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Tan0002061 (gene) of Snake gourd v1 genome

Gene IDTan0002061
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVascular-related unknown protein 1
Genome locationLG02:2700724..2701635
RNA-Seq ExpressionTan0002061
SyntenyTan0002061
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455422.1 PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]4.1e-5070.11Show/hide
Query:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF
        D  P NSSAA G EEQEESGWTDYLEDYF+SE +ERESSFLCSSIGSCS WD  N IS  N + N N+     +VG V   D PK   ++FKKTRTQKIF
Subjt:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF

Query:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH
        E DDSL+DTATSPI SPKV DLKVRTS  NPRFDDHI+I ++STGSGR  G YYSNKEK+VYSA   +KKGLCL P SMLLNYH
Subjt:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH

XP_011658705.1 vascular-related unknown protein 1 [Cucumis sativus]1.6e-4667.39Show/hide
Query:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF
        D  P NSSA    EEQEESGWTDYLEDYF+SE +ERESSFLCSSIGSCS WD  N IS  + + N N+     ++G V   D PK   ++FKKTRTQKIF
Subjt:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF

Query:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH
        E DDSL+DTATSPI SPKV DLKVRTS  N  FDDHI+I ++STGSGR  G YYSNKEK VYSA   +KKGLCLFP SMLLNYH
Subjt:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH

XP_022136166.1 uncharacterized protein LOC111007924 [Momordica charantia]3.7e-4363.33Show/hide
Query:  SPGNSSAADGVEEQEESGWTDYLEDYF-SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSP-FSSVGEVILDVPKK-ISFKK-TRTQKIFEDDSL
        S   +++  G  E+EESGWTDYLEDYF SS+IERE SFLCSSIGSCS D        N   NVLSP   SVGEV LD PKK I FKK TRTQKIF+DDSL
Subjt:  SPGNSSAADGVEEQEESGWTDYLEDYF-SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSP-FSSVGEVILDVPKK-ISFKK-TRTQKIFEDDSL

Query:  EDTATSPIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAA--ELKKKGLCLFPMSMLLNYHG
        EDTATSP+ SPKVADLKV+T HVN +FDDH  I  S GS       YS  EK V +AA  +LK++GLCLFP SMLL+Y G
Subjt:  EDTATSPIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAA--ELKKKGLCLFPMSMLLNYHG

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]9.1e-3472.36Show/hide
Query:  SVAGVDLSP-GNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFL-CSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIF
        + AGVD  P  +SSAA G EE  ESGWT+YLEDY  SEIER+SSFL CSS GSCSWD  ISEA N E IN LSPF SVGEVILD P K+SFKKT TQ+IF
Subjt:  SVAGVDLSP-GNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFL-CSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIF

Query:  EDDSLEDTATSPIQSPKVADLKV
        +DDSLEDTATSP+ +PKVADL V
Subjt:  EDDSLEDTATSPIQSPKVADLKV

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]1.3e-4865.76Show/hide
Query:  GVDLSPGNSS------AADGVEEQEESGWTDYLEDYFSSEIERESSFLCSSIGSCS-WDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQK
        G D  P NSS      AA G EEQEESGWTDYLEDYFSS    ESS+LCSSIGSCS WD+ IS  N N +IN     + +G++I DVP K++FKKTRTQK
Subjt:  GVDLSPGNSS------AADGVEEQEESGWTDYLEDYFSSEIERESSFLCSSIGSCS-WDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQK

Query:  IFEDDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH
        IFEDDSL+DTATSPI SPKVADLKV+TSH NPRFD    I++ TGS R  G YYS+KE  VYS+   +KKGLCLFP+SMLLNYH
Subjt:  IFEDDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein7.7e-4767.39Show/hide
Query:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF
        D  P NSSA    EEQEESGWTDYLEDYF+SE +ERESSFLCSSIGSCS WD  N IS  + + N N+     ++G V   D PK   ++FKKTRTQKIF
Subjt:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF

Query:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH
        E DDSL+DTATSPI SPKV DLKVRTS  N  FDDHI+I ++STGSGR  G YYSNKEK VYSA   +KKGLCLFP SMLLNYH
Subjt:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH

A0A1S3C0F7 uncharacterized protein LOC1034955852.0e-5070.11Show/hide
Query:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF
        D  P NSSAA G EEQEESGWTDYLEDYF+SE +ERESSFLCSSIGSCS WD  N IS  N + N N+     +VG V   D PK   ++FKKTRTQKIF
Subjt:  DLSPGNSSAADGVEEQEESGWTDYLEDYFSSE-IERESSFLCSSIGSCS-WD--NIISEANNNENINVLSPFSSVGEVIL-DVPK--KISFKKTRTQKIF

