; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002116 (gene) of Snake gourd v1 genome

Gene IDTan0002116
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP synthase subunit beta, chloroplastic
Genome locationLG10:27683212..27683694
RNA-Seq ExpressionTan0002116
SyntenyTan0002116
Gene Ontology termsGO:0042776 - mitochondrial ATP synthesis coupled proton transport (biological process)
GO:0005753 - mitochondrial proton-transporting ATP synthase complex (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
IPR020003 - ATPase, alpha/beta subunit, nucleotide-binding domain, active site
IPR024034 - ATPase, F1/V1 complex, beta/alpha subunit, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAX57072.1 ATP synthase beta subunit, partial [Phyllanthus lokohensis]1.9e-5190.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTDLA ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARA+K
Subjt:  AILGLDELFEEDRLTVARARK

AEP25177.1 ATP synthase beta subunit, partial [Physena madagascariensis]1.9e-5189.26Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTK+G+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQPHIVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLT+ARARK
Subjt:  AILGLDELFEEDRLTVARARK

AYE20248.1 ATP synthase subunit beta, partial [Aphyllon robbinsii]1.9e-5190.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG+LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATTILSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

OTF84501.1 putative ATP synthase subunit beta protein [Helianthus annuus]5.0e-5269.09Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVG+EHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARKDLRSFLRCGNYHDERDILNG------VMSTCLFWCRHISYQNEL
        AILGLDEL EEDRLTVARARK   S+    +Y +  ++ NG       ++ C+     I + +E+
Subjt:  AILGLDELFEEDRLTVARARKDLRSFLRCGNYHDERDILNG------VMSTCLFWCRHISYQNEL

YP_009568986.1 ATP synthase CF1 beta subunit [Physena sessiliflora]1.9e-5189.26Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTK+G+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQPHIVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLT+ARARK
Subjt:  AILGLDELFEEDRLTVARARK

TrEMBL top hitse value%identityAlignment
A0A1U8HZN3 H(+)-transporting two-sector ATPase5.4e-5290.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDELFEEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

A0A1Y3BU36 H(+)-transporting two-sector ATPase2.4e-5269.09Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVG+EHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARKDLRSFLRCGNYHDERDILNG------VMSTCLFWCRHISYQNEL
        AILGLDEL EEDRLTVARARK   S+    +Y +  ++ NG       ++ C+     I + +E+
Subjt:  AILGLDELFEEDRLTVARARKDLRSFLRCGNYHDERDILNG------VMSTCLFWCRHISYQNEL

A0A411JUV6 ATP synthase subunit beta9.1e-5289.26Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTK+G+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQPHIVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLT+ARARK
Subjt:  AILGLDELFEEDRLTVARARK

G4WNV8 ATP synthase subunit beta (Fragment)9.1e-5289.26Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTK+G+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQPHIVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLT+ARARK
Subjt:  AILGLDELFEEDRLTVARARK

Q4VMZ5 ATP synthase subunit beta (Fragment)9.1e-5290.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTDLA ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARA+K
Subjt:  AILGLDELFEEDRLTVARARK

SwissProt top hitse value%identityAlignment
Q3V527 ATP synthase subunit beta, chloroplastic1.2e-5389.26Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

Q85V27 ATP synthase subunit beta, chloroplastic5.5e-5490.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

Q95AF8 ATP synthase subunit beta, chloroplastic9.4e-5490.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

Q95DR6 ATP synthase subunit beta, chloroplastic1.2e-5389.26Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

Q9TMU1 ATP synthase subunit beta, chloroplastic9.4e-5490.08Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTKEG+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET QKVKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

Arabidopsis top hitse value%identityAlignment
AT1G78900.1 vacuolar ATP synthase subunit A9.2e-0426.5Show/hide
Query:  KEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQ--------KVKQTLQRYKELQDIIAIL
        + G++T + A+  P  D +D   + T + +     L + LA +  +PS++ L S S   +     E  YE           K ++ LQR  +L +I+ ++
Subjt:  KEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQ--------KVKQTLQRYKELQDIIAIL

