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Tan0002001 (gene) of Snake gourd v1 genome

Gene IDTan0002001
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:15341650..15342985
RNA-Seq ExpressionTan0002001
SyntenyTan0002001
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600897.1 hypothetical protein SDJN03_06130, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6080.38Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKSLPSAT LQQFAK+ V SKKPQS  P   S+IRVSP ETPI DTVRV+SEP   KK ME+KNR+PLADVVSDCVKRWFQDTLKEA+ GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        QMFCSGYGVPKDT+KGLAWINRA+K QASV +VSDRHPGYL TDSE S+RR+KQDDIR
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

KAG7030637.1 hypothetical protein SDJN02_04674 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-6284.21Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKS P A+RLQQFAKVVVSSKKPQSP      KIRVSPPETPISD+VRV+SEP +PKK ME KNRIPLADVVSDC KRWFQDTLKEAN GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRL
        QMFCSGYGVPKDT+KGLAWINRA+K QASVWK SDRHP YL TDSESSDRRL
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRL

XP_022941871.1 uncharacterized protein LOC111447103 [Cucurbita moschata]3.8e-6583.54Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKS P A+RLQQFAKVVVSSKKPQSP      KIRVSPPETPISD+VRV+SEP +PKK ME KNRIPLADVVSDC KRWFQDTLKEAN GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        QMFCSGYGVPKDT+KGLAWINRA+K QASVWK SDRHP YL TDSESSDRR+K+DDIR
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

XP_022996650.1 uncharacterized protein LOC111491826 [Cucurbita maxima]1.4e-6284.31Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKSLP A+RLQQFAKVVVSSKKPQSP P    KIRVSPPETPISD+VRV+SEP +PKK ME KNRIPLADVVSDC KRWFQDTLKEAN GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLK
        QMFCSGYGVPKDT+KGLAWI+RA+K QASV K SDRHPGYL TDSESSDRR+K
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLK

XP_023552657.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo]1.3e-6584.18Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKSLP A+RLQQFAKVVVSSKKPQSP      KIRVSPPETPISD+VRV+SEP +PKK ME KNRIPLADVVSDC KRWFQDTLKEAN GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        QMFCSGYGVPKDT+KGLAWINRA+K QASVWK SDRHP YL TDSESSDRR+K+DDIR
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

TrEMBL top hitse value%identityAlignment
A0A0A0KM25 Uncharacterized protein1.6e-5675.8Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQS-PIPSKIRVSPPETPISDTVRVVSEPTKPKKI-MEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQ
        MAKSLPS  R QQFAK+V SSK PQS P  S+IR SP ETPIS +VRV+SEP K K +  E+KNR PLADVVSDCVKRWFQDTLKEA  GD +MQVLVGQ
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQS-PIPSKIRVSPPETPISDTVRVVSEPTKPKKI-MEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQ

Query:  MFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        MFCSGYGVPK+T+KGLAWI RA+K QASVWK SDRHPGYL TDSESSDRR+K+D++R
Subjt:  MFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

A0A6J1FNN7 uncharacterized protein LOC1114471031.8e-6583.54Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKS P A+RLQQFAKVVVSSKKPQSP      KIRVSPPETPISD+VRV+SEP +PKK ME KNRIPLADVVSDC KRWFQDTLKEAN GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPI---PSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        QMFCSGYGVPKDT+KGLAWINRA+K QASVWK SDRHP YL TDSESSDRR+K+DDIR
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

A0A6J1GZI5 uncharacterized protein LOC1114589313.0e-6079.75Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKSLPSAT LQQFAK+ V SKKPQS  P   S+IRVSP ETPI DTVRV+SEP   KK ME+KNR+PLADVVSDCVKRWFQDTLKEA+ GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        QMFCSGYGVPKDT+KGLAWINRA+K QA V +VSDRHPGYL TDSE S+RR+KQDDIR
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

A0A6J1JUC7 uncharacterized protein LOC1114884392.6e-5978.48Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKSLPSA+ LQQFAK+ V SKKPQS  P   S+IRVSP ETPI DTVRV+SEP   KK ME++NR+PLADVVSDCVKRWFQDTLKEA+ GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR
        QMFCSGYGVPKDT+KGLAWINRA+K QA V +VSDRHPGYL TDSE S+RR+KQDDIR
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR

A0A6J1K2L5 uncharacterized protein LOC1114918266.5e-6384.31Show/hide
Query:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        MAKSLP A+RLQQFAKVVVSSKKPQSP P    KIRVSPPETPISD+VRV+SEP +PKK ME KNRIPLADVVSDC KRWFQDTLKEAN GD AMQVLVG
Subjt:  MAKSLPSATRLQQFAKVVVSSKKPQSPIP---SKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLK
        QMFCSGYGVPKDT+KGLAWI+RA+K QASV K SDRHPGYL TDSESSDRR+K
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)4.8e-2644.9Show/hide
Query:  MAKSLPSATRLQQFAKVV---VSSKKPQSPIPSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG
        M KS+P  T L+  +  V   + S KP  PI S           S +    SE T        +  +PL+ VVSDC KRWF+DTL+EA  G+  MQVL+G
Subjt:  MAKSLPSATRLQQFAKVV---VSSKKPQSPIPSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVG

Query:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSES
        QM+ SGYGVPKD +KG  WI +A++ ++SVWKV D+ PGY  +DS+S
Subjt:  QMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSES

AT5G05360.1 unknown protein1.6e-3265.52Show/hide
Query:  NRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRR
        NR+PLA VV DCV+RWFQDTLKEA  GD  MQVLVGQM+CSGYG+PKD  KG AWIN+A++ ++S W+VSD+ PGY  +DS+S+D++
Subjt:  NRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRR

AT5G05360.2 unknown protein6.1e-2969.33Show/hide
Query:  NRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPG
        NR+PLA VV DCV+RWFQDTLKEA  GD  MQVLVGQM+CSGYG+PKD  KG AWIN+A++ ++S W+VSD+ PG
Subjt:  NRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQMFCSGYGVPKDTQKGLAWINRATKNQASVWKVSDRHPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATCGCTTCCATCAGCGACTCGCCTCCAACAATTCGCCAAGGTTGTCGTCTCCTCCAAAAAGCCCCAATCTCCGATACCGTCCAAGATCCGAGTTTCCCCGCC
CGAAACTCCGATCTCCGATACCGTCCGAGTCGTCTCGGAACCGACGAAGCCGAAGAAGATCATGGAGAAGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACTGCG
TCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAACGACGGCGATAAGGCGATGCAGGTCTTGGTAGGGCAGATGTTTTGTTCCGGCTATGGAGTTCCTAAGGACACT
CAGAAGGGGCTTGCTTGGATCAATCGAGCTACGAAAAATCAGGCATCAGTTTGGAAAGTAAGCGATAGACATCCAGGTTACTTGGGGACTGATTCAGAGTCAAGCGATAG
GAGACTAAAACAAGATGATATCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAATCGCTTCCATCAGCGACTCGCCTCCAACAATTCGCCAAGGTTGTCGTCTCCTCCAAAAAGCCCCAATCTCCGATACCGTCCAAGATCCGAGTTTCCCCGCC
CGAAACTCCGATCTCCGATACCGTCCGAGTCGTCTCGGAACCGACGAAGCCGAAGAAGATCATGGAGAAGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACTGCG
TCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAACGACGGCGATAAGGCGATGCAGGTCTTGGTAGGGCAGATGTTTTGTTCCGGCTATGGAGTTCCTAAGGACACT
CAGAAGGGGCTTGCTTGGATCAATCGAGCTACGAAAAATCAGGCATCAGTTTGGAAAGTAAGCGATAGACATCCAGGTTACTTGGGGACTGATTCAGAGTCAAGCGATAG
GAGACTAAAACAAGATGATATCAGATAA
Protein sequenceShow/hide protein sequence
MAKSLPSATRLQQFAKVVVSSKKPQSPIPSKIRVSPPETPISDTVRVVSEPTKPKKIMEKKNRIPLADVVSDCVKRWFQDTLKEANDGDKAMQVLVGQMFCSGYGVPKDT
QKGLAWINRATKNQASVWKVSDRHPGYLGTDSESSDRRLKQDDIR