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Tan0002065 (gene) of Snake gourd v1 genome

Gene IDTan0002065
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:3602313..3603591
RNA-Seq ExpressionTan0002065
SyntenyTan0002065
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]8.6e-1968.92Show/hide
Query:  SVIFTMVFFVVMVLMASNVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY
        SV +  VFF+ M+LMASNVS+RK LDANIPV+D  NV+IGASS FY+LE ELEKR+E F++SH  ND PRGGNY
Subjt:  SVIFTMVFFVVMVLMASNVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]3.0e-1658.82Show/hide
Query:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY
        M SKRV S+I  +VFF++M+L++S    NVSARKFLD N P+DDA N+Q+ ASSLFYK++ EL++R+ED L++   ND PRGGNY
Subjt:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]3.7e-1454.65Show/hide
Query:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIP-VDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY
        M S RV+ +++ ++FF++M+ ++S    N SARKFLD N P +DDA ++Q+GASSLFYKLE EL+KR+ED L++   ND PRGGNY
Subjt:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIP-VDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]9.5e-1060.38Show/hide
Query:  RKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY
        +KFLD N P+DDA N+Q+ ASSLFYK++ EL++R+ED L++   ND PRGGNY
Subjt:  RKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein1.8e-1454.65Show/hide
Query:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIP-VDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY
        M S RV+ +++ ++FF++M+ ++S    N SARKFLD N P +DDA ++Q+GASSLFYKLE EL+KR+ED L++   ND PRGGNY
Subjt:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIP-VDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY

A0A0A0KW84 Uncharacterized protein1.5e-1658.82Show/hide
Query:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY
        M SKRV S+I  +VFF++M+L++S    NVSARKFLD N P+DDA N+Q+ ASSLFYK++ EL++R+ED L++   ND PRGGNY
Subjt:  MGSKRVNSVIFTMVFFVVMVLMAS----NVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGAAGAGAGTTAATTCAGTGATCTTTACTATGGTATTTTTTGTTGTTATGGTTTTAATGGCCTCTAACGTTTCTGCAAGAAAATTTCTTGATGCTAATATTCC
TGTTGACGATGCCTTGAACGTTCAAATTGGTGCATCTTCATTATTCTATAAATTGGAGGTGGAGTTGGAAAAAAGATATGAAGATTTCTTAAGATCACACGGTAGCAATG
ATGATCCTCGAGGTGGAAACTACGAAATGGAAACATAG
mRNA sequenceShow/hide mRNA sequence
GAAACAAGCACAGCAAAGACTCAAAGATTAATTGATCATATTTCTTAAACATCGTTAAGCTTCCTCTCTCCTTCTAAAATGGGTTCGAAGAGAGTTAATTCAGTGATCTT
TACTATGGTATTTTTTGTTGTTATGGTTTTAATGGCCTCTAACGTTTCTGCAAGAAAATTTCTTGATGCTAATATTCCTGTTGACGATGCCTTGAACGTTCAAATTGGTG
CATCTTCATTATTCTATAAATTGGAGGTGGAGTTGGAAAAAAGATATGAAGATTTCTTAAGATCACACGGTAGCAATGATGATCCTCGAGGTGGAAACTACGAAATGGAA
ACATAGAAATACAAGAAATTCATATATTAGTTTGGAAGTGAACTATGCAATATGTTTCAATTTGATTCTTGTATGGGAGATTGGAATAGATTAATAATCAAAATATATTA
ACATGATCCATAGAAATAAACAGAAGTTTT
Protein sequenceShow/hide protein sequence
MGSKRVNSVIFTMVFFVVMVLMASNVSARKFLDANIPVDDALNVQIGASSLFYKLEVELEKRYEDFLRSHGSNDDPRGGNYEMET