; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002096 (gene) of Snake gourd v1 genome

Gene IDTan0002096
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPUM-HD domain-containing protein
Genome locationLG01:6256052..6258756
RNA-Seq ExpressionTan0002096
SyntenyTan0002096
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8406236.1 hypothetical protein HHK36_008321 [Tetracentron sinense]8.0e-3334.77Show/hide
Query:  ILAAEDRGMKEMII---TKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFL--YACNDHFCIRRILNAMANNCVAIATNQFGCIVL
        +++    G K +II   T    A + L+  L    Q   V   L     S T   NG H+++  L  ++  D+   + +LNA+A+NCV IA ++ GC +L
Subjt:  ILAAEDRGMKEMII---TKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFL--YACNDHFCIRRILNAMANNCVAIATNQFGCIVL

Query:  QHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLL
        + C+   + +  L    +  I  N+L+LAED +GNYVVQ++++ +    T  ++ QLEGR++ L+  K GSNVVE C++M  + +  +I++EL NS+D+ 
Subjt:  QHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLL

Query:  SIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKIN
        ++ QD +GNYV+Q ALE    +  G +Y +LV  I++H  +L+ H +GR V+++I+
Subjt:  SIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKIN

RAL38886.1 hypothetical protein DM860_015247 [Cuscuta australis]2.6e-3131.03Show/hide
Query:  SSNRNSNNSFDFNSPSSSNYDYIGVVGGG--GDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFEGNRNRLGNMSPFMGENVSNNIVI
        + N N+N+S    S SS+N      VGGG        P  +T    S      ++ T +   R  I +    Q S    + +LG   P   E + + +  
Subjt:  SSNRNSNNSFDFNSPSSSNYDYIGVVGGG--GDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFEGNRNRLGNMSPFMGENVSNNIVI

Query:  GDNRQQPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILA--AEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYK
            +  +  L    + N + +++ + C+   M  + ++   D  R+LA   +  G + M         + ++R+L    QR  V   L     + T   
Subjt:  GDNRQQPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILA--AEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYK

Query:  NGQHLLEFFL-YACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQ
        NG H+++  + +  N+    ++ILN +ANNC++IAT++ GC VLQHC+    +++     L+  II+NSL+L+E  YGNYVVQ++V  +    T  IV Q
Subjt:  NGQHLLEFFL-YACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQ

Query:  LEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKIN
        L G F  L+  K GSNVVEKCL+  E+R+  +I+ E+  S   L + QD +GNYVVQ     AL+   G L   +V  I +H ++LQ+H HG+ V+ K  
Subjt:  LEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKIN

Query:  RLNCRL
            RL
Subjt:  RLNCRL

XP_017256512.1 PREDICTED: pumilio homolog 12-like [Daucus carota subsp. sativus]1.2e-3133.45Show/hide
Query:  IHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFF
        + +L      N + +++ E C+   M  M M    D R +L+         + T    A + ++ NLK   Q      VL++         NG H+++  
Subjt:  IHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFF

Query:  LYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELAR
        L    D   I+ IL  +A +C+ IA ++ GC  LQHC+   Y +      L D+I  N+L+LAE  +GNYVVQ ++   +   T  I+ QLEG F  LA 
Subjt:  LYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELAR

Query:  SKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKINRLN
        +K GSNVVEKCL+   + ++ +I+ EL  S D L + QD YGNYV Q ALE A      +  V LV  I  H   + +H HG+ V+ ++  L+
Subjt:  SKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKINRLN

XP_020552057.1 putative pumilio homolog 8, chloroplastic [Sesamum indicum]8.9e-3235.69Show/hide
Query:  NEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKV-REAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNG----QHLLEFFLYACN
        N + +++LE C+   M  + +   DD        DR +K++ I      A + LI ++    QR  V  VL+    +     NG    QH L+FF    N
Subjt:  NEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKV-REAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNG----QHLLEFFLYACN

Query:  DHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGS
         H     ILN +A+NC+ IAT++ GC VLQ C+   + +      L+  I  NSL+L+E  YGNYVVQ+++  RI   T  I+ QL G +  L+ +K GS
Subjt:  DHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGS

Query:  NVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQK
        NVVEKCL+  E  +++ I+ E+TNS + L + QD YGNYV Q AL  +     G +  N+   I  H + L +H HG+ V+ +
Subjt:  NVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQK

XP_022149262.1 pumilio homolog 12-like [Momordica charantia]8.0e-4934.17Show/hide
Query:  NQTQQSSNRNSNNSFDF---NSPSSSNYDYIGVVGGGGDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFE-----GNR---------
        N   Q+SN NS +   F       S   ++ G VG     R + +SST  +Q+ +  +L QN  + LNRLSIN  A + N F+     GN          
Subjt:  NQTQQSSNRNSNNSFDF---NSPSSSNYDYIGVVGGGGDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFE-----GNR---------

Query:  ---NRLGNMSPFMGENVSNNIVIGDNRQQPIH---SLQNG------------------------MTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAA
           N+L ++S    +   NNIVIG N Q  I+   S  NG                         ++    R +++  D VS  A+++ GC+ L++ L  
Subjt:  ---NRLGNMSPFMGENVSNNIVIGDNRQQPIH---SLQNG------------------------MTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAA

Query:  EDRG-MKEMIITKV-----------------------------------------------------REAGKALIRNLKVEAQRL-AVTFVLEEYICSFT
        E     K+ IITKV                                                     +E+ KALI N+K + +++  + +++ ++ICS T
Subjt:  EDRG-MKEMIITKV-----------------------------------------------------REAGKALIRNLKVEAQRL-AVTFVLEEYICSFT

Query:  NYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIV
        N  N + +LEFF+ A + +F  + + NAMA+NCVAI T++ GC VLQ CIC  YI+A L+PYLL  I++NS  L+E+ +GNYVVQ  + + I    R I 
Subjt:  NYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIV

Query:  EQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVE-LTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQ
        E+L+GRF +L++S  GSNVVEKCL++ E  E+ KIV E L N T + ++ QD++GN+V+Q ALEQ   RG  +LY  LVK I      L  H +GR V  
Subjt:  EQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVE-LTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQ

Query:  KINRLNCRLSFMNKFYKK
        KI     +LS  NK  KK
Subjt:  KINRLNCRLSFMNKFYKK

TrEMBL top hitse value%identityAlignment
A0A161ZUZ8 PUM-HD domain-containing protein5.6e-3233.45Show/hide
Query:  IHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFF
        + +L      N + +++ E C+   M  M M    D R +L+         + T    A + ++ NLK   Q      VL++         NG H+++  
Subjt:  IHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFF

Query:  LYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELAR
        L    D   I+ IL  +A +C+ IA ++ GC  LQHC+   Y +      L D+I  N+L+LAE  +GNYVVQ ++   +   T  I+ QLEG F  LA 
Subjt:  LYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELAR

Query:  SKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKINRLN
        +K GSNVVEKCL+   + ++ +I+ EL  S D L + QD YGNYV Q ALE A      +  V LV  I  H   + +H HG+ V+ ++  L+
Subjt:  SKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKINRLN

A0A328D0C2 PUM-HD domain-containing protein1.2e-3131.03Show/hide
Query:  SSNRNSNNSFDFNSPSSSNYDYIGVVGGG--GDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFEGNRNRLGNMSPFMGENVSNNIVI
        + N N+N+S    S SS+N      VGGG        P  +T    S      ++ T +   R  I +    Q S    + +LG   P   E + + +  
Subjt:  SSNRNSNNSFDFNSPSSSNYDYIGVVGGG--GDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFEGNRNRLGNMSPFMGENVSNNIVI

Query:  GDNRQQPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILA--AEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYK
            +  +  L    + N + +++ + C+   M  + ++   D  R+LA   +  G + M         + ++R+L    QR  V   L     + T   
Subjt:  GDNRQQPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILA--AEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYK

Query:  NGQHLLEFFL-YACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQ
        NG H+++  + +  N+    ++ILN +ANNC++IAT++ GC VLQHC+    +++     L+  II+NSL+L+E  YGNYVVQ++V  +    T  IV Q
Subjt:  NGQHLLEFFL-YACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQ

Query:  LEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKIN
        L G F  L+  K GSNVVEKCL+  E+R+  +I+ E+  S   L + QD +GNYVVQ     AL+   G L   +V  I +H ++LQ+H HG+ V+ K  
Subjt:  LEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKIN

Query:  RLNCRL
            RL
Subjt:  RLNCRL

A0A5C7H5Y5 Uncharacterized protein9.9e-2940.1Show/hide
Query:  AGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIIN
        A + L+ NL    Q   VT  L     + T   NG H+++  L   +D    + +LN +ANNC  IAT++ GC VLQHC+   Y K      L+  II N
Subjt:  AGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIIN

Query:  SLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALA
        +L L +D+YGNYVVQH+++ ++   T  ++ QLEG ++ L+ +K GSNVVEKCL++  ++E ++IV+EL  S +   +  D YGNYV+Q AL  + A
Subjt:  SLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALA

A0A6A2Z6N2 PUM-HD domain-containing protein6.2e-3136.36Show/hide
Query:  LIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLL
        L+  +  E QR  +  VL+  + + TN  NG H++   LY  ++    R ++  + ++C+ IATN+ GC VLQ C+  +++ A +    LDRII N+LLL
Subjt:  LIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLL

Query:  AEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELY
        +E+ +GNYVVQ V++ R       ++ QLEG F  L+ +K GSNVVEKCL+   ++   +I++E+ N  D L +    YGNYVVQ     AL+   G+L 
Subjt:  AEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELY

Query:  VNLVKGIIVHGSTLQTHLHGRTVMQKI----NRLNCRLSFMN
          L+  I  H S LQ++  GR V+ +     NR+   +++ N
Subjt:  VNLVKGIIVHGSTLQTHLHGRTVMQKI----NRLNCRLSFMN

A0A6J1D7G3 pumilio homolog 12-like3.9e-4934.17Show/hide
Query:  NQTQQSSNRNSNNSFDF---NSPSSSNYDYIGVVGGGGDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFE-----GNR---------
        N   Q+SN NS +   F       S   ++ G VG     R + +SST  +Q+ +  +L QN  + LNRLSIN  A + N F+     GN          
Subjt:  NQTQQSSNRNSNNSFDF---NSPSSSNYDYIGVVGGGGDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFE-----GNR---------

Query:  ---NRLGNMSPFMGENVSNNIVIGDNRQQPIH---SLQNG------------------------MTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAA
           N+L ++S    +   NNIVIG N Q  I+   S  NG                         ++    R +++  D VS  A+++ GC+ L++ L  
Subjt:  ---NRLGNMSPFMGENVSNNIVIGDNRQQPIH---SLQNG------------------------MTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAA

Query:  EDRG-MKEMIITKV-----------------------------------------------------REAGKALIRNLKVEAQRL-AVTFVLEEYICSFT
        E     K+ IITKV                                                     +E+ KALI N+K + +++  + +++ ++ICS T
Subjt:  EDRG-MKEMIITKV-----------------------------------------------------REAGKALIRNLKVEAQRL-AVTFVLEEYICSFT

Query:  NYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIV
        N  N + +LEFF+ A + +F  + + NAMA+NCVAI T++ GC VLQ CIC  YI+A L+PYLL  I++NS  L+E+ +GNYVVQ  + + I    R I 
Subjt:  NYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIV

Query:  EQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVE-LTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQ
        E+L+GRF +L++S  GSNVVEKCL++ E  E+ KIV E L N T + ++ QD++GN+V+Q ALEQ   RG  +LY  LVK I      L  H +GR V  
Subjt:  EQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVE-LTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQ

Query:  KINRLNCRLSFMNKFYKK
        KI     +LS  NK  KK
Subjt:  KINRLNCRLSFMNKFYKK

SwissProt top hitse value%identityAlignment
Q9LDW3 Pumilio homolog 111.4e-1936.08Show/hide
Query:  LIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHL----LEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIIN
        LI  +  + Q   V   L     S     NG H+    L+FF  + ND+   + IL A    C+ IAT + GC VLQ C+   Y        L+D I  N
Subjt:  LIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHL----LEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIIN

Query:  SLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQ
        SLLLA+D +GNY+VQ++++ ++      ++ +L G + +LA  K GS+VVEKCL+   +    +IV EL +  +   + QD Y NYV+QCAL +
Subjt:  SLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQ

Q9LVC3 Pumilio homolog 123.3e-2930.19Show/hide
Query:  QPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKG----------CDDLRRILAAEDRGMKEMIITKV------REAGKALIRNLKVEAQRLAVTFVLEE
        Q I S ++G     IF  I+   D++S   M   G          C++ +R+        K  ++ K+        A + ++   K E +   +   L+ 
Subjt:  QPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKG----------CDDLRRILAAEDRGMKEMIITKV------REAGKALIRNLKVEAQRLAVTFVLEE

