| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 59.97 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
VHRGDVIVTQI S HNVADPFTKPLTAKVFEGHLESLGLR +P+
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 59.97 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
VHRGDVIVTQI S HNVADPFTKPLTAKVFEGHLESLGLR +P+
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 59.79 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS FILNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAK
VHRGDVIVTQI S HNVADPFTKPLTAK
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAK
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 59.9 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN NT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
VHRGDVIVTQI S HNVADPFTKPLTAKVFEGHLESLGLR +P+
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 59.71 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAK
VHRGDVIVTQI S HNVADPFTKPLTAK
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SMH8 Gag/pol protein | 0.0e+00 | 59.97 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
VHRGDVIVTQI S HNVADPFTKPLTAKVFEGHLESLGLR +P+
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
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| A0A5A7TWB9 Gag/pol protein | 0.0e+00 | 59.79 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS FILNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAK
VHRGDVIVTQI S HNVADPFTKPLTAK
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAK
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| A0A5A7TZD7 Gag/pol protein | 0.0e+00 | 59.9 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN NT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
VHRGDVIVTQI S HNVADPFTKPLTAKVFEGHLESLGLR +P+
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
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| A0A5D3CPJ6 Gag/pol protein | 0.0e+00 | 59.97 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
VHRGDVIVTQI S HNVADPFTKPLTAKVFEGHLESLGLR +P+
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLPN
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| A0A5D3CSZ6 Gag/pol protein | 0.0e+00 | 59.71 | Show/hide |
Query: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
M+S+ + +LA+DKL +N+ +WKN INT+L+ DDL+FVL EECPQ+P++ A+R+VR+ Y++W +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ
Subjt: MSSSIIVLLASDKLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQN
Query: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
MFGQ S+Q++ D+LK+++NARM EG SVRE+VL++M HFN+ EMNGA IDE+S QFRSN VMNKI+YTLTTLLNELQ F+SLM+I+
Subjt: MFGQQSFQVRQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESS--------------QFRSNVVMNKISYTLTTLLNELQNFQSLMRIRT
Query: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
+ EANVA R +H+GSTSG KS+ S K K KKG KA+ AAA+ KK K A K CFHCN++ HWKRNCPK+L EKK QGK DLLV +T
Subjt: PEAEANVA--YRSYHKGSTSGIKSVAPSRPKGKKKMKKG----KADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEKK--NQGKCDLLVTKT
Query: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
CLVE+ DSAWI+DSGATNHVCSSFQ I SW+QL GE+T+ VG+ +VSA A+G ++L +++LL+N+Y+VP RNL+S+ LLEQ S++FN NK
