; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002033 (gene) of Snake gourd v1 genome

Gene IDTan0002033
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG02:71697920..71698303
RNA-Seq ExpressionTan0002033
SyntenyTan0002033
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035138.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.3e-2251.24Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA ++W  FS+LVET LRVE+S+ +++    +  G  TT       + F+  + RRF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPG--VSGKGSFKPHRGGQTS
        TPG  +S +  FK   GGQ S
Subjt:  TPG--VSGKGSFKPHRGGQTS
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.5e-2249.19Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W +FSKLVE  LRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQTSPGDRT
         P VS +GSFK    G +    R+
Subjt:  TPGVSGKGSFKPHRGGQTSPGDRT
KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.3e-2247.58Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MT++EYEK +TELSKYA++++  E  RCKRF++GLR EIRTPV AS+ W +F KLVE  LRVE+SL ++R  +        T+S  + R+R  +G +  F
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQTSPGDRT
         PGVS KG+FK    G +    R+
Subjt:  TPGVSGKGSFKPHRGGQTSPGDRT
KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]3.8e-2350.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA ++W +FSKLVE  LRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQT
         PGVS +G+FK    G +
Subjt:  TPGVSGKGSFKPHRGGQT
TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.5e-2249.19Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W +FSKLVE  LRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQTSPGDRT
         P VS +GSFK    G +    R+
Subjt:  TPGVSGKGSFKPHRGGQTSPGDRT
TrEMBL top hitse value%identityAlignment
A0A5A7SX06 DNA/RNA polymerases superfamily protein1.6e-2251.24Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        +++ EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA ++W  FS+LVET LRVE+S+ +++    +  G  TT       + F+  + RRF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPG--VSGKGSFKPHRGGQTS
        TPG  +S +  FK   GGQ S
Subjt:  TPG--VSGKGSFKPHRGGQTS
A0A5A7T1M0 Reverse transcriptase1.2e-2249.19Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W +FSKLVE  LRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQTSPGDRT
         P VS +GSFK    G +    R+
Subjt:  TPGVSGKGSFKPHRGGQTSPGDRT
A0A5A7TG44 DNA/RNA polymerases superfamily protein3.5e-2247.58Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MT++EYEK +TELSKYA++++  E  RCKRF++GLR EIRTPV AS+ W +F KLVE  LRVE+SL ++R  +        T+S  + R+R  +G +  F
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQTSPGDRT
         PGVS KG+FK    G +    R+
Subjt:  TPGVSGKGSFKPHRGGQTSPGDRT
A0A5A7UZM6 Gag protease polyprotein-like protein1.9e-2350.85Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MTI EYEKK+TELS YA+ ++  E++RCKRFE+GLR EIRTPVTA ++W +FSKLVE  LRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQT
         PGVS +G+FK    G +
Subjt:  TPGVSGKGSFKPHRGGQT
A0A5D3BB91 Reverse transcriptase1.2e-2249.19Show/hide
Query:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF
        MT+ EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W +FSKLVE  LRVE+SL ++R  +        T+S  + R+R  +  + RF
Subjt:  MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRGGQTSPGDRT
         P VS +GSFK    G +    R+
Subjt:  TPGVSGKGSFKPHRGGQTSPGDRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGTGAGATAGATAGATGCAAGAGGTTCGAGGATGGTCTACGAGC
AGAGATTCGAACACCGGTGACAGCAAGTTCTGAGTGGGCTGAGTTCTCCAAGCTTGTGGAGACGACATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAG
GAGTTGTAGGTGGTGGTCATACCACTTATTCTTGTTGTTTACCACGAGATCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTGTCTCTGGAAAAGGAAGCTTT
AAACCCCATCGTGGTGGGCAAACTAGTCCAGGGGACCGCACAGTGGACGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGTGAGATAGATAGATGCAAGAGGTTCGAGGATGGTCTACGAGC
AGAGATTCGAACACCGGTGACAGCAAGTTCTGAGTGGGCTGAGTTCTCCAAGCTTGTGGAGACGACATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAG
GAGTTGTAGGTGGTGGTCATACCACTTATTCTTGTTGTTTACCACGAGATCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTGTCTCTGGAAAAGGAAGCTTT
AAACCCCATCGTGGTGGGCAAACTAGTCCAGGGGACCGCACAGTGGACGCGTGA
Protein sequenceShow/hide protein sequence
MTIIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWAEFSKLVETTLRVERSLVDDRMGKGVVGGGHTTYSCCLPRDRFQRGDNRRFTPGVSGKGSF
KPHRGGQTSPGDRTVDA