Query:  YICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIED
         I       NG H+++  L      +C + +  A   +CV +AT++ GC VLQ C+   Y +     +L+  I  N+LLL++D +GNYV+Q+V + +++ 
Subjt:  YICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIED

Query:  ATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHG
        AT  I+EQLEG ++EL+  K  SNVVEKCL++ + +   +I+ EL N   L  +  D YGNYV+Q AL+Q+     G ++  LV  I ++ S+L+T+ +G
Subjt:  ATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHG

Query:  RTVMQKIN
        + V+  ++
Subjt:  RTVMQKIN

Q9ZW02 Pumilio homolog 38.9e-1928.38Show/hide
Query:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY
        Q++ +   L+ ++      +NG H+++  +  C     I  I++    + V ++T+ +GC V+Q    HC  P          +++ I+    +L +D Y
Subjt:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY

Query:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV
        GNYVVQHV++    D    I+++L G+  ++++ K  SNVVEKCL  G   E   +V E+  +TD    L ++ +D + NYVVQ  LE    +   EL +
Subjt:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV

Query:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL
          +K   VH + L+ + +G+ ++ ++ +L
Subjt:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL

Q9ZW06 Pumilio homolog 26.2e-2029.26Show/hide
Query:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY
        Q++ +   L+ ++      +NG H+++  +  C     I  I++    N V ++T+ +GC V+Q    HC  P          ++D I+    +LA+D Y
Subjt:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY

Query:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV
        GNYV+QHV++    D    I+++L G+  ++++ K  SNVVEKCL  G   E   +V E+  +TD    L ++ +D + NYVVQ  LE    +   EL +
Subjt:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV

Query:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL
          +K   VH + L+ + +G+ ++ ++ +L
Subjt:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL

Q9ZW07 Pumilio homolog 11.8e-1929.69Show/hide
Query:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY
        Q++ +   L+ ++      +NG H+++  +  C     I  I++    + V ++T+ +GC V+Q    HC  P          +++ I+    +LA+D Y
Subjt:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY

Query:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV
        GNYVVQHV++    D    I+++L G+  ++++ K  SNVVEKCL  G   E   +V E+  +TD    L ++ +D + NYVVQ  LE    +   EL +
Subjt:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV

Query:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL
          +K   VH + L+ + +G+ V+ +I +L
Subjt:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL

Arabidopsis top hitse value%identityAlignment
AT2G29190.1 pumilio 24.4e-2129.26Show/hide
Query:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY
        Q++ +   L+ ++      +NG H+++  +  C     I  I++    N V ++T+ +GC V+Q    HC  P          ++D I+    +LA+D Y
Subjt:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY

Query:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV
        GNYV+QHV++    D    I+++L G+  ++++ K  SNVVEKCL  G   E   +V E+  +TD    L ++ +D + NYVVQ  LE    +   EL +
Subjt:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV

Query:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL
          +K   VH + L+ + +G+ ++ ++ +L
Subjt:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL

AT2G29190.2 pumilio 24.4e-2129.26Show/hide
Query:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY
        Q++ +   L+ ++      +NG H+++  +  C     I  I++    N V ++T+ +GC V+Q    HC  P          ++D I+    +LA+D Y
Subjt:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY

Query:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV
        GNYV+QHV++    D    I+++L G+  ++++ K  SNVVEKCL  G   E   +V E+  +TD    L ++ +D + NYVVQ  LE    +   EL +
Subjt:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV

Query:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL
          +K   VH + L+ + +G+ ++ ++ +L
Subjt:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL

AT2G29200.1 pumilio 11.3e-2029.69Show/hide
Query:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY
        Q++ +   L+ ++      +NG H+++  +  C     I  I++    + V ++T+ +GC V+Q    HC  P          +++ I+    +LA+D Y
Subjt:  QRLAVTFVLEEYICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQ----HCICPMYIKAGLLPYLLDRIIINSLLLAEDNY

