; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002110 (gene) of Snake gourd v1 genome

Gene IDTan0002110
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:71712271..71713080
RNA-Seq ExpressionTan0002110
SyntenyTan0002110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580574.1 hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5374.19Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------
        MSAVC+T  CIS    GRPPRAAYINL NW D D E  KSAIPR  RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRCL KVKEKLGQRKR       
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------

Query:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
            N+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

KAG7017326.1 hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-5474.19Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------
        MSAVC+T  CIS    GRPPRAAYINL NW DSD E  KSAIPR  RRVPV DGVSCRQ+YLRSYKFSTKESV EKTRRCL KVKEKLGQRKR       
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------

Query:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
            N+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

XP_022934190.1 uncharacterized protein LOC111441435 [Cucurbita moschata]2.8e-5474.84Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------
        MSAVC+T  CIS    GRPPRAAYINL NW DSD E  KSAIPR  RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRCL KVKEKLGQRKR       
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------

Query:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
            N+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

XP_022983914.1 uncharacterized protein LOC111482393 [Cucurbita maxima]7.5e-5575.48Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRK--------
        MSAVC+T  CIS    GRPPRAAYINL NW DSD E  KSAIPR  RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRCL KVKEKLGQRK        
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRK--------

Query:  ---RNQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
           RN+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  ---RNQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

XP_023528009.1 uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]7.5e-5575.48Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------
        MSAVC+T  CIS    GRPPRAAYINL NW DSD E  KSAIPR  RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRCL KVKEKLGQRKR       
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------

Query:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
            N+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

TrEMBL top hitse value%identityAlignment
A0A1S3B628 uncharacterized protein LOC1034864229.5e-4867.9Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFS-TKESVAEKTRRCLGKVKEKLGQRKR------
        MSAVC+TK CIS A   R PRA YINL NW DS+ EI KSA+P+  RRV V DGVSCRQMYLRSYKFS  KESV EKT++CL KVKEKLGQRKR      
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFS-TKESVAEKTRRCLGKVKEKLGQRKR------

Query:  ----------NQNRKRKR---KCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRN
                  N NRKRK+   KCLIW+KMK+FSCSF++FGIFRRILSCAA+IDVVEQS GRN
Subjt:  ----------NQNRKRKR---KCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRN

A0A5D3DNA8 Uncharacterized protein9.5e-4867.9Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFS-TKESVAEKTRRCLGKVKEKLGQRKR------
        MSAVC+TK CIS A   R PRA YINL NW DS+ EI KSA+P+  RRV V DGVSCRQMYLRSYKFS  KESV EKT++CL KVKEKLGQRKR      
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFS-TKESVAEKTRRCLGKVKEKLGQRKR------

Query:  ----------NQNRKRKR---KCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRN
                  N NRKRK+   KCLIW+KMK+FSCSF++FGIFRRILSCAA+IDVVEQS GRN
Subjt:  ----------NQNRKRKR---KCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRN

A0A6J1CV59 uncharacterized protein LOC1110150721.3e-4974.83Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKRN---QNR
        MS++C+   CIS A  GRPPR AYINL++W DSD EIAKSA  RA RRV VADGVSCRQMYLRSYKFS KESV EKTRRCLG+VKEK+G+RKR    ++R
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKRN---QNR

Query:  KRKRKCLI--WRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRN
         RKRKCLI  WRKMKEFSCS +LFGIFRRILSCAAS+DVVE S+GRN
Subjt:  KRKRKCLI--WRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRN

A0A6J1F6Z2 uncharacterized protein LOC1114414351.4e-5474.84Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------
        MSAVC+T  CIS    GRPPRAAYINL NW DSD E  KSAIPR  RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRCL KVKEKLGQRKR       
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKR-------

Query:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
            N+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  ----NQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

A0A6J1J8Y5 uncharacterized protein LOC1114823933.6e-5575.48Show/hide
Query:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRK--------
        MSAVC+T  CIS    GRPPRAAYINL NW DSD E  KSAIPR  RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRCL KVKEKLGQRK        
Subjt:  MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRK--------

Query:  ---RNQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN
           RN+NR RKRKC IWRKMK+FSCSFVLF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  ---RNQNRKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein1.9e-0835.04Show/hide
Query:  PRAAYINLYNWKDSDGEIAKSAIPRASR-RVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQR-KRNQNRKRKRKCLIWRKMKEFSCSFV
        P   Y NLY W  ++ E  +S     S+ R  V D +SCRQMYLRSY FST+E+  +        V  +  Q   R    ++K      R  K +SC   
Subjt:  PRAAYINLYNWKDSDGEIAKSAIPRASR-RVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQR-KRNQNRKRKRKCLIWRKMKEFSCSFV

