| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-210 | 60.03 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD FQDYMIE GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAVETAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
VLV+NPKKLEPRS+LC FVGYPKETRGGLF+DP+ENRV VSTNATFLEEDH+R+H PRSK+VL+E ++ +D S+ V + +TS Q SQ L
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
Query: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
MPRRSGRVV QP+RY+GL ET VV PDD EDPL+Y AM DVDKD+W+KAMD EMESMYFN + ELVD P+GVKPIGCKWIYKRKR
Subjt: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
Query: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
GVD KSI IL +I +YDYE+WQMDVKTAFLNG L+E+I+M QP+GFI QGQEQKVC+L+RSIYGLKQASRSWNI FD AI
Subjt: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
Query: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
KSYGFDQNV+EPCVYKK VAFLV+YVD ILL GN+V +LTDVK WLA+QFQMKDLGEAQYVL
Subjt: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
Query: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
GS MY MLCTRPDICYAVGIV RYQ N GLDH VK +LKYLRRTR+Y LVYG DLILTGYT
Subjt: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
Query: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
R ST + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-211 | 60.33 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD FQDYMIE GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAVETAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
VLV+NPKKLEPRS+LC FVGYPKETRGGLF+DPKENRV VSTNATFLEEDH+R+H PRSK+VL+E ++ +D S+ V + +TS Q SQ L
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
Query: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
MPRRSGRVV QP+RY+GL ET VV PDD EDPL+Y AM DVDKD+W+KAMD EMESMYFN + ELVD P+GVKPIGCKWIYKRKR
Subjt: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
Query: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
GVD KSI IL +I +YDYE+WQMDVKTAFLNG L+E+I+M QP+GFI QGQEQKVC+L+RSIYGLKQASRSWNI FD AI
Subjt: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
Query: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
KSYGFDQNV+EPCVYKK VAFLV+YVD ILL GN+V +LTDVK WLA+QFQMKDLGE QYVL
Subjt: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
Query: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
GS MY MLCTRPDICYAVGIV RYQ N GLDH VK ILKYLRRTR+Y LVYG DLILTGYT
Subjt: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
Query: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
R ST R + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 2.7e-206 | 58.11 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD +FQ+Y++E GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAVYILN VPSKSV ETP +LW+GRKGSL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKE---EFIDGASTSTSVVDPSTSSQI-RSQ
VL +NPKKLEPRSKLCLFVGYPK TRGG FYDPK+N+V VSTNATFLEEDH+R+H PRSKIVLNE+ ++ E ++ S T VV +S++ + Q
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKE---EFIDGASTSTSVVDPSTSSQI-RSQ
Query: ELGMPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDG------
L PRRSGRV P RYM L ET V D D EDPLT+ AM DVDKDEWIKAM+ E+ESMYFN + +LVDQPDGVKPIGCKWIYKRKRG DG
Subjt: ELGMPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDG------
Query: --------------------------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFD
KSI IL +I AY+DYE+WQMDVKTAFLNG L+ETIYM QP+GFI GQEQK+C+L+RSIYGLKQASRSWNI FD
Subjt: --------------------------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFD
Query: EAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------
AIKSYGFDQ V+EPCVYK+ ++K+VAFLV+YVD ILL GN++ LTD+K+WLA+QFQMKDLGEAQ+VL
Subjt: EAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------
Query: ---------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILT
GS MY MLCTRPDICYAVGIV RYQ N GL H VK ILKYLRRTR+Y LVYG DLILT
Subjt: ---------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILT
