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Tan0001949 (gene) of Snake gourd v1 genome

Gene IDTan0001949
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:73439582..73440353
RNA-Seq ExpressionTan0001949
SyntenyTan0001949
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8090643.1 hypothetical protein EE612_015901, partial [Oryza sativa]1.6e-0945.3Show/hide
Query:  GTGTGV-ARF-----RLRDDGVDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDG-----VGAVRWDFDGVFDVGEAELGFVERVGG
        G G GV AR       ++ DGVDAG LLEE++ + GD+  A GR RA ++V PD  A  A    +DDG     VG    D D V DV E  LG   RVGG
Subjt:  GTGTGV-ARF-----RLRDDGVDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDG-----VGAVRWDFDGVFDVGEAELGFVERVGG

Query:  AAEDGGGVGETTLHDEP
          ED   V +  LHDEP
Subjt:  AAEDGGGVGETTLHDEP

KAG6588614.1 hypothetical protein SDJN03_17179, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2467.03Show/hide
Query:  VDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDGVGAVRWDFDGVFDVGEAELGFVERVGGAAEDGGGVGETTLHDEP
        VDAG LLEE+D DG DQD+AD RC A +E+LPD FA TA+F EMDD VGA+  D   +FDVGEAELGFV  VGG  E+G GVGE  LHDEP
Subjt:  VDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDGVGAVRWDFDGVFDVGEAELGFVERVGGAAEDGGGVGETTLHDEP

TrEMBL top hitse value%identityAlignment
A0A0P0VUA0 Os03g0197175 protein (Fragment)7.6e-1045.3Show/hide
Query:  GTGTGV-ARF-----RLRDDGVDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDG-----VGAVRWDFDGVFDVGEAELGFVERVGG
        G G GV AR       ++ DGVDAG LLEE++ + GD+  A GR RA ++V PD  A  A    +DDG     VG    D D V DV E  LG   RVGG
Subjt:  GTGTGV-ARF-----RLRDDGVDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDG-----VGAVRWDFDGVFDVGEAELGFVERVGG

Query:  AAEDGGGVGETTLHDEP
          ED   V +  LHDEP
Subjt:  AAEDGGGVGETTLHDEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTACGAACATTCTTAGGCAAAAGATTCGACTGGAGGCTGAGCAACGAGTTCCAACACTTTATAAAATTGTCGATTCTTTGAGGCAATTGAAACAAGTTGGGACTGG
AACTGGTGTCGCAAGATTTCGACTTCGAGACGACGGCGTCGATGCCGGAAGCTTGCTGGAAGAAATGGATGTCGATGGCGGAGATCAGGATGTGGCGGACGGACGATGTC
GGGCGAATAAAGAGGTCCTTCCAGACGCCTTTGCGACTACGGCATCGTTTCGGGAGATGGATGACGGTGTTGGTGCAGTCAGGTGGGATTTCGACGGCGTGTTTGATGTT
GGCGAGGCGGAGTTGGGCTTCGTCGAGAGAGTCGGAGGTGCGGCGGAGGACGGCGGTGGCGTCGGCGAGACGACCTTGCATGACGAGCCAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTACGAACATTCTTAGGCAAAAGATTCGACTGGAGGCTGAGCAACGAGTTCCAACACTTTATAAAATTGTCGATTCTTTGAGGCAATTGAAACAAGTTGGGACTGG
AACTGGTGTCGCAAGATTTCGACTTCGAGACGACGGCGTCGATGCCGGAAGCTTGCTGGAAGAAATGGATGTCGATGGCGGAGATCAGGATGTGGCGGACGGACGATGTC
GGGCGAATAAAGAGGTCCTTCCAGACGCCTTTGCGACTACGGCATCGTTTCGGGAGATGGATGACGGTGTTGGTGCAGTCAGGTGGGATTTCGACGGCGTGTTTGATGTT
GGCGAGGCGGAGTTGGGCTTCGTCGAGAGAGTCGGAGGTGCGGCGGAGGACGGCGGTGGCGTCGGCGAGACGACCTTGCATGACGAGCCAATATGA
Protein sequenceShow/hide protein sequence
MGTNILRQKIRLEAEQRVPTLYKIVDSLRQLKQVGTGTGVARFRLRDDGVDAGSLLEEMDVDGGDQDVADGRCRANKEVLPDAFATTASFREMDDGVGAVRWDFDGVFDV
GEAELGFVERVGGAAEDGGGVGETTLHDEPI