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Tan0002003 (gene) of Snake gourd v1 genome

Gene IDTan0002003
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCopper amine oxidase family protein
Genome locationLG01:105799003..105801034
RNA-Seq ExpressionTan0002003
SyntenyTan0002003
Gene Ontology termsGO:0048364 - root development (biological process)
GO:0050789 - regulation of biological process (biological process)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB9571943.1 hypothetical protein FH972_027045 [Carpinus fangiana]4.5e-0946.43Show/hide
Query:  AHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        AHRS  L    ++ L++   +F SV  +RP            + P  P ++SFS+N YK +E DAFRPT+PGHSPGVGH+DPPA
Subjt:  AHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
KAF3968462.1 hypothetical protein CMV_007653 [Castanea mollissima]2.3e-0848.28Show/hide
Query:  MAHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPG--NRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        MA R+  L  F +I L+    +F S+  SRP  T+  P     +  SP AP ++SF+IN YK VE  A+RPT+PGHSPGVGH  PPA
Subjt:  MAHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPG--NRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
KAG6591857.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]8.5e-1661.7Show/hide
Query:  AHRSL-YLNLFALITLIIFLLHFLSVTSRPL----------ATVAGPGNRHAISPPAPVS-MSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
        A RSL ++NL  LITL   LLH LSVTSRPL          A      + HAI PPAPVS ++FSIN YKYVE DAFRPT+PGHSPGVGH DPP
Subjt:  AHRSL-YLNLFALITLIIFLLHFLSVTSRPL----------ATVAGPGNRHAISPPAPVS-MSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
KAG6608019.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2070.73Show/hide
Query:  LNLFALITLIIFLLHFLSVTSRPL------ATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
        L  F L+ L++FLL+FLSVTSRP       A V G GNRHAI+PPA +S +FSIN YKYVEMDAFRPTSPGHSPGVGHKDPP
Subjt:  LNLFALITLIIFLLHFLSVTSRPL------ATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
XP_022738733.1 precursor of CEP12 [Durio zibethinus]1.1e-0748.91Show/hide
Query:  MAHRSLYLNLFALITLIIFLL---HF-LSVTSRPLATVAGPGNRHAISPPAPVSMS----FSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        MAH +   N+F L +L +FLL   HF L   SR LA  A P  +  +S P P S++    F+IN +K +E +AFRPTSPGHSPGVGH  PP+
Subjt:  MAHRSLYLNLFALITLIIFLL---HF-LSVTSRPLATVAGPGNRHAISPPAPVSMS----FSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
TrEMBL top hitse value%identityAlignment
A0A0A0KWX0 Uncharacterized protein2.6e-1866.29Show/hide
Query:  MAHRSLYLNLF---ALITLIIFLLHFLSVT-SRPLATVAGPGNRHAISPPAPVSM--SFSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
        MAHRSL+LN F     + L++ LLH L VT SRPL  +  P N HAI+PPAPVS+  SFSIN YKYVE DAFRPTSPGHSPGVGH +PP
Subjt:  MAHRSLYLNLF---ALITLIIFLLHFLSVT-SRPLATVAGPGNRHAISPPAPVSM--SFSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
A0A5N6L638 Uncharacterized protein2.2e-0946.43Show/hide
Query:  AHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        AHRS  L    ++ L++   +F SV  +RP            + P  P ++SFS+N YK +E DAFRPT+PGHSPGVGH+DPPA
Subjt:  AHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
A0A6P5YE41 precursor of CEP125.4e-0848.91Show/hide