Subjt: CLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLF---NYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKA
Query: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
FI +N T+ KR+K+ PKENAHLWHL LGHINLNRIERLVK+GLL +LEENSLPVCESCLEGKMTKRP
Subjt: FISRNE---------------------------------TRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRP
Query: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
F+GK +RAKEPLEL+HSDLCGPMNVK RGG+EYF+ F DDYSRY Y+YLM K E LEKFKEYK E+EN L KTI T RSD+GGEYMD +FQ+Y++E GI
Subjt: FSGKRYRAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGI
Query: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
SQLSAPG PQQNGVSERRNRTLLDMVRS+MSYA LP+SFWGYAV+TAVYILN VPS SV ETP +LWNGRKGSL HFRIWG AHVL +NPKKLEPRSK
Subjt: TSQLSAPGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
Query: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
LCLFVGYPK TRG F+DPK+N+V VSTNATFLEEDH+R+H PR KIVLNE+ S RV + S T VV +S++ + Q L PRRSGR V N
Subjt: LCLFVGYPKVTRGDLFFDPKENRVLVSTNATFLEEDHVRDHLPRRKIVLNEMD----STSARVADGASTPTSVVDSSTSSQV-RSQELGMPRRSGRAVDN
Query: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
L D+WIKAM+ ++E MYFNSVW+LVDQPD W TFKARLVAKG+TQVEG
Subjt: L---------------------------------NDQWIKAMDQQMELMYFNSVWELVDQPD--------W-------------TFKARLVAKGFTQVEG
Query: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
+YEETFSPVAM VD
Subjt: FNYEETFSPVAM-------------------------------------------------------------------------------------NVD
Query: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
EPCVYK+I++K+VAFL+LYVDDILLIG ++G LTD+K+WLA+QFQMKDLGEAQ+VLGIQI R+RKN+MLA+ QASYIDK++ +Y MQNSK+GLLPFRHGV
Subjt: EPCVYKKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGV
Query: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
+ P++ D E + + RPDI YAVGIVS YQS PGL HWT VK+ LKYLRRTR+Y+L+YG DLILTGYTDSDFQTD+DS
Subjt: --EGNRSPRSGSDCESRALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDS
Query: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
RKSTSGS F LNGG VVWRSIKQGCIADSTMEAEYV ACEAAKE VWLR F+ DLEVVPNM+ ITL+CDNSGAVANS+EPRSHKRGKHIE+KYHLIREI
Subjt: RKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREI
Query: VHRGDVIVTQIVSEHNVADPFTKPLTAK
VHRGDVIVTQI S HNVADPFTKPLTAK
Subjt: VHRGDVIVTQIVSEHNVADPFTKPLTAK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.2e-91 | 23.48 | Show/hide |
Query: DNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQVRQDSLKH
+ + WK I +L D+ V+ P + D W +A AK II LS+ ITA++I+E+L ++ ++S + K
Subjt: DNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQVRQDSLKH
Query: VFNARMKEGTSVREYVLDIMTHFNLVE-------MNGASIDESSQFRSNVVMNKISYTLTTL-------LNELQNFQ----SLMRIRTPEAEANVAYRSY
+ + ++ S +++HF++ + GA I+E M+KIS+ L TL + ++ +L ++ + + ++
Subjt: VFNARMKEGTSVREYVLDIMTHFNLVE-------MNGASIDESSQFRSNVVMNKISYTLTTL-------LNELQNFQ----SLMRIRTPEAEANVAYRSY
Query: HKGSTSGIKSVAPSRPKGKKKMKKGKADRAAAQKDKKV--KEVAEKEKCFHCNEDDHWKRNC--PKFLVEKKNQGKCDLLVTKTC-----LVES------
H ++ K V + K + K KK+ K KC HC + H K++C K ++ KN+ + T T +V+
Subjt: HKGSTSGIKSVAPSRPKGKKKMKKGKADRAAAQKDKKV--KEVAEKEKCFHCNEDDHWKRNC--PKFLVEKKNQGKCDLLVTKTC-----LVES------
Query: -SDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSE-EIVSAAAIGKVKLFN--YILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKAFISR
+ ++LDSGA++H+ + + +Y+ + + V + E + A G V+L N I L+++ NL+S+ L E +S+ F+ + IS+
Subjt: -SDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSE-EIVSAAAIGKVKLFN--YILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKAFISR
Query: N-----------------ETRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGL-----LCQLEENSLPVCESCLEGKMTKRPFSGKRYRA--KEPLE
N + I K N LWH GHI+ ++ + + + L E S +CE CL GK + PF + + K PL
Subjt: N-----------------ETRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGL-----LCQLEENSLPVCESCLEGKMTKRPFSGKRYRA--KEPLE
Query: LIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQN
++HSD+CGP+ T YFV F+D ++ Y YL+ K + F+++ + E ++ L D G EY+ E + + ++ GI+ L+ P PQ N
Subjt: LIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQN
Query: GVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCE---TPFELWNGRKGSLHHFRIWGYSAHVLVSNPK-KLEPRSKLCLFVGYPK
GVSER RT+ + R+++S A+L SFWG AV TA Y++N +PS ++ + TP+E+W+ +K L H R++G + +V + N + K + +S +FVGY
Subjt: GVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCE---TPFELWNGRKGSLHHFRIWGYSAHVLVSNPK-KLEPRSKLCLFVGYPK
Query: -------------VTRGDLFFD----------------------------PKENRVLVST----------NATFLEEDHVRDHL----PRRKIVLNEMDS
+ D+ D P ++R ++ T N FL++ ++ RKI+ E +
Subjt: -------------VTRGDLFFD----------------------------PKENRVLVST----------NATFLEEDHVRDHL----PRRKIVLNEMDS
Query: TSARV-------------------------------ADGASTPTSVVDSSTSSQVRSQELGMP----------RRSGRA---------------------
S + G+ P +S T+ ++ + P RRS R
Subjt: TSARV-------------------------------ADGASTPTSVVDSSTSSQVRSQELGMP----------RRSGRA---------------------
Query: -------VDNLNDQ---------WIKAMDQQMELMYFNSVWELVDQPD--------WTF-------------KARLVAKGFTQVEGFNYEETFSPVA---
V N D+ W +A++ ++ N+ W + +P+ W F KARLVA+GFTQ +YEETF+PVA
Subjt: -------VDNLNDQ---------WIKAMDQQMELMYFNSVWELVDQPD--------WTF-------------KARLVAKGFTQVEGFNYEETFSPVA---
Query: -------------------------------------------MNVDEPCVYKKI----------------------------VDKTV-----------A
N D C K VD+ +
Subjt: -------------------------------------------MNVDEPCVYKKI----------------------------VDKTV-----------A
Query: FLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEGNRSPRSGSDCES
+++LYVDD+++ ++ + + K++L +F+M DL E ++ +GI+I + + + Q++Y+ K+LS++ M+N P + S DC +
Subjt: FLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEGNRSPRSGSDCES
Query: RALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGG---DLILTGYTDSDFQTDKDSRKSTSGSTF-ILN
L+ + + + RPD+ AV I+S Y S + W +K L+YL+ T + L++ + + GY DSD+ + RKST+G F + +
Subjt: RALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGG---DLILTGYTDSDFQTDKDSRKSTSGSTF-ILN
Query: GGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREIVHRGDVIVTQIV
++ W + +Q +A S+ EAEY+ EA +E +WL+ +T + + + I ++ DN G ++ + P HKR KHI+ KYH RE V + + I
Subjt: GGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREIVHRGDVIVTQIV
Query: SEHNVADPFTKPLTAKVFEGHLESLGL
+E+ +AD FTKPL A F + LGL
Subjt: SEHNVADPFTKPLTAKVFEGHLESLGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-125 | 26.55 | Show/hide |
Query: DNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQVRQDSLKH
+ F TW+ + +L+ L VL + + + A + W +E+A I LS+ + TA+ I L++++ ++ + K
