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Tan0002091 (gene) of Snake gourd v1 genome

Gene IDTan0002091
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich protein family
Genome locationLG06:79669105..79672045
RNA-Seq ExpressionTan0002091
SyntenyTan0002091
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594002.1 hypothetical protein SDJN03_13478, partial [Cucurbita argyrosperma subsp. sororia]6.0e-7579.1Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL+F PF R+SIS + +FY LTSC   GKGD+ EG ASSG VGYEDPPEIVAKAL CFNDKYIYSACEES RL+ SGN+EVPLEKTEEYCNGPCL ETH
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCI+GIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH R E   A RASNK V+GFSFIILG FSL L
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

XP_008458378.1 PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo]5.5e-7679.1Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL FL +AR+ +S I++FY LT  CFYGK D+ E G++ G VG+EDPPEIVAKALLCFND+YIYSACEES RL+ESGNLEVPLEKTEEYCNGPCL+ET 
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCINGIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH   ERGNACRASN A LGFSF ILG FSLLL
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

XP_023000051.1 uncharacterized protein LOC111494359 [Cucurbita maxima]3.2e-7679.66Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL+F PF RISIS + +FY LTSC  YGKGD+ EG ASSG VGYEDPPEIVAKAL CFNDKYIYSACEES RL+ SGN+EVPLE+TEEYCNGPCL ETH
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCI+GIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH R E   A RASNK V+GFSFIILG FSL L
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

XP_023514279.1 uncharacterized protein LOC111778597 [Cucurbita pepo subsp. pepo]4.6e-7579.1Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        M L+F PF RISIS + +FY LTS   YGKGD+ EG ASSG VGYEDPPEIVAKALLCFNDKYIYSACEES RL+ SGN+EVPLE+TEEYCNGPCL ETH
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCI+GIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH R E G A RASNK V+GFSFIIL  FSL L
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

XP_038906636.1 uncharacterized protein LOC120092583 [Benincasa hispida]3.2e-7679.66Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MA++FL FARI IS I+I Y LT  CFYGK D+ E G++   VG+ DPPEIVAKALLCFND+YIYSACEESCRL+ESGNLEVP EKTEEYCNGPCL+ETH
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCINGIF+NFLFYN ATLQDVRDTIQAGCGYGPQRGNFDV+EH + ERGNACRASNKAVLGF   I G FSLLL
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

TrEMBL top hitse value%identityAlignment
A0A0A0KCE5 Uncharacterized protein4.4e-7175.71Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL FL FAR+ +S I++FY LT    YGK D+ E G++   VG+EDPPEIVAKALLCFND+YIYSACEES RL+ESGNLEVPLEKTEEYCNGPCL+ET 
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCI+GIF+NFLFYN ATLQDVRDT+ AGCGYGPQRGNFDV+EH   ERGNACRASN A LGFSF IL   SLLL
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

A0A1S3C8B8 uncharacterized protein LOC1034978042.6e-7679.1Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL FL +AR+ +S I++FY LT  CFYGK D+ E G++ G VG+EDPPEIVAKALLCFND+YIYSACEES RL+ESGNLEVPLEKTEEYCNGPCL+ET 
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCINGIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH   ERGNACRASN A LGFSF ILG FSLLL
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X13.5e-6884Show/hide
Query:  GKGDEVEG-GASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDT
        GKGD+VEG GA+SG +GYEDPPEIVAKALLCFNDKYIY ACEESCRL+ESGN+EVP+EKT+E+CNGPCL ETHLVLDCIN IFTNFLFYN ATLQDVRDT
Subjt:  GKGDEVEG-GASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDT

Query:  IQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        IQAGC YGPQRGNFDV +H R ERG ACRASN AVLGFSFIILG F  LL
Subjt:  IQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

A0A6J1EX17 uncharacterized protein LOC1114369378.5e-7578.53Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL+F PF R+SIS + +FY LTSC   GKGD+ EG ASSG VGYEDPPEIVAKAL CFNDKYIYSACEES RL+ SGN+EVPLEKTEEYC+GPCL ETH
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCI+GIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH R E   A RASNK V+GFSFIILG FSL L
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

A0A6J1KET4 uncharacterized protein LOC1114943591.5e-7679.66Show/hide
Query:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH
        MAL+F PF RISIS + +FY LTSC  YGKGD+ EG ASSG VGYEDPPEIVAKAL CFNDKYIYSACEES RL+ SGN+EVPLE+TEEYCNGPCL ETH
Subjt:  MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETH

Query:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL
        LVLDCI+GIF+NFLFYN ATLQDVRDTI AGCGYGPQRGNFDV+EH R E   A RASNK V+GFSFIILG FSL L
Subjt:  LVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)1.8e-2441.41Show/hide
Query:  IVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREE
        +V +A  CFN+  +Y  C E+ RL + G  +VP E+T+ +CNGPC AET LVL CIN + ++F+FYN AT +DVR+ ++ GC     RGNF+V ++    
Subjt:  IVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREE

Query:  RGNACRASNKAVLG-FSFIILGTFSLLL
        +G     + K + G F  ++LG   L+L
Subjt:  RGNACRASNKAVLG-FSFIILGTFSLLL

AT5G49350.1 Glycine-rich protein family6.3e-3853.17Show/hide
Query:  GKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDTI
        G G    GG   G +G EDPPEIVAKAL C N+K+IY  C+ES RL  +G+L +PL +TEE+C GPC +ETHL L+CI  I  ++ F+N AT+ D+R+T+
Subjt:  GKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDTI

Query:  QAGCGYGPQRGNFDVMEHTREERGNA
        ++GC YGP+RG F+V+EH  +E  NA
Subjt:  QAGCGYGPQRGNFDVMEHTREERGNA

AT5G49350.2 Glycine-rich protein family6.3e-3853.17Show/hide
Query:  GKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDTI
        G G    GG   G +G EDPPEIVAKAL C N+K+IY  C+ES RL  +G+L +PL +TEE+C GPC +ETHL L+CI  I  ++ F+N AT+ D+R+T+
Subjt:  GKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIFTNFLFYNTATLQDVRDTI

Query:  QAGCGYGPQRGNFDVMEHTREERGNA
        ++GC YGP+RG F+V+EH  +E  NA
Subjt:  QAGCGYGPQRGNFDVMEHTREERGNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCATGTTCTTGCCTTTTGCTAGAATTTCGATTTCGGTTATTGTCATATTCTACTTTCTCACTTCTTGTTGTTTTTACGGAAAAGGGGATGAAGTTGAGGGTGG
TGCATCAAGCGGATTAGTCGGTTATGAGGACCCGCCCGAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATATTTACAGCGCGTGTGAAGAATCATGTAGAT
TAAGGGAGAGTGGGAATCTGGAAGTCCCGCTGGAAAAAACAGAAGAATACTGCAACGGGCCGTGTTTGGCTGAAACGCATTTAGTGCTTGATTGTATTAATGGCATTTTT
ACCAATTTCTTGTTTTACAATACTGCCACGTTGCAAGATGTTAGGGACACCATCCAGGCTGGATGTGGCTATGGCCCACAAAGAGGAAACTTCGACGTGATGGAGCATAC
ACGAGAGGAAAGAGGCAATGCATGCAGGGCCTCCAACAAGGCAGTTCTTGGATTTAGCTTTATCATTTTGGGCACTTTTAGTTTATTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATCAATTATGGCTCTCATGTTCTTGCCTTTTGCTAGAATTTCGATTTCGGTTATTGTCATATTCTACTTTCTCACTTCTTGTTGTTTTTACGGAAAAGGGGATGAAGTTG
AGGGTGGTGCATCAAGCGGATTAGTCGGTTATGAGGACCCGCCCGAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATATTTACAGCGCGTGTGAAGAATCA
TGTAGATTAAGGGAGAGTGGGAATCTGGAAGTCCCGCTGGAAAAAACAGAAGAATACTGCAACGGGCCGTGTTTGGCTGAAACGCATTTAGTGCTTGATTGTATTAATGG
CATTTTTACCAATTTCTTGTTTTACAATACTGCCACGTTGCAAGATGTTAGGGACACCATCCAGGCTGGATGTGGCTATGGCCCACAAAGAGGAAACTTCGACGTGATGG
AGCATACACGAGAGGAAAGAGGCAATGCATGCAGGGCCTCCAACAAGGCAGTTCTTGGATTTAGCTTTATCATTTTGGGCACTTTTAGTTTATTGCTTTGAAAACCCATA
ATCATTATCTCATTGTCAATGTATTACCTTGGCTTATATCAATCAATTATTGAGACATAATGTATGAAACATAG
Protein sequenceShow/hide protein sequence
MALMFLPFARISISVIVIFYFLTSCCFYGKGDEVEGGASSGLVGYEDPPEIVAKALLCFNDKYIYSACEESCRLRESGNLEVPLEKTEEYCNGPCLAETHLVLDCINGIF
TNFLFYNTATLQDVRDTIQAGCGYGPQRGNFDVMEHTREERGNACRASNKAVLGFSFIILGTFSLLL