Query:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV
        GNYVVQHV++    D    I+++L G+  ++++ K  SNVVEKCL  G   E   +V E+  +TD    L ++ +D + NYVVQ  LE    +   EL +
Subjt:  GNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTD----LLSIAQDSYGNYVVQCALEQALARGSGELYV

Query:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL
          +K   VH + L+ + +G+ V+ +I +L
Subjt:  NLVKGIIVHGSTLQTHLHGRTVMQKINRL

AT4G08840.1 pumilio 119.8e-2136.08Show/hide
Query:  LIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHL----LEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIIN
        LI  +  + Q   V   L     S     NG H+    L+FF  + ND+   + IL A    C+ IAT + GC VLQ C+   Y        L+D I  N
Subjt:  LIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHL----LEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIIN

Query:  SLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQ
        SLLLA+D +GNY+VQ++++ ++      ++ +L G + +LA  K GS+VVEKCL+   +    +IV EL +  +   + QD Y NYV+QCAL +
Subjt:  SLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQ

AT5G56510.1 pumilio 122.3e-3030.19Show/hide
Query:  QPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKG----------CDDLRRILAAEDRGMKEMIITKV------REAGKALIRNLKVEAQRLAVTFVLEE
        Q I S ++G     IF  I+   D++S   M   G          C++ +R+        K  ++ K+        A + ++   K E +   +   L+ 
Subjt:  QPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKG----------CDDLRRILAAEDRGMKEMIITKV------REAGKALIRNLKVEAQRLAVTFVLEE

Query:  YICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIED
         I       NG H+++  L      +C + +  A   +CV +AT++ GC VLQ C+   Y +     +L+  I  N+LLL++D +GNYV+Q+V + +++ 
Subjt:  YICSFTNYKNGQHLLEFFLYACNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIED

Query:  ATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHG
        AT  I+EQLEG ++EL+  K  SNVVEKCL++ + +   +I+ EL N   L  +  D YGNYV+Q AL+Q+     G ++  LV  I ++ S+L+T+ +G
Subjt:  ATRCIVEQLEGRFSELARSKIGSNVVEKCLQMGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHG

Query:  RTVMQKIN
        + V+  ++
Subjt:  RTVMQKIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAGAGCAGAGCAGTAATCAAACTCAGCAGAGCTCCAACAGGAATTCTAACAATTCCTTTGATTTCAACTCACCCTCCTCCAGTAATTATGATTATATCGGCGT
CGTCGGCGGCGGCGGTGATGATCGAGGATTACCTCGATCGTCGACGCCATTGTTCCAAAGCCCTAATCCTGTCTCTCTGTTTCAAAATACGATGTTAGGCCTCAACAGAC
TATCAATCAACTCTTTCGCGCCGAACCAGAACAGTTTTGAGGGAAATCGAAATCGATTGGGAAATATGAGTCCATTTATGGGCGAAAATGTAAGCAATAACATCGTAATC
GGAGACAATCGGCAGCAACCAATCCATTCTTTGCAAAATGGAATGACGAATAATGAGATTTTCCGAAGGATACTGGAGAGATGTGATTTCGTGTCGATGTGTGCGATGAC
GATGAAGGGATGCGATGATCTTCGGAGAATTCTGGCGGCGGAGGATCGCGGAATGAAAGAGATGATAATTACGAAAGTGAGGGAGGCCGGGAAGGCATTGATCCGAAATC
TCAAAGTCGAAGCACAGCGGCTTGCTGTCACATTTGTTCTTGAAGAGTATATTTGCAGCTTCACCAACTATAAAAACGGTCAACATCTGCTGGAATTCTTCCTCTACGCC
TGCAACGACCATTTCTGTATAAGGCGTATTCTCAATGCAATGGCAAACAATTGTGTAGCGATCGCGACGAATCAGTTTGGATGTATAGTTCTACAGCATTGTATTTGTCC
AATGTATATAAAAGCCGGTCTCCTACCATATTTACTTGATAGAATCATAATAAACTCACTCCTTCTAGCGGAAGATAATTACGGGAACTATGTGGTTCAACATGTAGTTG
ATGCAAGGATTGAAGATGCAACAAGATGCATAGTGGAACAGTTGGAGGGGAGATTTAGTGAACTAGCAAGGAGTAAAATTGGAAGCAATGTGGTGGAGAAGTGCTTGCAA
ATGGGTGAACAAAGAGAACTTGTGAAGATTGTTGTGGAATTGACAAATTCAACTGACCTTCTTAGTATTGCTCAAGATTCTTATGGCAATTATGTTGTTCAATGTGCACT
TGAACAAGCCCTTGCCCGGGGAAGTGGAGAACTTTATGTTAACTTGGTTAAAGGCATCATCGTTCATGGTTCAACTCTCCAAACGCACCTACATGGAAGAACAGTTATGC
AAAAAATCAACAGACTTAATTGCAGGCTCTCATTCATGAATAAATTCTACAAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAGAGCAGAGCAGTAATCAAACTCAGCAGAGCTCCAACAGGAATTCTAACAATTCCTTTGATTTCAACTCACCCTCCTCCAGTAATTATGATTATATCGGCGT
CGTCGGCGGCGGCGGTGATGATCGAGGATTACCTCGATCGTCGACGCCATTGTTCCAAAGCCCTAATCCTGTCTCTCTGTTTCAAAATACGATGTTAGGCCTCAACAGAC
TATCAATCAACTCTTTCGCGCCGAACCAGAACAGTTTTGAGGGAAATCGAAATCGATTGGGAAATATGAGTCCATTTATGGGCGAAAATGTAAGCAATAACATCGTAATC
GGAGACAATCGGCAGCAACCAATCCATTCTTTGCAAAATGGAATGACGAATAATGAGATTTTCCGAAGGATACTGGAGAGATGTGATTTCGTGTCGATGTGTGCGATGAC
GATGAAGGGATGCGATGATCTTCGGAGAATTCTGGCGGCGGAGGATCGCGGAATGAAAGAGATGATAATTACGAAAGTGAGGGAGGCCGGGAAGGCATTGATCCGAAATC
TCAAAGTCGAAGCACAGCGGCTTGCTGTCACATTTGTTCTTGAAGAGTATATTTGCAGCTTCACCAACTATAAAAACGGTCAACATCTGCTGGAATTCTTCCTCTACGCC
TGCAACGACCATTTCTGTATAAGGCGTATTCTCAATGCAATGGCAAACAATTGTGTAGCGATCGCGACGAATCAGTTTGGATGTATAGTTCTACAGCATTGTATTTGTCC
AATGTATATAAAAGCCGGTCTCCTACCATATTTACTTGATAGAATCATAATAAACTCACTCCTTCTAGCGGAAGATAATTACGGGAACTATGTGGTTCAACATGTAGTTG
ATGCAAGGATTGAAGATGCAACAAGATGCATAGTGGAACAGTTGGAGGGGAGATTTAGTGAACTAGCAAGGAGTAAAATTGGAAGCAATGTGGTGGAGAAGTGCTTGCAA
ATGGGTGAACAAAGAGAACTTGTGAAGATTGTTGTGGAATTGACAAATTCAACTGACCTTCTTAGTATTGCTCAAGATTCTTATGGCAATTATGTTGTTCAATGTGCACT
TGAACAAGCCCTTGCCCGGGGAAGTGGAGAACTTTATGTTAACTTGGTTAAAGGCATCATCGTTCATGGTTCAACTCTCCAAACGCACCTACATGGAAGAACAGTTATGC
AAAAAATCAACAGACTTAATTGCAGGCTCTCATTCATGAATAAATTCTACAAGAAGAAGTGA
Protein sequenceShow/hide protein sequence
METEQSSNQTQQSSNRNSNNSFDFNSPSSSNYDYIGVVGGGGDDRGLPRSSTPLFQSPNPVSLFQNTMLGLNRLSINSFAPNQNSFEGNRNRLGNMSPFMGENVSNNIVI
GDNRQQPIHSLQNGMTNNEIFRRILERCDFVSMCAMTMKGCDDLRRILAAEDRGMKEMIITKVREAGKALIRNLKVEAQRLAVTFVLEEYICSFTNYKNGQHLLEFFLYA
CNDHFCIRRILNAMANNCVAIATNQFGCIVLQHCICPMYIKAGLLPYLLDRIIINSLLLAEDNYGNYVVQHVVDARIEDATRCIVEQLEGRFSELARSKIGSNVVEKCLQ
MGEQRELVKIVVELTNSTDLLSIAQDSYGNYVVQCALEQALARGSGELYVNLVKGIIVHGSTLQTHLHGRTVMQKINRLNCRLSFMNKFYKKK