Query: GYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
GYT R ST + IL + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: GYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-210 | 60.03 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD FQDYMIE GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAVETAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
VLV+NPKKLEPRS+LC FVGYPKETRGGLF+DP+ENRV VSTNATFLEEDH+R+H PRSK+VL+E ++ +D S+ V + +TS Q SQ L
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
Query: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
MPRRSGRVV QP+RY+GL ET VV PDD EDPL+Y AM DVDKD+W+KAMD EMESMYFN + ELVD P+GVKPIGCKWIYKRKR
Subjt: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
Query: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
GVD KSI IL +I +YDYE+WQMDVKTAFLNG L+E+I+M QP+GFI QGQEQKVC+L+RSIYGLKQASRSWNI FD AI
Subjt: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
Query: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
KSYGFDQNV+EPCVYKK VAFLV+YVD ILL GN+V +LTDVK WLA+QFQMKDLGEAQYVL
Subjt: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
Query: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
GS MY MLCTRPDICYAVGIV RYQ N GLDH VK +LKYLRRTR+Y LVYG DLILTGYT
Subjt: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
Query: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
R ST + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| KAA0062410.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-206 | 63.19 | Show/hide |
Query: EFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTHVLV
+F++Y E L PG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAV+TAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P HVLV
Subjt: EFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTHVLV
Query: SNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELGMPR
+NPKKLEPRS+LC F+GYPKETRGGLF+DP+ENRV + TNATFLEEDH+RDH P+SK+VLNE D +D S+ V + +TS Q SQ L MPR
Subjt: SNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELGMPR
Query: RSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDGKSIEILSAIVAY
RSGR V QP+ Y+GL ET VV PDD EDPL+Y A DVDKD+W+KAMD +MESMYFN M ELVD P+GVKPIGCKWIYKRK+ GKSI IL +I +
Subjt: RSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDGKSIEILSAIVAY
Query: YDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILL
YDYE+WQMDVKTAFLN L+E+I+M QP+GFI QGQEQKVC+L++SIYGLKQASRSWNI FD AIKSYGFDQNV+EPCVYKK VAFLV+YVD ILL
Subjt: YDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILL
Query: NGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDH
GN+V +LTDVK WLA+QFQMKDLGE QYVL GS MY MLCTRPDICYAVGIV RYQ N GLDH
Subjt: NGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDH
Query: RDTVKAILKYLRRTRNYNLVYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
TVK I KYLRRTR+Y LVY DLILTGYT R ST R + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: RDTVKAILKYLRRTRNYNLVYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 2.3e-211 | 60.33 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD FQDYMIE GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAVETAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
VLV+NPKKLEPRS+LC FVGYPKETRGGLF+DPKENRV VSTNATFLEEDH+R+H PRSK+VL+E ++ +D S+ V + +TS Q SQ L
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
Query: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
MPRRSGRVV QP+RY+GL ET VV PDD EDPL+Y AM DVDKD+W+KAMD EMESMYFN + ELVD P+GVKPIGCKWIYKRKR
Subjt: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
Query: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
GVD KSI IL +I +YDYE+WQMDVKTAFLNG L+E+I+M QP+GFI QGQEQKVC+L+RSIYGLKQASRSWNI FD AI
Subjt: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
Query: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
KSYGFDQNV+EPCVYKK VAFLV+YVD ILL GN+V +LTDVK WLA+QFQMKDLGE QYVL
