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Tan0002074 (gene) of Snake gourd v1 genome

Gene IDTan0002074
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RADIALIS-like 1
Genome locationLG02:7933674..7933889
RNA-Seq ExpressionTan0002074
SyntenyTan0002074
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036165.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa]1.1e-1974.65Show/hide
Query:  MSAHG-SQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        M+AHG S PWT  +NKAFEKALAV+D++TPE W NVAKAIGGKT EEVKRHY+ L EDVKHIES EI F Y
Subjt:  MSAHG-SQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

KAG7011710.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2076.12Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEIL
        MSAHGS  WT  ENKAFEKALAVFDQ+TPE W NVAKAIGGKT +EVKRHY+ L +DVKHIES+ I+
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEIL

XP_022136064.1 protein RADIALIS-like 1 [Momordica charantia]3.8e-2072.86Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MS+HGS  WT  +NKAFEKALAV+DQ+TPE W NVAKA+GGKTAEEVKRHYE L EDVK IES ++ F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

XP_022952660.1 protein RADIALIS-like 1 [Cucurbita moschata]5.9e-2177.14Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MSAHGS  WT  ENKAFEKALAVFDQ+TPE W NVAKAIGGKT +EVKRHY+ L +DVKHIES EI F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

XP_022972544.1 protein RADIALIS-like 1 [Cucurbita maxima]1.7e-2075.71Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MSAHGS  WT  ENKAFEKALAVFDQ+TP+ W NVAKAIGGKT +EVKRHY+ L  DVKHIES EI F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

TrEMBL top hitse value%identityAlignment
A0A0A0K3K0 SANT domain-containing protein2.4e-2072.86Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MSAHGS  WT +ENKAFEKALA++D++TPE W NVAKAIGGKT EEVKRHY+ L EDV HIES +I F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

A0A5A7T3V4 Protein RADIALIS-like 15.3e-2074.65Show/hide
Query:  MSAHG-SQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        M+AHG S PWT  +NKAFEKALAV+D++TPE W NVAKAIGGKT EEVKRHY+ L EDVKHIES EI F Y
Subjt:  MSAHG-SQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

A0A6J1C385 protein RADIALIS-like 11.8e-2072.86Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MS+HGS  WT  +NKAFEKALAV+DQ+TPE W NVAKA+GGKTAEEVKRHYE L EDVK IES ++ F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

A0A6J1GKV1 protein RADIALIS-like 12.8e-2177.14Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MSAHGS  WT  ENKAFEKALAVFDQ+TPE W NVAKAIGGKT +EVKRHY+ L +DVKHIES EI F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

A0A6J1I8Y0 protein RADIALIS-like 18.2e-2175.71Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY
        MSAHGS  WT  ENKAFEKALAVFDQ+TP+ W NVAKAIGGKT +EVKRHY+ L  DVKHIES EI F Y
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLY

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 11.8e-1758.82Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF
        MS+  S  WT  +NKAFE+ALA +DQ+TP  WQNVAK +GGKT EEVKRHYE L +D+  IE+  + F
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF

Q1A173 Protein RADIALIS-like 61.7e-1561.02Show/hide
Query:  PWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEI
        PWT  +NK FE+ALAV+D++TP+ W NVAKA+GGKT EEVKRHY+ L ED+ +IE+  +
Subjt:  PWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEI

Q58FS3 Transcription factor RADIALIS7.0e-1758.82Show/hide
Query:  SAHGS-QPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF
        S  GS +PW+  ENKAFE+ALAV+D++TP+ W NVA+A+ G+T EEVK+HYE L ED+K+IES ++ F
Subjt:  SAHGS-QPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF

Q8GW75 Protein RADIALIS-like 54.5e-1660.32Show/hide
Query:  SAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESD
        S   S  WT  +NK FE+ALAV+D++TP+ WQNVAKA+G K+AEEVKRHY+ L ED+ +IE D
Subjt:  SAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESD

Q9SIJ5 Protein RADIALIS-like 21.2e-1655.88Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF
        MS++GS  WT  +NKAFE+ALAV+DQ+TP+ W NVA+A+GGKT EE KR Y+ L  D++ IE+  + F
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 53.2e-1760.32Show/hide
Query:  SAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESD
        S   S  WT  +NK FE+ALAV+D++TP+ WQNVAKA+G K+AEEVKRHY+ L ED+ +IE D
Subjt:  SAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESD

AT1G75250.1 RAD-like 61.2e-1661.02Show/hide
Query:  PWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEI
        PWT  +NK FE+ALAV+D++TP+ W NVAKA+GGKT EEVKRHY+ L ED+ +IE+  +
Subjt:  PWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEI

AT1G75250.2 RAD-like 61.2e-1661.02Show/hide
Query:  PWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEI
        PWT  +NK FE+ALAV+D++TP+ W NVAKA+GGKT EEVKRHY+ L ED+ +IE+  +
Subjt:  PWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEI

AT2G21650.1 Homeodomain-like superfamily protein8.4e-1855.88Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF
        MS++GS  WT  +NKAFE+ALAV+DQ+TP+ W NVA+A+GGKT EE KR Y+ L  D++ IE+  + F
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF

AT4G39250.1 RAD-like 11.3e-1858.82Show/hide
Query:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF
        MS+  S  WT  +NKAFE+ALA +DQ+TP  WQNVAK +GGKT EEVKRHYE L +D+  IE+  + F
Subjt:  MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTCATGGGTCTCAACCATGGACTCCAATGGAAAACAAAGCATTTGAAAAGGCTTTGGCAGTGTTTGATCAAGAGACACCAGAGGGATGGCAAAATGTTGCAAA
GGCCATTGGTGGAAAAACTGCCGAAGAAGTAAAAAGGCATTATGAACGACTTGCAGAGGATGTTAAGCATATCGAGTCTGATGAAATTCTTTTTCTCTATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCTCATGGGTCTCAACCATGGACTCCAATGGAAAACAAAGCATTTGAAAAGGCTTTGGCAGTGTTTGATCAAGAGACACCAGAGGGATGGCAAAATGTTGCAAA
GGCCATTGGTGGAAAAACTGCCGAAGAAGTAAAAAGGCATTATGAACGACTTGCAGAGGATGTTAAGCATATCGAGTCTGATGAAATTCTTTTTCTCTATTGTTGA
Protein sequenceShow/hide protein sequence
MSAHGSQPWTPMENKAFEKALAVFDQETPEGWQNVAKAIGGKTAEEVKRHYERLAEDVKHIESDEILFLYC