Subjt: DNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQVRQDSLKH
Query: VFNARMKEGTSVREYVLDIMTHFN--LVEMNGASIDESSQFRSNVVMNKISYTLTTLLNELQNFQSLMRIRTPEAEANVAYRSYHKGSTSGIKSVAPSRP
++ M EGT+ L + FN + ++ + + ++ +++N + + L + + ++ + ++ + + + K G + R
Subjt: VFNARMKEGTSVREYVLDIMTHFN--LVEMNGASIDESSQFRSNVVMNKISYTLTTLLNELQNFQSLMRIRTPEAEANVAYRSYHKGSTSGIKSVAPSRP
Query: KGKKKMKKGKADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEK------KNQGKCDLLV------------TKTCL-VESSDSAWILDSGAT
+ ++ R+ A+ K + + C++CN+ H+KR+CP K KN +V + C+ + +S W++D+ A+
Subjt: KGKKKMKKGKADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKFLVEK------KNQGKCDLLV------------TKTCL-VESSDSAWILDSGAT
Query: NHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIG----KVKLFNYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKAFISRNETR-TKRIKVL
+H ++ R + + T+ +G+ A IG K + ++L ++ VP NL+S I++ +G +++ + + R TK V+
Subjt: NHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIG----KVKLFNYILLDNMYIVPGFTRNLVSIYYLLEQCISVSFNGNKAFISRNETR-TKRIKVL
Query: PKENAH-------------------------LWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRPFSGKRYRAKEPLELIHSDLCGPM
K A LWH +GH++ ++ L K L+ + ++ C+ CL GK + F R L+L++SD+CGPM
Subjt: PKENAH-------------------------LWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRPFSGKRYRAKEPLELIHSDLCGPM
Query: NVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQNGVSERRNRTL
+++ GG +YFV FIDD SR +++Y++ K + + F+++ +E G+ + LRSD GGEY EF++Y HGI + + PG PQ NGV+ER NRT+
Subjt: NVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQNGVSERRNRTL
Query: LDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVC-ETPFELWNGRKGSLHHFRIWGYS--AHVLVSNPKKLEPRSKLCLFVGYPKVTRGDLFFDPK
++ VRS++ A+LP SFWG AV+TA Y++N PS + E P +W ++ S H +++G AHV KL+ +S C+F+GY G +DP
Subjt: LDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVC-ETPFELWNGRKGSLHHFRIWGYS--AHVLVSNPKKLEPRSKLCLFVGYPKVTRGDLFFDPK
Query: ENRVLVSTNATFLEEDHVRDHLPRRKIVLN-----------------EMDSTSARVADGASTPTSVVDSSTSSQVRSQELGMP----------RRS----
+ +V+ S + F E VR + V N +ST+ V++ P V++ +E+ P RRS
Subjt: ENRVLVSTNATFLEEDHVRDHLPRRKIVLN-----------------EMDSTSARVADGASTPTSVVDSSTSSQVRSQELGMP----------RRS----
Query: ----------------GRAVDNLND--------QWIKAMDQQMELMYFNSVWELVDQP--------DWTF-------------KARLVAKGFTQVEGFNY
R ++L + Q +KAM ++ME + N ++LV+ P W F KARLV KGF Q +G ++
Subjt: ----------------GRAVDNLND--------QWIKAMDQQMELMYFNSVWELVDQP--------DWTF-------------KARLVAKGFTQVEGFNY
Query: EETFSPV------------AMNVD-------------------------------------------------------------------------EPC
+E FSPV A ++D +PC
Subjt: EETFSPV------------AMNVD-------------------------------------------------------------------------EPC
Query: VY-KKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEG
VY K+ + L+LYVDD+L++GK+ G + +K L+ F MKDLG AQ +LG++IVR R +R L + Q YI+++L R+ M+N+K P ++
Subjt: VY-KKIVDKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEG
Query: NRSPRSGSDCESRALDLVTMVREEGG--FPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDSRK
++ + E + V G + + RPDI +AVG+VS + PG +HW VK L+YLR T L +GG D IL GYTD+D D D+RK
Subjt: NRSPRSGSDCESRALDLVTMVREEGG--FPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGGGDLILTGYTDSDFQTDKDSRK
Query: STSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREIVH
S++G F +GG + W+S Q C+A ST EAEY+ A E KE +WL++F+ +L + ++CD+ A+ SK H R KHI+ +YH IRE+V
Subjt: STSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIREIVH
Query: RGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGL
+ V +I + N AD TK + FE E +G+
Subjt: RGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGL
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 1.3e-24 | 25.71 | Show/hide |
Query: NETRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLP-------VCESCLEGKMTK-RPFSGKRYR---AKEPLELIHSDLCGPMNVK
N ++K + P L H MLGH N I++ +K + L+E+ + C CL GK TK R G R + + EP + +H+D+ GP++
Subjt: NETRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLP-------VCESCLEGKMTK-RPFSGKRYR---AKEPLELIHSDLCGPMNVK
Query: TRGGYEYFVFFIDDYSRYVYIYLMHKKFE--TLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQNGVSERRNRTLL
+ YF+ F D+ +R+ ++Y +H + E L F I+N ++ ++ D+G EY + + GIT+ + + +GV+ER NRTLL
Subjt: TRGGYEYFVFFIDDYSRYVYIYLMHKKFE--TLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQNGVSERRNRTLL
Query: DMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSN---PKKLEPRSKLCLFVGYPKVTRGDLFFDPKE
+ R+++ + LP+ W AVE + I N++ S ++ + + L I + V+V+N K+ PR + + + G + + P
Subjt: DMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSVCETPFELWNGRKGSLHHFRIWGYSAHVLVSN---PKKLEPRSKLCLFVGYPKVTRGDLFFDPKE
Query: NRVLVSTNATFLEED
+ + +TN L+++
Subjt: NRVLVSTNATFLEED
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-69 | 21.86 | Show/hide |
Query: KLLRDNFQTWKNNINTILVTDDLKFVL---TEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQV
KL N+ W ++ + +L L T P + A+ V Y +W R ++ ++ ++S + TA +I E+L+ ++ S+
Subjt: KLLRDNFQTWKNNINTILVTDDLKFVL---TEECPQLPSSTASRSVRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQV
Query: RQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESSQFR--------------SNVVMNKISYTLTTLLNELQNFQS-LMRIRTPEAEANVA
L+ K ++ +Y+ ++T F+ + + G +D Q + TLT + L N +S ++ + + A
Subjt: RQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASIDESSQFR--------------SNVVMNKISYTLTTLLNELQNFQS-LMRIRTPEAEANVA
Query: YRSYHKGSTSGIKSVAPSRPKGKKKMKKGKADRAAAQKDKKVKEVAEKE-----KCFHCNEDDHWKRNCPK---FLVEKKN----------QGKCDLLVT
H+ +T+ + +R + Q + KC C H + C + FL + Q + +L +
Subjt: YRSYHKGSTSGIKSVAPSRPKGKKKMKKGKADRAAAQKDKKVKEVAEKE-----KCFHCNEDDHWKRNCPK---FLVEKKN----------QGKCDLLVT
Query: KTCLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLFNY---ILLDNMYIVPGFTRNLVSIYYLLE-QCISVSFNG
S + W+LDSGAT+H+ S F + S Q G + V + + G L + L N+ VP +NL+S+Y L +SV F
Subjt: KTCLVESSDSAWILDSGATNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKLFNY---ILLDNMYIVPGFTRNLVSIYYLLE-QCISVSFNG
Query: NKAFISRNETRTKRIKVLPKENAH-----------------------LWHLMLGHINLNRIERLVKSGLLCQLE-ENSLPVCESCLEGKMTKRPFSGKRY
+ T ++ K+ + WH LGH + + ++ + L L + C CL K K PFS
Subjt: NKAFISRNETRTKRIKVLPKENAH-----------------------LWHLMLGHINLNRIERLVKSGLLCQLE-ENSLPVCESCLEGKMTKRPFSGKRY
Query: RAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSA
+ PLE I+SD+ + + Y Y+V F+D ++RY ++Y + +K + E F +K +EN I T SD GGE++ +Y +HGI+ S
Subjt: RAKEPLELIHSDLCGPMNVKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSA
Query: PGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSV-CETPFELWNGRKGSLHHFRIWGYSAHVLVS--NPKKLEPRSKLCL
P P+ NG+SER++R +++ +++S+A +P ++W YA AVY++N +P+ + E+PF+ G + R++G + + + N KL+ +S+ C+
Subjt: PGMPQQNGVSERRNRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSV-CETPFELWNGRKGSLHHFRIWGYSAHVLVS--NPKKLEPRSKLCL
Query: FVGYPKVTRGDLFFDPKENRVLVSTNATFLE---------------EDHVRDH---------LPRRKIVL------------------------------
F+GY L + +R+ +S + F E ++ R+ LP R VL
Subjt: FVGYPKVTRGDLFFDPKENRVLVSTNATFLE---------------EDHVRDH---------LPRRKIVL------------------------------
Query: ----------------------------------------------NEMDSTSARVADGASTP-----------TSVVDSSTS-----------------
N + + +++A STP TS SSTS
Subjt: ----------------------------------------------NEMDSTSARVADGASTP-----------TSVVDSSTS-----------------
Query: ------SQVRSQELGMPRRSG---------------------RAVDNLNDQ-WIKAMDQQMELMYFNSVWELVDQPD---------WTF-----------
+ + + +G ++G A+ L D+ W AM ++ N W+LV P W F
Subjt: ------SQVRSQELGMPRRSG---------------------RAVDNLNDQ-WIKAMDQQMELMYFNSVWELVDQPD---------WTF-----------
Query: --KARLVAKGFTQVEGFNYEETFSPVA---------------------------------------------MNVDEP---CVYKKIV------------
KARLVAKG+ Q G +Y ETFSPV ++ D P C +K +
Subjt: --KARLVAKGFTQVEGFNYEETFSPVA---------------------------------------------MNVDEP---CVYKKIV------------
Query: -------------------------DKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRY
K++ ++++YVDDIL+ G + L + L+ +F +KD E Y LGI+ R L + Q YI +L+R
Subjt: -------------------------DKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRY
Query: KMQNSKKGLLPFRHGVEGNRSPRSGSDCESRALDLVTMVREEGGFP-LGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSL-MYGGGDL
M +K P SP+ ++ D G L RPDI YAV +S + P +H +K L+YL T N+ + + G L
Subjt: KMQNSKKGLLPFRHGVEGNRSPRSGSDCESRALDLVTMVREEGGFP-LGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSL-MYGGGDL
Query: ILTGYTDSDFQTDKDSRKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSH
L Y+D+D+ DKD ST+G L + W S KQ + S+ EAEY + E W+ +T+L + + ++CDN GA P H
Subjt: ILTGYTDSDFQTDKDSRKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSH
Query: KRGKHIEQKYHLIREIVHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLP
R KHI YH IR V G + V + + +AD TKPL+ F+ +G+ +P
Subjt: KRGKHIEQKYHLIREIVHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.4e-66 | 21.5 | Show/hide |
Query: KLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRS---VRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQV
KL N+ W ++ + +L L P P++ + + V Y +W R ++ I+ ++S + TA +I E+L+ ++ S+
Subjt: KLLRDNFQTWKNNINTILVTDDLKFVLTEECPQLPSSTASRS---VRDAYDQWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQNMFGQQSFQV
Query: RQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASI-DESSQFRSNVVMNKISYTLTTLLNELQNFQS-LMRIRTPEA---EAN-VAYRSYHKGST
HV R + M H VE ++ D+ + +LT + L N +S L+ + + E AN V +R+ +
Subjt: RQDSLKHVFNARMKEGTSVREYVLDIMTHFNLVEMNGASI-DESSQFRSNVVMNKISYTLTTLLNELQNFQS-LMRIRTPEA---EAN-VAYRSYHKGST
Query: SGIKSVAPSRPKGKKKMKKGKADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKF--LVEKKNQGKCDLLVT-----KTCLVESSDSA--WILDSGA
+ + + + + ++ D + + +C C+ H + CP+ NQ + T V S +A W+LDSGA
