; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001905 (gene) of Snake gourd v1 genome

Gene IDTan0001905
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionselenoprotein F-like
Genome locationLG06:22118353..22122556
RNA-Seq ExpressionTan0001905
SyntenyTan0001905
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575383.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]3.7e-8293.53Show/hide
Query:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL
        MQLLTGVK PAT+VTMA  AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGA+LEVCMRKL
Subjt:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL

Query:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKV-KRSSAI
        VFYPEIVGFIEEEKDQFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKV +RSSAI
Subjt:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKV-KRSSAI

KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]8.3e-8291.81Show/hide
Query:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL T VK+PATVV MA   AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI

XP_022954272.1 selenoprotein F-like [Cucurbita moschata]1.3e-8294.12Show/hide
Query:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL
        MQLLTGVK PAT+VTMA  AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGA+LEVCMRKL
Subjt:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL

Query:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVK-RSSAI
        VFYPEIVGFIEEEKDQFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVK-RSSAI

XP_023004122.1 selenoprotein F-like [Cucurbita maxima]6.4e-8292.4Show/hide
Query:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   VKKPATVV MA   AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]8.0e-8594.74Show/hide
Query:  MQLLTGVKKPATVVTMAVAA--IIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLL GV+ PAT VTMAVAA  +IFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLTGVKKPATVVTMAVAA--IIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI
        KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A1S3CC00 15 kDa selenoprotein1.5e-8191.23Show/hide
Query:  MQLLTGVKKPAT--VVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLL GV  PAT   VT+A AAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLTGVKKPAT--VVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI
        KLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFL+EKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI

A0A6J1GQK6 selenoprotein F-like6.2e-8394.12Show/hide
Query:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL
        MQLLTGVK PAT+VTMA  AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGA+LEVCMRKL
Subjt:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL

Query:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVK-RSSAI
        VFYPEIVGFIEEEKDQFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVK-RSSAI

A0A6J1HA08 selenoprotein F-like9.0e-8291.23Show/hide
Query:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   VKKPATVV MA   AAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI

A0A6J1JXH9 selenoprotein F-like6.9e-8293.53Show/hide
Query:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL
        MQLLTGVK PAT+VTMA  AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGA+LEVCMRKL
Subjt:  MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKL

Query:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVK-RSSAI
        VFYPEIVGFIEEEK QFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  VFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVK-RSSAI

A0A6J1KPJ2 selenoprotein F-like3.1e-8292.4Show/hide
Query:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   VKKPATVV MA   AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLTGVKKPATVVTMA--VAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F1.8e-1837.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR

A8YXY3 Selenoprotein F4.7e-1937.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR

O60613 Selenoprotein F7.9e-1937.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR

Q802F3 Selenoprotein F1.8e-1837.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR

Q923V8 Selenoprotein F2.0e-1736.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLREKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein3.6e-6772.67Show/hide
Query:  KKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIV
        ++ A +V ++   I+ +AS   A  KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELVSDCLKCC +DS+D+ SK+TYSGA+LEVCMRKLVFYPEIV
Subjt:  KKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIV

Query:  GFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSA
        GFIEEEK++FPSVKVQYIFNSPPKLI+LD++G+HKESIRIDNWKREH+LQ++REKVK ++A
Subjt:  GFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTCTCACCGGTGTAAAGAAGCCGGCTACGGTGGTGACGATGGCGGTAGCGGCGATAATTTTCATCGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTCAG
CTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTCGCTCTCTGTTCTGATTGTCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTATCAGACTGTTTGAAGT
GTTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTACTGGAAGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATT
GAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGACGATGAAGGCCAACATAAAGAAAGCATCAGGAT
TGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCGAGAGAAGGTTAAGCGTTCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
CGTCAAAGTAACGAAAAATGATATTTCTCCCAATTCGAAGTTTAGAATTGGTCTTTTCCAGTGAGAGTTCTCTGATCGTCTCTAGACTCTTCTTCACCTACAGTCGACGG
CGGACACAGAGATGCAGCTTCTCACCGGTGTAAAGAAGCCGGCTACGGTGGTGACGATGGCGGTAGCGGCGATAATTTTCATCGCGTCAATGCCGTTGGCTTGGTCAAAG
GAGCAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTCGCTCTCTGTTCTGATTGTCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTATCAGA
CTGTTTGAAGTGTTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTACTGGAAGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTG
TTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGACGATGAAGGCCAACATAAAGAA
AGCATCAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCGAGAGAAGGTTAAGCGTTCTTCAGCAATTTAAGGTTCTCTCTTTTTATTAAAAAAAAAAAA
AATCTCTGTAAAAAACTTGATGCAGAAGTCGAACGAAACAATTATCAACCTAAAAACTTGAGGTGAACATTAATTTTGTCAATTTGAAAGATAGTTGGAAAGATAACTGA
TTTACTTGTCTAAA
Protein sequenceShow/hide protein sequence
MQLLTGVKKPATVVTMAVAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFI
EEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLREKVKRSSAI