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Tan0002177 (gene) of Snake gourd v1 genome

Gene IDTan0002177
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationLG10:28904239..28905727
RNA-Seq ExpressionTan0002177
SyntenyTan0002177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]5.0e-2470.67Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVD  V KLF ++ERGVNP+IP+LAETFR+LNYCR   +GKL CCVPLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
KAA0037618.1 uncharacterized protein E6C27_scaffold277G002790 [Cucumis melo var. makuwa]5.0e-2470.67Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVD  V KLF ++ERGVNP+IP+LAETFR+LNYCR   +GKL CCVPLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
KAA0056623.1 girdin-like [Cucumis melo var. makuwa]4.3e-2368Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVDG V KLF ++ERGVNP+IP+LA+TFR+LNYCR   +GK  CCVPLLYIW+ +H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]1.3e-2470.67Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVDG V KLF ++ERGVNP+IP+LAETFR+LNYCR   +GKL CC+PLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]1.1e-2369.33Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVDG V +LF +IERGV+P+IP+LAETFR+LN+CR    GKL CCVPLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
TrEMBL top hitse value%identityAlignment
A0A5A7T494 Uncharacterized protein2.4e-2470.67Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVD  V KLF ++ERGVNP+IP+LAETFR+LNYCR   +GKL CCVPLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
A0A5A7T5S7 Girdin-like2.4e-2470.67Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVD  V KLF ++ERGVNP+IP+LAETFR+LNYCR   +GKL CCVPLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
A0A5A7UL51 Girdin-like2.1e-2368Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVDG V KLF ++ERGVNP+IP+LA+TFR+LNYCR   +GK  CCVPLLYIW+ +H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
A0A5A7UWQ6 Uncharacterized protein6.4e-2570.67Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVDG V KLF ++ERGVNP+IP+LAETFR+LNYCR   +GKL CC+PLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
A0A5D3C8D9 Girdin-like4.6e-2368Show/hide
Query:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
        L LLALCIYG  ++PKA+GYVDG V KLF ++ERGVNP+IP+LA+TFR+LNY R   +GK  CCVPLLYIW+H+H
Subjt:  LILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNYCRAIKKGKLRCCVPLLYIWMHNH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTCAATGTACCTATTGAGTCAATACGATATGATGAACCAATGATTGCACTACAATGGGCAGAATATGAAGTAGCACTACCTTCTTCTTGTCAAGTCCAATTAGT
TCCTAATGAATTAGGAAGATTGAAGACCATTTGGGAAGGTTTGACACCAGATCGTCGATTTATTCTAATTTTATTGGCTCTATGCATTTATGGGACAACGTTATATCCAA
AGGCAAAAGGGTACGTGGATGGACATGTTGCGAAGTTGTTTGTTAAAATAGAGAGAGGAGTAAACCCAGTCATACCTCTTCTTGCAGAAACCTTCCGAGCACTAAATTAC
TGTAGAGCTATTAAAAAGGGAAAGTTAAGGTGTTGTGTTCCTTTATTATATATTTGGATGCACAACCATTTTAACTTAGTCAATGGGCTTCAGAGCAAACACAAGATGTT
AGAAAGGAATCAAGACCTCGAGCAAGAGAATGTGAAGTTACGTCGAAATGCTAGTCACTTAACTAACCTAACAGCTCAAACCAATAAAAAGCTTGAAGAAGCAGAAAAAC
CCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTCAATGTACCTATTGAGTCAATACGATATGATGAACCAATGATTGCACTACAATGGGCAGAATATGAAGTAGCACTACCTTCTTCTTGTCAAGTCCAATTAGT
TCCTAATGAATTAGGAAGATTGAAGACCATTTGGGAAGGTTTGACACCAGATCGTCGATTTATTCTAATTTTATTGGCTCTATGCATTTATGGGACAACGTTATATCCAA
AGGCAAAAGGGTACGTGGATGGACATGTTGCGAAGTTGTTTGTTAAAATAGAGAGAGGAGTAAACCCAGTCATACCTCTTCTTGCAGAAACCTTCCGAGCACTAAATTAC
TGTAGAGCTATTAAAAAGGGAAAGTTAAGGTGTTGTGTTCCTTTATTATATATTTGGATGCACAACCATTTTAACTTAGTCAATGGGCTTCAGAGCAAACACAAGATGTT
AGAAAGGAATCAAGACCTCGAGCAAGAGAATGTGAAGTTACGTCGAAATGCTAGTCACTTAACTAACCTAACAGCTCAAACCAATAAAAAGCTTGAAGAAGCAGAAAAAC
CCTAA
Protein sequenceShow/hide protein sequence
MSVNVPIESIRYDEPMIALQWAEYEVALPSSCQVQLVPNELGRLKTIWEGLTPDRRFILILLALCIYGTTLYPKAKGYVDGHVAKLFVKIERGVNPVIPLLAETFRALNY
CRAIKKGKLRCCVPLLYIWMHNHFNLVNGLQSKHKMLERNQDLEQENVKLRRNASHLTNLTAQTNKKLEEAEKP