Subjt: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
Query: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
GS MY MLCTRPDICYAVGIV RYQ N GLDH VK ILKYLRRTR+Y LVYG DLILTGYT
Subjt: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
Query: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
R ST R + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| A0A5A7TWB9 Gag/pol protein | 1.3e-206 | 58.11 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD +FQ+Y++E GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAVYILN VPSKSV ETP +LW+GRKGSL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKE---EFIDGASTSTSVVDPSTSSQI-RSQ
VL +NPKKLEPRSKLCLFVGYPK TRGG FYDPK+N+V VSTNATFLEEDH+R+H PRSKIVLNE+ ++ E ++ S T VV +S++ + Q
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKE---EFIDGASTSTSVVDPSTSSQI-RSQ
Query: ELGMPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDG------
L PRRSGRV P RYM L ET V D D EDPLT+ AM DVDKDEWIKAM+ E+ESMYFN + +LVDQPDGVKPIGCKWIYKRKRG DG
Subjt: ELGMPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDG------
Query: --------------------------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFD
KSI IL +I AY+DYE+WQMDVKTAFLNG L+ETIYM QP+GFI GQEQK+C+L+RSIYGLKQASRSWNI FD
Subjt: --------------------------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFD
Query: EAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------
AIKSYGFDQ V+EPCVYK+ ++K+VAFLV+YVD ILL GN++ LTD+K+WLA+QFQMKDLGEAQ+VL
Subjt: EAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------
Query: ---------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILT
GS MY MLCTRPDICYAVGIV RYQ N GL H VK ILKYLRRTR+Y LVYG DLILT
Subjt: ---------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILT
Query: GYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
GYT R ST + IL + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: GYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| A0A5A7TZD0 Gag/pol protein | 6.8e-211 | 60.03 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD FQDYMIE GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAVETAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
VLV+NPKKLEPRS+LC FVGYPKETRGGLF+DP+ENRV VSTNATFLEEDH+R+H PRSK+VL+E ++ +D S+ V + +TS Q SQ L
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
Query: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
MPRRSGRVV QP+RY+GL ET VV PDD EDPL+Y AM DVDKD+W+KAMD EMESMYFN + ELVD P+GVKPIGCKWIYKRKR
Subjt: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
Query: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
GVD KSI IL +I +YDYE+WQMDVKTAFLNG L+E+I+M QP+GFI QGQEQKVC+L+RSIYGLKQASRSWNI FD AI
Subjt: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
Query: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
KSYGFDQNV+EPCVYKK VAFLV+YVD ILL GN+V +LTDVK WLA+QFQMKDLGEAQYVL
Subjt: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
Query: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
GS MY MLCTRPDICYAVGIV RYQ N GLDH VK +LKYLRRTR+Y LVYG DLILTGYT
Subjt: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
Query: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
R ST + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| A0A5A7UYE8 Gag/pol protein | 6.8e-211 | 60.03 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
MD FQDYMIE GI SQLSAPG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAVETAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P H
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
VLV+NPKKLEPRS+LC FVGYPKETRGGLF+DP+ENRV VSTNATFLEEDH+R+H PRSK+VL+E ++ +D S+ V + +TS Q SQ L
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELG
Query: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
MPRRSGRVV QP+RY+GL ET VV PDD EDPL+Y AM DVDKD+W+KAMD EMESMYFN + ELVD P+GVKPIGCKWIYKRKR
Subjt: MPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKR-------------