Query:  LFGIFRRILSCAASIDV
        +F + R+ LSCA++  V
Subjt:  LFGIFRRILSCAASIDV

AT5G02640.1 unknown protein7.8e-1839.13Show/hide
Query:  MSAVCSTKCCISAAGGG---RPPRAAYINLYNWKDSDGEIAKSAIPRASRRVP---VADGVSCRQMYLRSYKFSTK--ESVAEKT-----RRCLGKVKEK
        M++VC + C   A       RP RA+Y+NLY W +SD E  +S   R    +P   V D +SCRQMYLRSY FS +  ES +EK        CLG+VK  
Subjt:  MSAVCSTKCCISAAGGG---RPPRAAYINLYNWKDSDGEIAKSAIPRASRRVP---VADGVSCRQMYLRSYKFSTK--ESVAEKT-----RRCLGKVKEK

Query:  LGQRKRNQN------------RKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVE
           R++++             R+R  K  + RK K+     V+  IFRR+LSCAA++DVV+
Subjt:  LGQRKRNQN------------RKRKRKCLIWRKMKEFSCSFVLFGIFRRILSCAASIDVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCTGTTTGTTCAACGAAGTGCTGCATAAGCGCCGCGGGTGGTGGCCGTCCGCCGCGCGCAGCCTACATCAACCTCTACAACTGGAAGGATTCCGACGGCGAGAT
CGCGAAATCGGCGATTCCGAGAGCGAGCCGCCGAGTTCCGGTAGCCGATGGAGTATCGTGCAGGCAAATGTACTTGAGGAGCTACAAATTCTCGACGAAGGAATCGGTGG
CGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAATCAGAATCGGAAGAGGAAGAGGAAGTGTTTGATTTGGAGGAAGATGAAG
GAATTTTCGTGCAGTTTCGTTCTGTTTGGAATTTTTCGAAGGATTTTGTCATGTGCTGCGAGTATTGATGTTGTGGAGCAGAGTAGTGGAAGAAATGGTAATCGATTTTG
A
mRNA sequenceShow/hide mRNA sequence
CAATTTTTTCAGCTTCTATTTCACGTACATGTAATTGAGCATTCCTCCAAATTTTCTTCAGTATAAAACAAACGAATCAATAAGAACAGTGTTCATCTCTCAGATCCTTC
AAAATCAAGCTTCTGCAAATGCTCCAAATCCTCCTCGCCGTTCTCCGCCATTAACGATCGTCAAAAAAAGCTTCGAGGAAAGAAATGAGCGCTGTTTGTTCAACGAAGTG
CTGCATAAGCGCCGCGGGTGGTGGCCGTCCGCCGCGCGCAGCCTACATCAACCTCTACAACTGGAAGGATTCCGACGGCGAGATCGCGAAATCGGCGATTCCGAGAGCGA
GCCGCCGAGTTCCGGTAGCCGATGGAGTATCGTGCAGGCAAATGTACTTGAGGAGCTACAAATTCTCGACGAAGGAATCGGTGGCGGAGAAAACGAGGAGGTGTTTGGGG
AAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAATCAGAATCGGAAGAGGAAGAGGAAGTGTTTGATTTGGAGGAAGATGAAGGAATTTTCGTGCAGTTTCGTTCTGTT
TGGAATTTTTCGAAGGATTTTGTCATGTGCTGCGAGTATTGATGTTGTGGAGCAGAGTAGTGGAAGAAATGGTAATCGATTTTGAGTTTGAAATTTGCTCTGTTCTTTCT
TCTTCTTCTTCTTCTTCTGTAATTGAATTTGATTTGGCTTTTGTTTGTGCTAAGTTGTTTTTTCACTAGTTTTTAGCATGAACTTGCTTTCTCTTTAACACATTGAAATT
CATGAAGAGGAATTGGATGATTTCTCTCCCTCTCTCTAGC
Protein sequenceShow/hide protein sequence
MSAVCSTKCCISAAGGGRPPRAAYINLYNWKDSDGEIAKSAIPRASRRVPVADGVSCRQMYLRSYKFSTKESVAEKTRRCLGKVKEKLGQRKRNQNRKRKRKCLIWRKMK
EFSCSFVLFGIFRRILSCAASIDVVEQSSGRNGNRF