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Tan0002173 (gene) of Snake gourd v1 genome

Gene IDTan0002173
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF4216 domain-containing protein
Genome locationLG08:72150564..72151827
RNA-Seq ExpressionTan0002173
SyntenyTan0002173
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026270.1 hypothetical protein E6C27_scaffold19G002720 [Cucumis melo var. makuwa]2.3e-1853.19Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN
        MQSYI VCVRQQI ++Y +WKEV  ELKDKI+D + ++  D S R+TLW +ARKG+NN+YFDD T+ C  RI  L A      +   A+GSK++
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN

KAA0040475.1 proteasome-associated protein ECM29-like protein isoform X1 [Cucumis melo var. makuwa]9.7e-1757.14Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA
        +QSYI VCVRQQI + Y +WKEV  ELKDKI+D + ++  D   R+TLW +ARKG+NN+YFDD T+ C  RI  L A
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA

KAA0065358.1 transposase [Cucumis melo var. makuwa]2.6e-1757.14Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA
        MQSYI VCV QQI ++Y +WKEVP ELKDKI+D + ++  D S R+TLW +A+KG+NN+YFD+ T+ C  RI  L A
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA

TYK08115.1 hypothetical protein E5676_scaffold265G002840 [Cucumis melo var. makuwa]4.4e-1755.81Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELA---------EDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA
        MQSYI VCVRQQI ++Y +WKEVP ELKDKI+D + + A          D S R+TLW +ARKGKNN+YFDD T+ C  +I  L A
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELA---------EDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA

TYK30686.1 uncharacterized protein E5676_scaffold343G00010 [Cucumis melo var. makuwa]2.3e-1853.19Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN
        MQSYI VCVRQQI ++Y +WKEV  ELKDKI+D + ++  D S R+TLW +ARKG+NN+YFDD T+ C  RI  L A      +   A+GSK++
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN

TrEMBL top hitse value%identityAlignment
A0A5A7SJ90 DUF4216 domain-containing protein1.1e-1853.19Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN
        MQSYI VCVRQQI ++Y +WKEV  ELKDKI+D + ++  D S R+TLW +ARKG+NN+YFDD T+ C  RI  L A      +   A+GSK++
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN

A0A5A7TGD1 Proteasome-associated protein ECM29-like protein isoform X14.7e-1757.14Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA
        +QSYI VCVRQQI + Y +WKEV  ELKDKI+D + ++  D   R+TLW +ARKG+NN+YFDD T+ C  RI  L A
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA

A0A5A7VCJ3 Transposase1.2e-1757.14Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA
        MQSYI VCV QQI ++Y +WKEVP ELKDKI+D + ++  D S R+TLW +A+KG+NN+YFD+ T+ C  RI  L A
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA

A0A5D3C9F2 Uncharacterized protein2.1e-1755.81Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELA---------EDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA
        MQSYI VCVRQQI ++Y +WKEVP ELKDKI+D + + A          D S R+TLW +ARKGKNN+YFDD T+ C  +I  L A
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELA---------EDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSA

A0A5D3E473 DUF4216 domain-containing protein1.1e-1853.19Show/hide
Query:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN
        MQSYI VCVRQQI ++Y +WKEV  ELKDKI+D + ++  D S R+TLW +ARKG+NN+YFDD T+ C  RI  L A      +   A+GSK++
Subjt:  MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHL---AIGSKDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTTATATTGAAGTTTGCGTTAGGCAACAAATTTCATTAAGTTACAAGACTTGGAAAGAAGTTCCCCAAGAACTGAAAGATAAAATTTTTGATACTGTAGAGGA
ATTGGCGGAAGATCCTTCCACTCGTGCAACCTTATGGATACAGGCACGAAAAGGAAAAAATAATGAATACTTCGATGATGAAACCAAACAATGTGTTGGTCGAATCGTAA
CATTAAGCGCGCTTGGAACTCCATGCCATCTAGCAATAGGATCAAAGGATAATGTGGTTGTTGTAGGCACAATGTACACGTCTGACGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGTTATATTGAAGTTTGCGTTAGGCAACAAATTTCATTAAGTTACAAGACTTGGAAAGAAGTTCCCCAAGAACTGAAAGATAAAATTTTTGATACTGTAGAGGA
ATTGGCGGAAGATCCTTCCACTCGTGCAACCTTATGGATACAGGCACGAAAAGGAAAAAATAATGAATACTTCGATGATGAAACCAAACAATGTGTTGGTCGAATCGTAA
CATTAAGCGCGCTTGGAACTCCATGCCATCTAGCAATAGGATCAAAGGATAATGTGGTTGTTGTAGGCACAATGTACACGTCTGACGCTTAA
Protein sequenceShow/hide protein sequence
MQSYIEVCVRQQISLSYKTWKEVPQELKDKIFDTVEELAEDPSTRATLWIQARKGKNNEYFDDETKQCVGRIVTLSALGTPCHLAIGSKDNVVVVGTMYTSDA