Query:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH
        E DDSL+DTATSPI SPKV DLKVRTS  NPRFDDHI+I ++STGSGR  G YYSNKEK+VYSA   +KKGLCL P SMLLNYH
Subjt:  E-DDSLEDTATSPIQSPKVADLKVRTSHVNPRFDDHISI-SSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYH

A0A6J1C2S1 uncharacterized protein LOC1110079241.8e-4363.33Show/hide
Query:  SPGNSSAADGVEEQEESGWTDYLEDYF-SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSP-FSSVGEVILDVPKK-ISFKK-TRTQKIFEDDSL
        S   +++  G  E+EESGWTDYLEDYF SS+IERE SFLCSSIGSCS D        N   NVLSP   SVGEV LD PKK I FKK TRTQKIF+DDSL
Subjt:  SPGNSSAADGVEEQEESGWTDYLEDYF-SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSP-FSSVGEVILDVPKK-ISFKK-TRTQKIFEDDSL

Query:  EDTATSPIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAA--ELKKKGLCLFPMSMLLNYHG
        EDTATSP+ SPKVADLKV+T HVN +FDDH  I  S GS       YS  EK V +AA  +LK++GLCLFP SMLL+Y G
Subjt:  EDTATSPIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAA--ELKKKGLCLFPMSMLLNYHG

A0A6J1ESI7 Uncharacterized protein4.4e-3472.36Show/hide
Query:  SVAGVDLSP-GNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFL-CSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIF
        + AGVD  P  +SSAA G EE  ESGWT+YLEDY  SEIER+SSFL CSS GSCSWD  ISEA N E IN LSPF SVGEVILD P K+SFKKT TQ+IF
Subjt:  SVAGVDLSP-GNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFL-CSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIF

Query:  EDDSLEDTATSPIQSPKVADLKV
        +DDSLEDTATSP+ +PKVADL V
Subjt:  EDDSLEDTATSPIQSPKVADLKV

A0A6J1JN61 Uncharacterized protein3.7e-3371.9Show/hide
Query:  AGVDLSP-GNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFL-CSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFED
        AGVD  P  +SSAA G EE EESGWT+YLEDY  SEIER+SSFL CSS GSCSWD  ISEA N E IN L+PF SVGEVILD P K+S KKT TQ IF+D
Subjt:  AGVDLSP-GNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFL-CSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFED

Query:  DSLEDTATSPIQSPKVADLKV
        DSLEDTATSP+ +PKVAD  V
Subjt:  DSLEDTATSPIQSPKVADLKV

SwissProt top hitse value%identityAlignment
Q5BPG5 Vascular-related unknown protein 44.1e-0530.64Show/hide
Query:  EEQEESGWTDYLEDYF--SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKI--FEDDSLEDTATSPIQSP
        +  EES WT Y ED+F  SS I     F  SS+   +     S     + +NV     S           +  K+TR ++I       LEDTA+SP  SP
Subjt:  EEQEESGWTDYLEDYF--SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKI--FEDDSLEDTATSPIQSP

Query:  KVADLKVRTSHVNPRF------DDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYHG
         V  + +     N R       DD   +S+    G L                +LKKKGLCL P+SM+ N+ G
Subjt:  KVADLKVRTSHVNPRF------DDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYHG

Q9LSZ3 Vascular-related unknown protein 16.6e-1129.02Show/hide
Query:  GVEEQEESGWTDYLEDYFS-------SEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS
        G + QEESGWT YL+D+ +        E + +     S + + +  +++S+A  +       P        ++ P K+ F + RT+KI EDDSLEDTA+S
Subjt:  GVEEQEESGWTDYLEDYFS-------SEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS

Query:  PIQSPKVADLKVRTSHVNP---RFDDHISISSSTGSGRLSGNYY-----SNKEKAVY-------------SAAELKKKGLCLFPMSMLLNYHG
        P+ SPKV+  +    H+     + +D++S S   G+ R  G++        ++K                +  +L+ +GLC+ P+SML N++G
Subjt:  PIQSPKVADLKVRTSHVNP---RFDDHISISSSTGSGRLSGNYY-----SNKEKAVY-------------SAAELKKKGLCLFPMSMLLNYHG

Arabidopsis top hitse value%identityAlignment
AT3G21710.1 unknown protein3.1e-0832.06Show/hide
Query:  GVEEQEESGWTDYLEDYFS-------SEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS
        G + QEESGWT YL+D+ +        E + +     S + + +  +++S+A  +       P        ++ P K+ F + RT+KI EDDSLEDTA+S
Subjt:  GVEEQEESGWTDYLEDYFS-------SEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS

Query:  PIQSPKVADLKVRTSHVNP---RFDDHISIS
        P+ SPKV+  +    H+     + +D++S S
Subjt:  PIQSPKVADLKVRTSHVNP---RFDDHISIS

AT3G21710.2 unknown protein4.7e-1229.02Show/hide
Query:  GVEEQEESGWTDYLEDYFS-------SEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS
        G + QEESGWT YL+D+ +        E + +     S + + +  +++S+A  +       P        ++ P K+ F + RT+KI EDDSLEDTA+S
Subjt:  GVEEQEESGWTDYLEDYFS-------SEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS

Query:  PIQSPKVADLKVRTSHVNP---RFDDHISISSSTGSGRLSGNYY-----SNKEKAVY-------------SAAELKKKGLCLFPMSMLLNYHG
        P+ SPKV+  +    H+     + +D++S S   G+ R  G++        ++K                +  +L+ +GLC+ P+SML N++G
Subjt:  PIQSPKVADLKVRTSHVNP---RFDDHISISSSTGSGRLSGNYY-----SNKEKAVY-------------SAAELKKKGLCLFPMSMLLNYHG

AT5G54790.1 unknown protein2.9e-0630.64Show/hide
Query:  EEQEESGWTDYLEDYF--SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKI--FEDDSLEDTATSPIQSP
        +  EES WT Y ED+F  SS I     F  SS+   +     S     + +NV     S           +  K+TR ++I       LEDTA+SP  SP
Subjt:  EEQEESGWTDYLEDYF--SSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKI--FEDDSLEDTATSPIQSP

Query:  KVADLKVRTSHVNPRF------DDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYHG
         V  + +     N R       DD   +S+    G L                +LKKKGLCL P+SM+ N+ G
Subjt:  KVADLKVRTSHVNPRF------DDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTTGCCGGTGTTGATCTGTCGCCGGGAAATTCCTCCGCCGCCGACGGAGTGGAAGAGCAAGAAGAGAGTGGCTGGACGGATTATTTGGAGGATTATTTCTCGTC
GGAAATTGAGAGAGAAAGCAGTTTTTTATGTTCGAGTATTGGGAGCTGTTCTTGGGATAATATTATTTCAGAAGCAAATAATAATGAAAATATCAATGTTTTAAGTCCTT
TTTCTTCTGTCGGAGAGGTGATTTTGGATGTTCCAAAGAAGATAAGTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAAGATGATTCCTTAGAAGATACAGCTACTTCT
CCAATTCAAAGTCCAAAAGTTGCTGATTTGAAAGTGAGAACATCCCATGTAAATCCGAGGTTTGATGATCATATCTCAATCAGTAGCTCCACGGGCAGCGGAAGGCTATC
GGGGAATTATTATTCAAACAAAGAAAAAGCTGTGTATTCTGCTGCAGAACTAAAGAAAAAAGGGTTGTGTTTGTTTCCTATGTCCATGCTCCTTAATTACCATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATTAATTCTCATTTCTTAAACCCCTTCTCTCAAACTCTCACAACTCTCTCTATTCTCTTTCAATGTCCGTTGCCGGTGTTGATCTGTCGCCGGGAAATTCCTCCGCCGCC
GACGGAGTGGAAGAGCAAGAAGAGAGTGGCTGGACGGATTATTTGGAGGATTATTTCTCGTCGGAAATTGAGAGAGAAAGCAGTTTTTTATGTTCGAGTATTGGGAGCTG
TTCTTGGGATAATATTATTTCAGAAGCAAATAATAATGAAAATATCAATGTTTTAAGTCCTTTTTCTTCTGTCGGAGAGGTGATTTTGGATGTTCCAAAGAAGATAAGTT
TCAAGAAAACAAGAACTCAGAAGATTTTTGAAGATGATTCCTTAGAAGATACAGCTACTTCTCCAATTCAAAGTCCAAAAGTTGCTGATTTGAAAGTGAGAACATCCCAT
GTAAATCCGAGGTTTGATGATCATATCTCAATCAGTAGCTCCACGGGCAGCGGAAGGCTATCGGGGAATTATTATTCAAACAAAGAAAAAGCTGTGTATTCTGCTGCAGA
ACTAAAGAAAAAAGGGTTGTGTTTGTTTCCTATGTCCATGCTCCTTAATTACCATGGCTGAGTTTGAGTCTAATTGGAGATGTAATTTGAGCATAATCAATAAACTCTCT
CTGTAATTCAACTCAAACCCAGTATTATAATTCATTATTA
Protein sequenceShow/hide protein sequence
MSVAGVDLSPGNSSAADGVEEQEESGWTDYLEDYFSSEIERESSFLCSSIGSCSWDNIISEANNNENINVLSPFSSVGEVILDVPKKISFKKTRTQKIFEDDSLEDTATS
PIQSPKVADLKVRTSHVNPRFDDHISISSSTGSGRLSGNYYSNKEKAVYSAAELKKKGLCLFPMSMLLNYHG