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Tan0002203 (gene) of Snake gourd v1 genome

Gene IDTan0002203
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationLG09:44469366..44469641
RNA-Seq ExpressionTan0002203
SyntenyTan0002203
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-1368.75Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P  E NMEEQ+  R+ QRL   + SAQ+DPEKKY IERLKALGATTF GTT+PADAE
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.7e-1262.5Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P+ E N+EEQ+  R+ QRL   + SAQ+DPEKKY  ERLKALGATTF GTT+P D E
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.7e-1262.5Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P+ E N+EEQ+  R+ QRL   + SAQ+DPEKKY  ERLKALGATTF GTT+P D E
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

WP_217833179.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]2.4e-1978.46Show/hide
Query:  VSEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        +SEGESSHPQ EVN+EEQ+FTRI QRLA S+GS ++DPEKKY IERLKALGATTFEGT DP +AE
Subjt:  VSEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]2.2e-1276.92Show/hide
Query:  MEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAEV
        ME+++F RITQRLA SVGS Q DPEKK+ IERLKALGATTF+GTTDP DAE+
Subjt:  MEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAEV

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein5.8e-1162.5Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P  E N+EEQ+  R+ QRL   +  AQ+D EKKY IERLKALGATTF GTT+P DAE
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

A0A5A7SKG0 Uncharacterized protein1.4e-0955.22Show/hide
Query:  RVVSEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        R  + G+S+H   + NMEE++F +I QRLA+ V  AQAD EKKY IER+KALGAT F+GT D  + E
Subjt:  RVVSEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

A0A5A7T1M0 Reverse transcriptase1.8e-1262.5Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P+ E N+EEQ+  R+ QRL   + SAQ+DPEKKY  ERLKALGATTF GTT+P D E
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

A0A5D3BB91 Reverse transcriptase1.8e-1262.5Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P+ E N+EEQ+  R+ QRL   + SAQ+DPEKKY  ERLKALGATTF GTT+P D E
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

A0A5D3DES5 DNA/RNA polymerases superfamily protein7.3e-1468.75Show/hide
Query:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE
        S+ ESS P  E NMEEQ+  R+ QRL   + SAQ+DPEKKY IERLKALGATTF GTT+PADAE
Subjt:  SEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAGGTGGAAAACGAGGCAGGCAAGTGGAGGTCCGAACTCAAGAAGCTACTGGTGATAGAAAAAGAGTGGTATCAGAGGGAGAGTCTAGTCATCCTCAGCAAGA
GGTGAACATGGAGGAACAAATGTTTACGAGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAATATGACATTGAAAGACTGAAAG
CCTTAGGTGCAACAACATTTGAAGGCACGACAGATCCCGCTGATGCTGAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGAGGTGGAAAACGAGGCAGGCAAGTGGAGGTCCGAACTCAAGAAGCTACTGGTGATAGAAAAAGAGTGGTATCAGAGGGAGAGTCTAGTCATCCTCAGCAAGA
GGTGAACATGGAGGAACAAATGTTTACGAGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAATATGACATTGAAAGACTGAAAG
CCTTAGGTGCAACAACATTTGAAGGCACGACAGATCCCGCTGATGCTGAGGTTTAG
Protein sequenceShow/hide protein sequence
MARGGKRGRQVEVRTQEATGDRKRVVSEGESSHPQQEVNMEEQMFTRITQRLAESVGSAQADPEKKYDIERLKALGATTFEGTTDPADAEV