CuGenDBv2

Gene ID	Tan0002029
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Vesicle-associated membrane protein
Genome location	LG10:21988006..21991366
RNA-Seq Expression	Tan0002029
Synteny	Tan0002029
Gene Ontology terms	GO:0016192 - vesicle-mediated transport (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domains	IPR001388 - Synaptobrevin IPR015300 - DNA-binding pseudobarrel domain superfamily IPR042855 - v-SNARE, coiled-coil homology domain

Homology

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GenBank top hits

e value

%identity

Alignment

RVW71146.1 Vesicle-associated membrane protein 722 [Vitis vinifera]

4.8e-10

87.23

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGL
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQG+
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGL

RWW09319.1 hypothetical protein GW17_00027191 [Ensete ventricosum]

4.8e-10

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTTS
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ  VCK++  S
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTTS

XP_011020670.1 PREDICTED: vesicle-associated membrane protein 721 isoform X2 [Populus euphratica]

1.3e-10

82.69

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTL
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL SQG+V   L
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTL

XP_024453698.1 vesicle-associated membrane protein 721 isoform X2 [Populus trichocarpa]

9.7e-11

82.69

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTL
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQG+V   L
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTL

XP_034921782.1 putative vesicle-associated membrane protein 726 isoform X2 [Populus alba]

9.7e-11

82.69

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTL
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQG+V   L
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTL

TrEMBL top hits

e value

%identity

Alignment

A0A438CGD4 Vesicle-associated membrane protein 722

2.3e-10

87.23

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGL
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQG+
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGL

A0A438GG11 Vesicle-associated membrane protein 722

2.3e-10

87.23

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGL
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQG+
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGL

A0A444EFY7 Uncharacterized protein

2.3e-10

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTTS
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ  VCK++  S
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTTS

A0A6A6MK49 Uncharacterized protein

3.0e-10

85.42

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLV
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ L+
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLV

A0A6G1DJQ4 Uncharacterized protein

6.8e-10

85.42

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLV
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ L+
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLV

SwissProt top hits

e value

%identity

Alignment

O48850 Vesicle-associated membrane protein 725

5.4e-12

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

P47192 Vesicle-associated membrane protein 722

5.4e-12

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

Q9M376 Vesicle-associated membrane protein 727

5.9e-11

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQ
        MSKL+K+KAQ+ EVK +MM+NIEKVLDRGEKIELLVDKT+NLQ Q
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQ

Q9MAS5 Putative vesicle-associated membrane protein 726

1.2e-11

75.93

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKL+KVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

Q9ZTW3 Vesicle-associated membrane protein 721

4.1e-12

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

Arabidopsis top hits

e value

%identity

Alignment

AT1G04750.1 vesicle-associated membrane protein 721

2.9e-13

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

AT1G04750.2 vesicle-associated membrane protein 721

2.9e-13

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

AT2G32670.1 vesicle-associated membrane protein 725

3.8e-13

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

AT2G33120.1 synaptobrevin-related protein 1

3.8e-13

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

AT2G33120.2 synaptobrevin-related protein 1

3.8e-13

77.78

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Query:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT
        +SKLAKVKAQV EVK VMMENIEKVLDRGEKIELLVDKT+NL+SQ    +T  T
Subjt:  MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTT

Sequences

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CDS sequence

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mRNA sequence

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ATGAGTAAGCTTGCCAAAGTGAAAGCACAGGTTTTTGAAGTCAAAAGAGTTATGATGGAAAATATCGAGAAGGTTCTTGATCGTGGAGAGAAGATTGAGCTTCTAGTGGA
TAAGACAAAAAACCTTCAATCTCAGGGACTTGTTTGCAAAACACTCACAACGTCTGACATGAGCACCCATGGAGGATTCTCTGTTCCTTGCAGATCTGCTGAACATTTTT
TTCCTTCTCTGGTTGCGATAGTGTTCTTATGTTTTATTTTCAGTTTTTTCTCAAAATGTAATGAATTGGGTTTTATCCGGATTATCTTATTTAGGTATATTCTAAGTGAG
GTTGATGGTTGCTGCAGGATTACACTCAACTTAGGCAATCTCAAGAGCTTATTGCCAAGGATCTACATGCGCGTGGAAGAGAGATTTAAACATATTTACAAAGGTCAACT
TTGGATTACATGTTATATGATTGAAATTGAACTTGAAACCTTGGGGACATGTTAGGCACACCTGCCTTTCCATTTAGAGAATGCTGATAGAAGAGGGTGGATTCTCCTTA
TCGTTTTCCAACTTGATGCCTTGTTGTTGTGGAGTTTTTCGTGAGAGTTTGCAGTTTAGGTGTGATTCGGGCATCCTCCAACACACTTTCAGCAAAACGTTTTGACTCTT
TTAGCAAGGTTCATTTTGTTTAACCATAAGCCATGGAAGTTGATTTAGCAAAAGGAAGTTGATCCGAACATCAACTAGCGAGGCTTTTAGCCATTTTGGTAATACTCAAC
TACTTGGCAGGTGACAAAGGTGTTGCAGAATTATGGTGACGTTTTCAAAGTTTTGGTCATAATGTTGCCAATAAGTTTCATGTTTAAACCCTTTTAAAGTGTGTTAGGCT
AGTGAATGTAAAGTTCTCTTGTTTTGTAAATCTCCTTGAATAGTAGTTGAGTTTATGGCTTAGGATCGTTACAATAGTTCTTGTAATTTTAGAATTGTTGACATGAGATT
TGATAATTTCTTGTAATTTTAGAATTGTTCATGAGCTTAATAGTTTGATATTGTTAAAGATGTGAATTTTGTTAAAGTGTGGAAGATTGGTTGATGAAATTATGCATTTT
TCAATATAACAAATTATTG

Protein sequence

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MSKLAKVKAQVFEVKRVMMENIEKVLDRGEKIELLVDKTKNLQSQGLVCKTLTTSDMSTHGGFSVPCRSAEHFFPSLVAIVFLCFIFSFFSKCNELGFIRIILFRYILSE
VDGCCRITLNLGNLKSLLPRIYMRVEERFKHIYKGQLWITCYMIEIELETLGTC

Tan0002029 (gene) of Snake gourd v1 genome