Query:  MAHRSLYLNLFALITLIIFLL---HF-LSVTSRPLATVAGPGNRHAISPPAPVSMS----FSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        MAH +   N+F L +L +FLL   HF L   SR LA  A P  +  +S P P S++    F+IN +K +E +AFRPTSPGHSPGVGH  PP+
Subjt:  MAHRSLYLNLFALITLIIFLL---HF-LSVTSRPLATVAGPGNRHAISPPAPVSMS----FSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
A0A7N2N0V5 Uncharacterized protein1.4e-0847.13Show/hide
Query:  MAHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPG--NRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        MA R+  L    L+ +++   +F S+  SRP  T+  P     +  SP AP ++SF+IN YK VE +AFRPT+PGHSPGVGH  PPA
Subjt:  MAHRSLYLNLFALITLIIFLLHFLSV-TSRPLATVAGPG--NRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
W9S854 Uncharacterized protein7.1e-0844.32Show/hide
Query:  AHRSLYLNLFALITLIIFLLHFLSVTSRPLATVAGP-----GNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
        A R+  L+L+  + L++  + F S +SRPL  V  P     G  +   P  P +  FS+N YK  E DAFRPT+PGHSPGVGH  PP+
Subjt:  AHRSLYLNLFALITLIIFLLHFLSVTSRPLATVAGP-----GNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPA
SwissProt top hitse value%identityAlignment
P0DN99 Precursor of CEP128.9e-0844.16Show/hide
Query:  FALITLIIFLLHFLSVT-SRPLATVAGPGNRHAISPPAPVSMS---FSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
        F ++ L++  LHF + T +R    V GP +    SPP+P       F IN YK +E  AFRPT  G S G+GHKDPP
Subjt:  FALITLIIFLLHFLSVT-SRPLATVAGPGNRHAISPPAPVSMS---FSINWYKYVEMDAFRPTSPGHSPGVGHKDPP
Q3EBM6 Precursor of CEP47.1e-0540Show/hide
Query:  LITLIIFLLHFLSVTSRPLATVAGPGNRHAISPPAPVSMSF----SINWYKYVEMDAFRPTSPGHSPGVGHKDPP
        LI L++  +HF +  +   A V       + SPP P    F     IN +K +E DAFRPT  G S G+GHK+PP
Subjt:  LITLIIFLLHFLSVTSRPLATVAGPGNRHAISPPAPVSMSF----SINWYKYVEMDAFRPTSPGHSPGVGHKDPP
Arabidopsis top hitse value%identityAlignment
AT1G31670.1 Copper amine oxidase family protein1.3e-0944.3Show/hide
Query:  FALITLIIFLLHFLSVT-SRPLATVAGPGNRHAISPPAPVSMS---FSINWYKYVEMDAFRPTSPGHSPGVGHKDPPAF
        F ++ L++  LHF + T +R    V GP +    SPP+P       F IN YK +E  AFRPT  G S G+GHKDPP F
Subjt:  FALITLIIFLLHFLSVT-SRPLATVAGPGNRHAISPPAPVSMS---FSINWYKYVEMDAFRPTSPGHSPGVGHKDPPAF
AT2G35612.1 FUNCTIONS IN: molecular_function unknown5.0e-0640Show/hide
Query:  LITLIIFLLHFLSVTSRPLATVAGPGNRHAISPPAPVSMSF----SINWYKYVEMDAFRPTSPGHSPGVGHKDPP
        LI L++  +HF +  +   A V       + SPP P    F     IN +K +E DAFRPT  G S G+GHK+PP
Subjt:  LITLIIFLLHFLSVTSRPLATVAGPGNRHAISPPAPVSMSF----SINWYKYVEMDAFRPTSPGHSPGVGHKDPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATAGAAGCTTATACTTGAACTTGTTTGCCCTTATCACTCTTATCATTTTTCTCCTTCATTTCCTCTCTGTAACATCACGGCCACTGGCCACGGTGGCCGGCCC
CGGCAATCGCCATGCAATATCACCTCCGGCTCCGGTGTCGATGTCGTTCTCGATAAATTGGTATAAATACGTCGAGATGGATGCTTTTCGGCCGACCTCGCCCGGGCACA
GCCCCGGGGTTGGTCACAAGGATCCACCCGCATTTTTTTTTACCAACATGAAGTGTGTGTTTGATATTCAAGAGCTTCTCAAAATTTCACGACTTCGTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCATAGAAGCTTATACTTGAACTTGTTTGCCCTTATCACTCTTATCATTTTTCTCCTTCATTTCCTCTCTGTAACATCACGGCCACTGGCCACGGTGGCCGGCCC
CGGCAATCGCCATGCAATATCACCTCCGGCTCCGGTGTCGATGTCGTTCTCGATAAATTGGTATAAATACGTCGAGATGGATGCTTTTCGGCCGACCTCGCCCGGGCACA
GCCCCGGGGTTGGTCACAAGGATCCACCCGCATTTTTTTTTACCAACATGAAGTGTGTGTTTGATATTCAAGAGCTTCTCAAAATTTCACGACTTCGTCTATGA
Protein sequenceShow/hide protein sequence
MAHRSLYLNLFALITLIIFLLHFLSVTSRPLATVAGPGNRHAISPPAPVSMSFSINWYKYVEMDAFRPTSPGHSPGVGHKDPPAFFFTNMKCVFDIQELLKISRLRL