Query:  GLDELFEEDRLTVARAR
        G D L E D++T+  A+
Subjt:  GLDELFEEDRLTVARAR

AT5G08670.1 ATP synthase alpha/beta family protein6.3e-4572.73Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        +G LQERIT+TK+G+ITS+QAIYVPADDLTD A ATTF HLDATT+LSR ++  GIYP++DPLDSTS ML PHI+GEEHY T + V++ LQ YK LQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILG+DEL E+D+LTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

AT5G08680.1 ATP synthase alpha/beta family protein6.3e-4572.73Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        +G LQERIT+TK+G+ITS+QAIYVPADDLTD A ATTF HLDATT+LSR ++  GIYP++DPLDSTS ML PHI+GEEHY T + V++ LQ YK LQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILG+DEL E+D+LTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

AT5G08690.1 ATP synthase alpha/beta family protein6.3e-4572.73Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        +G LQERIT+TK+G+ITS+QAIYVPADDLTD A ATTF HLDATT+LSR ++  GIYP++DPLDSTS ML PHI+GEEHY T + V++ LQ YK LQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILG+DEL E+D+LTVARARK
Subjt:  AILGLDELFEEDRLTVARARK

ATCG00480.1 ATP synthase subunit beta3.3e-5488.43Show/hide
Query:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII
        MG LQERITSTK+G+ITSIQA+YVPADDLTD A ATTF HLDATT+LSRGLAAKGIYP++DPLDSTSTMLQP IVGEEHYET Q+VKQTLQRYKELQDII
Subjt:  MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDII

Query:  AILGLDELFEEDRLTVARARK
        AILGLDEL EEDRLTVARARK
Subjt:  AILGLDELFEEDRLTVARARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGGCCATAACTTCTATTCAAGCAATTTATGTACCTGCAGACGATTTGACCGATCTTGCTCATGCCACTAC
ATTTACACATTTGGATGCTACTACCATACTATCAAGAGGATTAGCTGCCAAAGGTATCTATCCATCACTAGATCCTTTAGATTCAACGTCAACTATGCTACAACCTCATA
TCGTTGGTGAAGAACATTATGAAACTGTGCAAAAAGTTAAACAAACTTTACAACGTTACAAAGAATTGCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATTCGAA
GAGGATCGCTTAACCGTAGCACGAGCACGAAAAGATTTAAGGTCATTTCTACGATGCGGTAATTATCACGACGAAAGAGATATTTTAAATGGGGTTATGTCGACATGCCT
ATTTTGGTGTCGACATATATCTTACCAAAATGAGTTATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGGCCATAACTTCTATTCAAGCAATTTATGTACCTGCAGACGATTTGACCGATCTTGCTCATGCCACTAC
ATTTACACATTTGGATGCTACTACCATACTATCAAGAGGATTAGCTGCCAAAGGTATCTATCCATCACTAGATCCTTTAGATTCAACGTCAACTATGCTACAACCTCATA
TCGTTGGTGAAGAACATTATGAAACTGTGCAAAAAGTTAAACAAACTTTACAACGTTACAAAGAATTGCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATTCGAA
GAGGATCGCTTAACCGTAGCACGAGCACGAAAAGATTTAAGGTCATTTCTACGATGCGGTAATTATCACGACGAAAGAGATATTTTAAATGGGGTTATGTCGACATGCCT
ATTTTGGTGTCGACATATATCTTACCAAAATGAGTTATGCTGA
Protein sequenceShow/hide protein sequence
MGFLQERITSTKEGAITSIQAIYVPADDLTDLAHATTFTHLDATTILSRGLAAKGIYPSLDPLDSTSTMLQPHIVGEEHYETVQKVKQTLQRYKELQDIIAILGLDELFE
EDRLTVARARKDLRSFLRCGNYHDERDILNGVMSTCLFWCRHISYQNELC