Query: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
GVD KSI IL +I +YDYE+WQMDVKTAFLNG L+E+I+M QP+GFI QGQEQKVC+L+RSIYGLKQASRSWNI FD AI
Subjt: ---------GVDG----------KSIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAI
Query: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
KSYGFDQNV+EPCVYKK VAFLV+YVD ILL GN+V +LTDVK WLA+QFQMKDLGEAQYVL
Subjt: KSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL----------------------------------
Query: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
GS MY MLCTRPDICYAVGIV RYQ N GLDH VK +LKYLRRTR+Y LVYG DLILTGYT
Subjt: ------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYT
Query: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
R ST + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: ----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| A0A5D3DS50 Gag/pol protein | 1.0e-206 | 63.19 | Show/hide |
Query: EFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTHVLV
+F++Y E L PG PQ+NG+SERRNRTLLDMVRSMMSYA+LP SFWGYAV+TAV+ILNNVPSKSV ETPFELW GRK SL HFRIWG P HVLV
Subjt: EFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCETPFELWSGRKGSLHHFRIWGYPTHVLV
Query: SNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELGMPR
+NPKKLEPRS+LC F+GYPKETRGGLF+DP+ENRV + TNATFLEEDH+RDH P+SK+VLNE D +D S+ V + +TS Q SQ L MPR
Subjt: SNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIR-SQELGMPR
Query: RSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDGKSIEILSAIVAY
RSGR V QP+ Y+GL ET VV PDD EDPL+Y A DVDKD+W+KAMD +MESMYFN M ELVD P+GVKPIGCKWIYKRK+ GKSI IL +I +
Subjt: RSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRKRGVDGKSIEILSAIVAY
Query: YDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILL
YDYE+WQMDVKTAFLN L+E+I+M QP+GFI QGQEQKVC+L++SIYGLKQASRSWNI FD AIKSYGFDQNV+EPCVYKK VAFLV+YVD ILL
Subjt: YDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILL
Query: NGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDH
GN+V +LTDVK WLA+QFQMKDLGE QYVL GS MY MLCTRPDICYAVGIV RYQ N GLDH
Subjt: NGNEVEFLTDVKRWLASQFQMKDLGEAQYVL-------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDH
Query: RDTVKAILKYLRRTRNYNLVYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
TVK I KYLRRTR+Y LVY DLILTGYT R ST R + L + WRS ++GCI DSTMEAEYVA ++ ++
Subjt: RDTVKAILKYLRRTRNYNLVYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.0e-51 | 22.64 | Show/hide |
Query: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCE---TPFELWSGRKGSLHHFRIWGY
+ E + + +++GI+ L+ P PQ NG+SER RT+ + R+M+S A+L SFWG AV TA Y++N +PS+++ + TP+E+W +K L H R++G
Subjt: MDTEFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVCE---TPFELWSGRKGSLHHFRIWGY
Query: PTHVLVSNPK-KLEPRSKLCLFVGYPKETRGGLFYD-------------------------------------------PKENRVLVST----------N
+V + N + K + +S +FVGY E G +D P ++R ++ T N
Subjt: PTHVLVSNPK-KLEPRSKLCLFVGYPKETRGGLFYD-------------------------------------------PKENRVLVST----------N
Query: ATFLEE-------------------------------DHVRDHLPRSKIVLNEMDEDIKEEFID---GASTSTSVVDPSTSSQIRSQELGMP--------
FL++ ++D +K LNE + +++ ++ G+ + T+ ++ + P
Subjt: ATFLEE-------------------------------DHVRDHLPRSKIVLNEMDEDIKEEFID---GASTSTSVVDPSTSSQIRSQELGMP--------
Query: --RRSGRVVRQP-----DRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRK---------
RRS R+ +P + L + + A + P ++D DK W +A++ E+ + N + +P+ + +W++ K
Subjt: --RRSGRVVRQP-----DRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQPDGVKPIGCKWIYKRK---------
Query: -------RGVDGK----------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIM
RG K S + ++V Y+ +V QMDVKTAFLNG L E IYM P+G VC+L+++IYGLKQA+R W +
Subjt: -------RGVDGK----------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIM
Query: FDEAIKSYGFDQNVEEPCVY---KKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQY----------------------------
F++A+K F + + C+Y K +++ + ++++YVD +++ ++ + + KR+L +F+M DL E ++