Subjt: SGIKSVAPSRPKGKKKMKKGKADRAAAQKDKKVKEVAEKEKCFHCNEDDHWKRNCPKF--LVEKKNQGKCDLLVT-----KTCLVESSDSA--WILDSGA
Query: TNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKL---FNYILLDNMYIVPGFTRNLVSIYYLLE-QCISVSFNGNKAFISRNETRTKRIKVL
T+H+ S F + S+ Q G + + + G L + L+ + VP +NL+S+Y L +SV F + T ++
Subjt: TNHVCSSFQRIYSWQQLREGEVTLWVGSEEIVSAAAIGKVKL---FNYILLDNMYIVPGFTRNLVSIYYLLE-QCISVSFNGNKAFISRNETRTKRIKVL
Query: PKENAH-----------------------LWHLMLGHINLNRIERLVKSGLLCQLE-ENSLPVCESCLEGKMTKRPFSGKRYRAKEPLELIHSDLCGPMN
K+ + WH LGH +L + ++ + L L + L C C K K PFS + +PLE I+SD+
Subjt: PKENAH-----------------------LWHLMLGHINLNRIERLVKSGLLCQLE-ENSLPVCESCLEGKMTKRPFSGKRYRAKEPLELIHSDLCGPMN
Query: VKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQNGVSERRNRTLL
+ + Y Y+V F+D ++RY ++Y + +K + + F +K+ +EN I TL SD GGE++ +DY+ +HGI+ S P P+ NG+SER++R ++
Subjt: VKTRGGYEYFVFFIDDYSRYVYIYLMHKKFETLEKFKEYKTEIENLLGKTIITLRSDQGGEYMDTEFQDYMIEHGITSQLSAPGMPQQNGVSERRNRTLL
Query: DMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSV-CETPFELWNGRKGSLHHFRIWGYSAHVLVS--NPKKLEPRSKLCLFVGYPKVTRGDLFFDPKE
+M +++S+A +P ++W YA AVY++N +P+ + ++PF+ G+ + +++G + + + N KLE +SK C F+GY L
Subjt: DMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSV-CETPFELWNGRKGSLHHFRIWGYSAHVLVS--NPKKLEPRSKLCLFVGYPKVTRGDLFFDPKE
Query: NRVLVSTNATFLEE---------------------------------------------DHV--------------------------------------
R+ S + F E H+
Subjt: NRVLVSTNATFLEE---------------------------------------------DHV--------------------------------------
Query: --------------------------------------------------RDHLPRRKIVLNEMDSTSA-------------------------------
H+P ++E +S S+
Subjt: --------------------------------------------------RDHLPRRKIVLNEMDSTSA-------------------------------
Query: --RVADGASTPTSVVDSSTSSQVRSQELGMPRRSGRAVDNLNDQWIKAMDQQMELMYFNSVWELVDQPD---------WTF-------------KARLVA
R DG P +TS S+ PR + +A+ +D+W +AM ++ N W+LV P W F KARLVA
Subjt: --RVADGASTPTSVVDSSTSSQVRSQELGMPRRSGRAVDNLNDQWIKAMDQQMELMYFNSVWELVDQPD---------WTF-------------KARLVA
Query: KGFTQVEGFNYEETFSPVAMNV------------------------------------------------DEPCVYKKIV--------------------
KG+ Q G +Y ETFSPV + D C +K +
Subjt: KGFTQVEGFNYEETFSPVAMNV------------------------------------------------DEPCVYKKIV--------------------
Query: -----------------DKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKG
+++ ++++YVDDIL+ G + L L+ +F +K+ + Y LGI+ R + L + Q Y +L+R M +K
Subjt: -----------------DKTVAFLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKG
Query: LLPFRHGVEGNRSPRSGSDCESRALDLVTMVREEGGFP-LGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSL-MYGGGDLILTGYTDS
P SP+ ++ D G L RPD+ YAV +S Y P DHW +K L+YL T ++ + + G L L Y+D+
Subjt: LLPFRHGVEGNRSPRSGSDCESRALDLVTMVREEGGFP-LGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSL-MYGGGDLILTGYTDS
Query: DFQTDKDSRKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQ
D+ D D ST+G L + W S KQ + S+ EAEY + E W+ +T+L + ++ ++CDN GA P H R KHI
Subjt: DFQTDKDSRKSTSGSTFILNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQ
Query: KYHLIREIVHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLP
YH IR V G + V + + +AD TKPL+ F+ +G+ +P
Subjt: KYHLIREIVHRGDVIVTQIVSEHNVADPFTKPLTAKVFEGHLESLGLRVLP
