; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0001964 (gene) of Snake gourd v1 genome

Gene IDTan0001964
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal protein S7
Genome locationContig00124:82552..82996
RNA-Seq ExpressionTan0001964
SyntenyTan0001964
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHD19691.1 ribosomal protein S7 [Hemiptelea davidii]4.3e-6589.86Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             N+HRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

WP_131796637.1 30S ribosomal protein S7 [Candidatus Frankia datiscae]4.3e-6589.86Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLH+LASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

XP_023521058.1 uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]4.3e-6589.86Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

YP_009241662.1 ribosomal protein S7 [Ziziphus jujuba]1.1e-6591.22Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

YP_009243658.1 ribosomal protein S7 [Cannabis sativa]4.3e-6590.54Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNR FAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

TrEMBL top hitse value%identityAlignment
A0A0M4R6T5 Ribosomal protein S72.1e-6590.54Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNR FAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

A0A142BZ01 Ribosomal protein S75.5e-6691.22Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

A0A411GRV8 Ribosomal protein S75.5e-6691.22Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

A0A6B9MKJ0 Ribosomal protein S72.1e-6589.86Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             N+HRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

A0A7D6C7C9 Ribosomal protein S75.5e-6691.22Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLHRLASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

SwissProt top hitse value%identityAlignment
A1WVC6 30S ribosomal protein S72.3e-1637.78Show/hide
Query:  QLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRIS
        +++ K VN  M +GKR+    I+Y    R      D I++M  A+EN+KP  EV+   V G  Y VP  V  +R+QTLA+RW+LEAA KR    ++ R++
Subjt:  QLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRIS

Query:  LEKCSFAEI-------LDNLHRLASTNRSFAHFRW
         E    AE         ++ HR+A  N++F+H+RW
Subjt:  LEKCSFAEI-------LDNLHRLASTNRSFAHFRW

P26867 Ribosomal protein S7, mitochondrial4.7e-3857.82Show/hide
Query:  GLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRIS
        GL+G+QKQLIKKLV+  M +GK+TR RAIVY+TFHR A    DVIKL+V+A+EN+KPICEV+KV ++GT   VP I+A +RQ+TLAIRW+LE+A KRR+ 
Subjt:  GLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRIS

Query:  YR-ISLEKCSFAEIL-------------DNLHRLASTNRSFAHFRWW
         + ISL++C +AEIL             D+LH+LA  NRSF+H+RWW
Subjt:  YR-ISLEKCSFAEIL-------------DNLHRLASTNRSFAHFRWW

P92557 Ribosomal protein S7, mitochondrial9.0e-6688.51Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAVENIKPICEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLH LASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

Q01902 Ribosomal protein S7, mitochondrial8.8e-6183.11Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MG  DGEQK+LIKKLVNFRM +GKRTRVRAIVY+TFHR A+TERDVIKLMVDAV+NIKPICEV KVGVAGTIYDVPGIVARDRQQTLAIRWIL AAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLH LASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

Q9MF82 Ribosomal protein S7, mitochondrial3.3e-6082.43Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLD EQKQLIKKLVNF MKEGKRT+VRAIVYQTFHR A+TE DVIKLM+DAVENIKPIC+VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKC F EILD             NLH LAS NRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein6.4e-6788.51Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAVENIKPICEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLH LASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW

ATCG00900.1 Ribosomal protein S7p/S5e family protein3.2e-1029.93Show/hide
Query:  QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISY
        + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+   V G+ + VP  +   + + LAIRW+L A+ K   R +++
Subjt:  QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISY

Query:  RISLEKCSFAE-------ILDNLHRLASTNRSFAHFR
        ++S E    A+         +  HR+A  NR+FAHFR
Subjt:  RISLEKCSFAE-------ILDNLHRLASTNRSFAHFR

ATCG01240.1 ribosomal protein S73.2e-1029.93Show/hide
Query:  QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISY
        + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+   V G+ + VP  +   + + LAIRW+L A+ K   R +++
Subjt:  QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISY

Query:  RISLEKCSFAE-------ILDNLHRLASTNRSFAHFR
        ++S E    A+         +  HR+A  NR+FAHFR
Subjt:  RISLEKCSFAE-------ILDNLHRLASTNRSFAHFR

ATMG01270.1 mitochondrial ribosomal protein S76.4e-6788.51Show/hide
Query:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
        MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAVENIKPICEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR
Subjt:  MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRR

Query:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW
        ISYRISLEKCSFAEILD             NLH LASTNRSFAHFRWW
Subjt:  ISYRISLEKCSFAEILD-------------NLHRLASTNRSFAHFRWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCA
TCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATG
ATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGT
TCATTTGCTGAGATACTGGATAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCA
TCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATG
ATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGT
TCATTTGCTGAGATACTGGATAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA
Protein sequenceShow/hide protein sequence
MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC
SFAEILDNLHRLASTNRSFAHFRWW