLALVRRKQLLRAKLAAATWS
PALQSIPEEIDSI