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.2e-30 | 25.54 | Show/hide |
Query: WIKAMDQQMELMYFNSVWELVDQP--------DWT-------------FKARLVAKGFTQVEGFNYEETFSPVAM-------------------------
W AMD ++ M WE+ P W +KARLVAKG+TQ EG ++ ETFSPV
Subjt: WIKAMDQQMELMYFNSVWELVDQP--------DWT-------------FKARLVAKGFTQVEGFNYEETFSPVAM-------------------------
Query: -----NVDEPCVYK-----------------------------------------------------------KIVDKTVAFLILYVDDILLIGKEVGFL
++DE K KI +++YVDDI++ +
Subjt: -----NVDEPCVYK-----------------------------------------------------------KIVDKTVAFLILYVDDILLIGKEVGFL
Query: TDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEGNRSPRSGSDCESRALDLVTMVREEGGFP-LG
++K L S F+++DLG +Y LG++I R+ + + Q Y +L + K +P V S SG D +D R G L
Subjt: TDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEGNRSPRSGSDCESRALDLVTMVREEGGFP-LG
Query: DVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGG-GDLILTGYTDSDFQTDKDSRKSTSGSTFILNGGVVVWRSIKQGCIADSTMEA
R DI +AV +S + P L H V L Y++ T L Y ++ L ++D+ FQ+ KD+R+ST+G L ++ W+S KQ ++ S+ EA
Subjt: DVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSLMYGG-GDLILTGYTDSDFQTDKDSRKSTSGSTFILNGGVVVWRSIKQGCIADSTMEA
Query: EYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIRE
EY A E +WL +F +L++ ++ LFCDN+ A+ + H+R KHIE H +RE
Subjt: EYVPACEAAKETVWLRKFMTDLEVVPNMNLSITLFCDNSGAVANSKEPRSHKRGKHIEQKYHLIRE
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 3.2e-10 | 36.78 | Show/hide |
Query: ETRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRPFSGKRYRAKEPLELIHSDLCGPMNV
ET + K+ LWH L H++ +E LVK G L + +SL CE C+ GK + FS ++ K PL+ +HSDL G +V
Subjt: ETRTKRIKVLPKENAHLWHLMLGHINLNRIERLVKSGLLCQLEENSLPVCESCLEGKMTKRPFSGKRYRAKEPLELIHSDLCGPMNV
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 6.3e-06 | 34.15 | Show/hide |
Query: NRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSV-CETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
NRT+++ VRS++ LP +F A TAV+I+N PS ++ P E+W + + R +G A++ + KL+PR+K
Subjt: NRTLLDMVRSIMSYARLPDSFWGYAVETAVYILNNVPSNSV-CETPFELWNGRKGSLHHFRIWGYSAHVLVSNPKKLEPRSK
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 5.5e-18 | 30.8 | Show/hide |
Query: FLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEGNRSPR---SGSD
+L+LYVDDILL G L + L+S F MKDLG Y LGIQI + L+ Q Y +++L+ M + K P + + S SD
Subjt: FLILYVDDILLIGKEVGFLTDVKKWLASQFQMKDLGEAQYVLGIQIVRNRKNRMLAMFQASYIDKMLSRYKMQNSKKGLLPFRHGVEGNRSPR---SGSD
Query: CES--RALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSL-MYGGGDLILTGYTDSDFQTDKDSRKSTSGSTFI
S AL +T+ RPDI YAV IV P L + +K L+Y++ T + L ++ L + + DSD+ +R+ST+G
Subjt: CES--RALDLVTMVREEGGFPLGDVRPDIGYAVGIVSMYQSYPGLDHWTTVKSSLKYLRRTRNYSL-MYGGGDLILTGYTDSDFQTDKDSRKSTSGSTFI
Query: LNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVW
L ++ W + +Q ++ S+ E EY A E W
Subjt: LNGGVVVWRSIKQGCIADSTMEAEYVPACEAAKETVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0e-04 | 36.99 | Show/hide |
Query: WIKAMDQQMELMYFNSVWELVDQP--------DWTF-------------KARLVAKGFTQVEGFNYEETFSPV
W +AM ++++ + N W LV P W F KARLVAKGF Q EG + ET+SPV
Subjt: WIKAMDQQMELMYFNSVWELVDQP--------DWTF-------------KARLVAKGFTQVEGFNYEETFSPV
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