Subjt: FDEAIKSYGFDQNVEEPCVY---KKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQY----------------------------
Query: ---------------------------------VLGSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYTR
++G MY+MLCTRPD+ AV I+ RY + +K +L+YL+ T + L++ L +
Subjt: ---------------------------------VLGSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVYGGGDLILTGYTR
Query: ISTFRPIRILGNPLWSPS--------FEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKLFGL
I + G+ + S F++ ++ + S+ EAEY+AL ++ R+ L
Subjt: ISTFRPIRILGNPLWSPS--------FEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKLFGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-84 | 30.62 | Show/hide |
Query: EFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVC-ETPFELWSGRKGSLHHFRIWGYP--TH
EF++Y GI + + PG PQ NG++ER NRT+++ VRSM+ A+LP SFWG AV+TA Y++N PS + E P +W+ ++ S H +++G H
Subjt: EFQDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSVC-ETPFELWSGRKGSLHHFRIWGYP--TH
Query: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIRSQELG-
V KL+ +S C+F+GY E G +DP + +V+ S + F E VR +M E +K I T S + TS++ + E+
Subjt: VLVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEEDHVRDHLPRSKIVLNEMDEDIKEEFIDGASTSTSVVDPSTSSQIRSQELG-
Query: MPRRSGRVVRQPDRY-MGLAE-----------------------------TSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQ
+ G V+ Q ++ G+ E T V DD +P + + +K++ +KAM +EMES+ N +LV+
Subjt: MPRRSGRVVRQPDRY-MGLAE-----------------------------TSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMRELVDQ
Query: PDGVKPIGCKWIYKRKRGVDGK--------------------------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQG
P G +P+ CKW++K K+ D K SI + ++ A D EV Q+DVKTAFL+G L+E IYM+QP+GF G
Subjt: PDGVKPIGCKWIYKRKRGVDGK--------------------------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQG
Query: QEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVY-KKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL---
++ VC+L++S+YGLKQA R W + FD +KS + + +PCVY K+ + L++YVD +L+ G + + +K L+ F MKDLG AQ +L
Subjt: QEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVY-KKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL---
Query: -------------------------------------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHR
GS MY M+CTRPDI +AVG+V R+ N G +H
Subjt: -------------------------------------------------------------------GSPMYVMLCTRPDICYAVGIVGRYQPNQGLDHR
Query: DTVKAILKYLRRTRNYNLVYGGGDLILTGYTRISTFRPI-RILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKLFGL
+ VK IL+YLR T L +GG D IL GYT I + + +F + S + C+ ST EAEY+A ++ +++ L
Subjt: DTVKAILKYLRRTRNYNLVYGGGDLILTGYTRISTFRPI-RILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKLFGL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 4.5e-18 | 26.69 | Show/hide |
Query: MDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEF
MDV TAFLN +DE IY+ QP GF+ + V L+ +YGLKQA WN + +K GF ++ E +Y ++ ++ +YVD +L+ +
Subjt: MDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEF
Query: LTDVKRWLASQFQMKDLGEAQYVLG-----------------------------------------SPMY-------------------VMLCT---RPD
VK+ L + MKDLG+ LG P++ ++ C RPD
Subjt: LTDVKRWLASQFQMKDLGEAQYVLG-----------------------------------------SPMY-------------------VMLCT---RPD
Query: ICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVY-GGGDLILTGY
I Y V ++ R+ H ++ + +L+YL TR+ L Y G L LT Y
Subjt: ICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNLVY-GGGDLILTGY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-39 | 22.11 | Show/hide |
Query: DYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSV-CETPFELWSGRKGSLHHFRIWG---YPTHVL
+Y + GI+ S P P+ NG+SER++R +++ +++S+A +P ++W YA AVY++N +P+ + E+PF+ G + R++G YP +
Subjt: DYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSV-CETPFELWSGRKGSLHHFRIWG---YPTHVL
Query: VSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLE---------------EDHVRDH----------------LP--------------
N KL+ +S+ C+F+GY L + +R+ +S + F E ++ R+ LP
Subjt: VSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLE---------------EDHVRDH----------------LP--------------
Query: --------RSKIVLNEMDEDIKEEFIDG-------------------------ASTSTSVVDPSTSSQIR-SQELGMPRRSGRVVRQPDRYMGLAETSVV
S++ + +D F +S +TS +P+ S + +Q L P +S P + TS
Subjt: --------RSKIVLNEMDEDIKEEFIDG-------------------------ASTSTSVVDPSTSSQIR-SQELGMPRRSGRVVRQPDRYMGLAETSVV
Query: AP--------------DDDCEDPLTYDHAM------------------------------VDVDKDE-WIKAMDQEMESMYFNCMRELVDQPDG-VKPIG
P +++ + PL H+M + KDE W AM E+ + N +LV P V +G
Subjt: AP--------------DDDCEDPLTYDHAM------------------------------VDVDKDE-WIKAMDQEMESMYFNCMRELVDQPDG-VKPIG
Query: CKWIYKRKRGVDGK--------------------------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRL
C+WI+ +K DG SI I+ + + + Q+DV AFL G L + +YM QP GFI + + VC+L
Subjt: CKWIYKRKRGVDGK--------------------------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGFIAQGQEQKVCRL
Query: HRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVLG-----------
+++YGLKQA R+W + + + GF +V + ++ K++ ++++YVD IL+ GN+ L + L+ +F +KD E Y LG
Subjt: HRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVLG-----------
Query: ----------------------------SP----------------------MYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNL
SP + + TRPDI YAV + ++ +H +K IL+YL T N+ +
Subjt: ----------------------------SP----------------------MYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAILKYLRRTRNYNL
Query: -VYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKL
+ G L L Y+ +ST I LG+ W S K Q+G ++ S+ EAEY ++ + ++
Subjt: -VYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-38 | 22.53 | Show/hide |
Query: QDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSV-CETPFELWSGRKGSLHHFRIWG---YPTHV
+DY+ + GI+ S P P+ NG+SER++R +++M +++S+A +P ++W YA AVY++N +P+ + ++PF+ G+ + +++G YP +
Subjt: QDYMIERGITSQLSAPGMPQKNGISERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKSV-CETPFELWSGRKGSLHHFRIWG---YPTHV
Query: LVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEE---------------------------------------------DHV----
N KLE +SK C F+GY L R+ S + F E H+
Subjt: LVSNPKKLEPRSKLCLFVGYPKETRGGLFYDPKENRVLVSTNATFLEE---------------------------------------------DHV----
Query: ---------------RDHLPRSKI---------------------------------VLNEMDED-----------------IKEEFIDGASTSTSVVD-
+LP S I +LN + + I I STS S +
Subjt: ---------------RDHLPRSKI---------------------------------VLNEMDED-----------------IKEEFIDGASTSTSVVD-
Query: PSTSS----------------QIRSQ----ELGMPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMREL
PS+SS Q+ +Q M R+ +R+P++ A TS+ A +P T AM D D W +AM E+ + N +L
Subjt: PSTSS----------------QIRSQ----ELGMPRRSGRVVRQPDRYMGLAETSVVAPDDDCEDPLTYDHAMVDVDKDEWIKAMDQEMESMYFNCMREL
Query: V-DQPDGVKPIGCKWIYKRKRGVDGK--------------------------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGF
V P V +GC+WI+ +K DG SI I+ + + + Q+DV AFL G L + +YM QP GF
Subjt: V-DQPDGVKPIGCKWIYKRKRGVDGK--------------------------------SIEILSAIVAYYDYEVWQMDVKTAFLNGKLDETIYMDQPKGF
Query: IAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL
+ + + VCRL ++IYGLKQA R+W + + + GF ++ + ++ +++ ++++YVD IL+ GN+ L L+ +F +K+ + Y L
Subjt: IAQGQEQKVCRLHRSIYGLKQASRSWNIMFDEAIKSYGFDQNVEEPCVYKKTVDKTVAFLVMYVDAILLNGNEVEFLTDVKRWLASQFQMKDLGEAQYVL
Query: G---------------------------------------SP----------------------MYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAI
G SP + + TRPD+ YAV + +Y DH + +K +
Subjt: G---------------------------------------SP----------------------MYVMLCTRPDICYAVGIVGRYQPNQGLDHRDTVKAI
Query: LKYLRRTRNYNL-VYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKL
L+YL T ++ + + G L L Y+ +ST I LG+ W S K Q+G ++ S+ EAEY ++ + +L
Subjt: LKYLRRTRNYNL-VYGGGDLILTGYT----------RISTFRPIRILGNPLWSPSFEWRSCSMAKHQRGCIIDSTMEAEYVALVKSQRKL
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